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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40317_c0_seq6
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		hypothetical_protein_KGM_00713_[Danaus_plexippus]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016032 P viral process
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:2.09 TPM:1.65
ORF EntryO_BomoMG17503_5prime_partial:A_BomoMG_comp40317_c0_seq6
Sequence
(Nucleotide)
GGTACCACCGCCGTGGTTGATCGCGCAGCAGCGGTACGGGCCGCCGCCCTCGTACCCGAA
CCTCAAGATCCCCGGCCTCAACGCGCCCATACCCGAGGGGTGCGCCTTCGGCTACCACGC
CGGGGGGTGGGGCAAACCGCCCGTCGACGAAATGGGAAAACCGCTCTACGGAGATGTCTT
CGGACATCAGACGAGTGGACAAGATGACGGCGAAGACGTGGACATCGACAGGACAATGTG
GGGCGAACTGGAGTCTGAATCAGAAGAAGAGTCGGAGGAGGAGGAATCGGGCGAGGAGGG
CGAGGCAGAGATGGGCGGGGTCGGCACTCCCGCGGAGGGACTCGCCACGCCGCTCGGACT
CAGCTCCGTGCCGCCCGGACTCGAGACTCCCGACAGCATTGAACTCAGGAAAAAGAAATT
GGACTCCGATCTTGACGGAGGAGAGACTCCGGCTCTGTACCAAGTACTGCCGGAGCGCCG
CGTGGGGGTGACGTCAGGGATGATGGCGTCCACGCACGTGTACGACATTAACGCAACGAA
CCCCGTGAAGCGAGCGGGCGCGACCTCGACGGGTCACGGCCCGGCGGGCGGCGTGGAGGT
CACGCTGGACCCCTCCGAGCTGGAGCTGGAGCCCGAGGCGGTGGCGGCGCGCTACGAGCG
CCATCTGCGCGACCAGCGACCCAACACCCACGAGGACCTCTCCGACATGCTCGCGGACCA
CGTGGCCAGGCAGAAGAACAAAAGGAAACGTCAACAGAACACGGACTCAAAACATGCGAA
GAAATACAAGGAGTTCAAGTTCTAGTGATTGTAGACTTATCATTACATTTAGTATTAAGT
ATTATTGTGAATAAAGGGATGTGTACTATGCGTTTCAAATAATATTTCAAAGTGACAAAC
GAAATTTGGGTTTTTCTCTCTCTTTTTAAATACAGATTTTGACAAATCAACCGAAAATAG
AAAAAAAATATTTTTTTTTACATTAAGTATTTAAATATTTAATTCATTATTTCTAAATCG
ATAATGTCTGGTTTTAGAAAGGCTCTGATCGTAA
(1054 bp)

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