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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40317_c0_seq4
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		hypothetical_protein_KGM_00713_[Danaus_plexippus]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016032 P viral process
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.44 TPM:1.13
ORF EntryO_BomoMG17493_5prime_partial:A_BomoMG_comp40317_c0_seq4
Sequence
(Nucleotide)
GGACCGCCACCAGGAACTATGGGACCACCACCAGGAACTATGGGACCGCCACCAGGAGCT
ATGGGACCGCCACCGGGATCCATGGGGCCTCCACCAATGGGTCCGCCTGGACCACCACCT
GTTAGCTCGTCTGGTGGACCTCCAAACATGCCGCCGGGAATAGGTCCACCTCCACCAGGA
ATGATGCCTCCGGGAATGGGACCACCGCCAATGGGGCCGCCTGGAATGGGTCCACCTCCA
ATGGGCCCCCCGGGTATGGGACCTCCTGGTATGGGTCCACCCGGTATGGGACCTCCCGGA
ATGGGTCCTCCCGGAATGGGACCTCCAGGAATGGGTCCACCCCGAATGCCACCAAATATG
ATGCGTAATAAGAATAATTATAATAATCAAAATATGGACATGGGACCACCTGGGATGAGA
CCACCTATGGGACCATGGGATGGACCACCAGGCCCACCTGGTCCACCTGGCCCCCCTGGG
CCTGGGTGGGGAATGCAAAGTGATGGTCCGCCAGGATGGAATGATCAAGATGATGATGAT
GAAGAAGAAGAAGAAGAAGATGGGGAAGAAGATTTATCCTCTGACCAACATTCTTCTCTG
CCATCACTCTTGACCATGAAGATTGAAACACCAGAAGAATTTAAAAATAAACAGGGAAAT
GCTGGAGGTGTAGTACTCCCAAAGGCTCTGGAAGAAGCTCTTGCTTACAAAGACCAAAGA
CAAGCAGCTCTTGGTAGTGAAGAAGATAAAGAAACAGATGTGCAAAAAGACATGGAAGCA
CCGCCAGCTCCAGTGATCAGTACGGAGTATGACGTGGAAGAGGATGAACAGTCAGACGAT
GAAAACATTCCTGATCCACCGATGCCACCAGTAATTTCCAAACAAGAGTCCCAAGCTAGC
AAATCCAATAAAAACAAAAGAAAGAAAAAGAAAAAGAAGCTGGCTAAACAGAAACGCAAT
GAAGAGTCTAAGACAAAGAACAACGCACAAGAAGAAAAGAGATCCAGTGACAAAGAAAAT
GAAAAAGAAGCAGATATTGAATACGTGCAAGAAAACATACAGTTTCATGAAATGGAACCA
ATGTACCGTCAGTTCCATCGGATACTGGAAGCATTTAAAATTTCGGAGAAAAAGGAAGAG
ACGATCAAAGATGAGGGTATGGATGCTCCAAAACCAACAAAACATCAGGATAAAGTGCAA
GACCAGTTCGCAGCGGATGATGAGGCAGCTGAGAAAAACGCAGCCGACGAAAAGGAGCGC
CTATCAAAACGCAAACTAAAAAAATTGTCGCGTTTGTCAGTGGCCGAACTGAAGCAGCTA
GTGGCTCGACCCGACGTCGTGGAAATGTACGACGTGACCGCGCGGGATCCCAAACTACTT
GTCCAGCTAAAGGCACACAGGAACACTGTCCAAGTACCCAGACATTGGTGTTACAAGAGG
AAGTACTTGCAAGGAAAACGCGGTATAGAAAAACCTCCCTTCGATCTACCGGACTTTATA
AAGAAGACAGGAATCATGGAAATGAGAGCATCGCTGCAGGACAAAGAAGAGACTAAAACC
CTTAAAGCGAAGATGAGGGAACGTTCTAGACCGAAATTGGGCAAGATCGATATTGACTAC
CAGAAATTGCATGATGCCTTTTTCAAATGGCAAACAAAACCGCGTATGACAATCCACGGA
GATCTGTACTACGAAGGCAAAGAGTTCGAGACTCGTCTGCGCGAGAAGAAGCCCGGAGAT
CTGTCCGAGGAACTGAGAACTGCTCTCGGTATGCCCGTCGGGCCCGGCTCACAGAAGGTA
CCACCGCCGTGGTTGATCGCGCAGCAGCGGTACGGGCCGCCGCCCTCGTACCCGAACCTC
AAGATCCCCGGCCTCAACGCGCCCATACCCGAGGGGTGCGCCTTCGGCTACCACGCCGGG
GGGTGGGGCAAACCGCCCGTCGACGAAATGGGAAAACCGCTCTACGGAGATGTCTTCGGA
CATCAGACGAGTGGACAAGATGACGGCGAAGACGTGGACATCGACAGGACAATGTGGGGC
GAACTGGAGTCTGAATCAGAAGAAGAGTCGGAGGAGGAGGAATCGGGCGAGGAGGGCGAG
GCAGAGATGGGCGGGGTCGGCACTCCCGCGGAGGGACTCGCCACGCCGCTCGGACTCAGC
TCCGTGCCGCCCGGACTCGAGACTCCCGACAGCATTGAACTCAGGAAAAAGAAATTGGAC
TCCGATCTTGACGGGTACCACCGCCGTGGTTGATCGCGCAGCAGCGGTACGGGCCGCCGC
CCTCGTACCCGAACCTCAAGATCCCCGGCCTCAACGCGCCCATACCCGAGGGGTGCGCCT
TCGGCTACCACGCCGGGGGGTGGGGCAAACCGCCCGTCGACGAAATGGGAAAACCGCTCT
ACGGAGATGTCTTCGGACATCAGACGAGTGGACAAGATGACGGCGAAGACGTGGACATCG
ACAGGACAATGTGGGGCGAACTGGAGTCTGAATCAGAAGAAGAGTCGGAGGAGGAGGAAT
CGGGCGAGGAGGGCGAGGCAGAGATGGGCGGGGTCGGCACTCCCGCGGAGGGACTCGCCA
CGCCGCTCGGACTCAGCTCCGTGCCGCCCGGACTCGAGACTCCCGACAGCATTGAACTCA
GGAAAAAGAAATTGGACTCCGATCTTGACG
(2670 bp)

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