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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40311_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_nesprin-1-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:39.67 TPM:31.35
ORF EntryO_BomoMG17433_3prime_partial:A_BomoMG_comp40311_c0_seq1
Sequence
(Nucleotide)
GGCGGGGGCGGGGCGCGCGGGCCGCCGGGCCAGTGCCGCGCCGAGCTTCAGCGCGTACAC
ACCGGACAACTTGCGCAGGGACTGCAGGCGCAGCCGGAGTTCCGCTAGCCTGCGGCAGAT
GTCGTCCGAGTGCGGGGGAGCGTCCTCGGTCCGCAGCAACTGTGCGGCGTCGTGCAGCGC
GTGCACCCGCGGCTCGGCGCGCTGCAGCTCGTCGCGCAGCTCACTGAAGCGTCTGAAGTC
GCGCTGCAGCTCGTCCGCCGGACGCGACAAGCGCAGCGGCTCTCTGCCGCGCACGCCGCG
TTCTGCCGCTGCCAGCTGCGCCACTAACTCGACCACGATATCGTGGAACTGTCTGTTGTG
CACGAGCGCGTGCTGCAGCAGCTTCTGTCGGTCGGCGGCGAGTGCGCATGCGCGGTCCCA
GCGCGCGTTGGCGGCGGCCAGGCGGGCCCGCACGCGCGCCGCGTCACGAGCGTCGTGCGC
ATGCGCCGCCACGTGCCCGCCGACCACGTTCAACGACACCACGATCGACTTGTGCGAGTC
CAGGTCCAGCAGGAACTCGCGGTGGTCCTGTATAGCGTCTTCGAGTAAGTCGTATTGTTC
GGGCGGCTCGGTTCTGGAAGCTTCCGTGGCTTCGGCGAACTGCAGCCACTGCTCCAGCCG
CCAAAGGTCATTGTCCAGCTGTTTCCAGTTCCTCTCCGAGCACAGTGGGCAGGTCAGCCT
ACCAGACTCGTGTTCGCACGTGAGCGCGTATGACGCGGAGTGGGGCAACCTCAGGTTGTT
GATTTGGAGCTCCCTCTTCTTGGCTTGCGTCAACAGGTCTTCGTACCGCAACGAGAGAGA
CTCAACTTCCTTCATCATGGCTTCGTCCTCAGTCGCGTCGCACTCGGTCAGCAGCAGCTC
CGAGAGGTGCTTGGCCAGCTCTAAGGTCTGTCCGGGCTTGGCTCCGGCTTTGGCGATTTC
TTTTGCGGCCGCGGCCAGTTCGTCGCTTCCAGCGTTGTCTTTGAGCTGCTGCTGCAACGC
GAGTTCCAGCACTTCGAGCGCCTCCGAGGTGTCCCTCACGGCCGACGCCAGTTCAGCTCG
GTACGTCTCCTTCGAGGTGAGGGTGTCTACTTGTAGGGCTGCGTCCGTCTCCCATTTTAA
AGTGTCAACTTGAACGGCGGTGTCCACGTCGCCGACGACCTCTGCTCTGGCCAGGTCCAG
TCGCAACCTGACATCCGCATATAAGGCGCGGTACTCTGCGACCATTTCAGAAACGCCTTG
CGCTGTCGAGACTTTAGCAGCCAAGCGATCGGCGTCATCCACTAATGCTTGACATTCAGC
CAGTTCTTTTTCAACCAACTCTAGCTCTTTTAAGGTGGCCTCTTTGTCCAAGGGAGTGGG
AGCAAGATGCAGAGCTCTGGTCAGTCTGACGTCGACTTCGGCCAACGCGACGACTGCTTT
TCCGTGTGCCGCCACGAACTGTCTGTGGACGTCTGCGCCAGCGGCGTCTACCCTGCCCCT
GAGCTGTTGCCAGCGACGGATCGCCGACCGCATCTTGGCAGCTTCGTCTGCCCCTTGGCC
ACGAAGCTCTACGCCTCTTGCAGACGCTACGCGGCTGTATGCGTCCTCTATCCGCTTGAG
GTTGGGTTCTAATGCTTCCAAGTCTTTAATTACGGCCTTCGAAACCGTTTCATCTTCATG
TTCACCACGTTGTTTTCGGGTTTCAATTTTCTCAACTCTCTTCTCGATTGAATCGAGTTT
CTTGACGAATTTAGGTAGAACAGACGAAGATAGTTCGGCAGATTTACGAATTTCTTTCAG
CGTATTCTTGCGATGTTCAGAAGTGTCGCAAATATTTTTCCATTTCTTTTCGACGATGTC
CACTCCGGTTCTTAAGTTTCTGAGATCGAAGTTACCTTTGAGAACATCGGGGTCGTTGAA
CACAAGATCGCAGAGATTCAAAGTTTCACACACCTCTCCACTTTCGGCTTCAATTTCTTT
ATGTGTATCGTCTCGTTCTTTGAATTTCTCATCCACGCTCTTTGTCGTTAGGTATTCTAA
GATAACAGTCGTTGTCAATTTCGACTCTATGACGTGTAGTTTTATTCTGATTTCTGTAAG
CCTCTCTTCGAGCTGTGTTATAGTTTCTAGTAATTCAGTAATTTTCACAATTCTAGATCT
ACCAGTTTCCTGGAGTTTTCGCCATCTTTCTTCCATGTCCTTCAACTGTTTTGACGTGTT
TTTGCTATATGACTTTTCCTCTTTCTTTGCTACCTCTATAAGAGAGCTACCGGTTTCAGA
GAGCCATTCAAATTCACGTTCCTTCATAGCAGTTTCTGCTTGAACATCAGCGTTTAGCCT
TCTGATCAAATCGTGGGGATCTAAAGCGGTGATGTCGCTACTGCTACTGCCCGAAGTCTC
TAAACGCGTTTCGACAGTTGTAATCCATTCCGTGAATCGTTTGAATCGCGTATCAAATAT
GGCGTAAATTTCCAGTCGTTCTTGAAGTCTGTGAATGATGATAGATAGTTGATGTTCAAG
GTCAGCGCGTTGTTGCCTCAGTTGCCATATTCTTTGGTTCACTATTCTCATATCCTGCGG
ACTCAGGCATTCTTTCAACTGTTCCTGGATGACGCTCAAAGCCTCAATCTGCGTTTCGCT
CTTTTCGATCTTTGTCCGTAAATCTGTATATTTATCAATAATTTTTTTGAGTTGCGGTCG
AGATAATTTCTCCTCGTCAGTATATGAACTAATGTCGTCTTGTGTCTTTGAGTACATTTT
GTGTAAATCACTTGTCAAGCGTTCGTATTCACCGATCAGGCCTAGAATTCGAGTTAAGAA
GTCTCTCCATGTGTCGAGGCTAGCTTGCAGATTCTCGACTCTCTTCACACTCCCGGCGTA
TTCCATTTTGACGGAGGCTCCATAAGCTTCCTCAGTAAACTGTAAGACTTTCTTGAGATT
GACTAGAAGTTTATCAGACTGTTTGCGGCCTTCGGGCACTTTGTCAGCGAGATTCTGTAT
TTTGGATAAGATCTTGTGTATCCTCTTCATGTGAACGTATCTGAGTTGCAGCTTTTCTTT
TTCGCGTTCCATTTCTTTAAGCCATCTCAATAGTTCTGTGTAATTCTCTCTATAGTCGTC
CCAGGCTCCGATGCGGGCGCACACTTCATCGTGTCTTTCGACAATTCTCGCTAGGGTTTC
ATTGTGGAGATTAGTAAGGGTGTCGAATTTGTCGGCCAAGTCCTTATTCTTAGTATCCCT
GTTTTCGTTTATTAGGACTGAGCGTTGCGAAGTGAGTAGATTTCTGTGAACCCTGCACAG
ACGTTTGTGCTCTGTTAGGTTTTCGTAATCTGTTGGAACTCCGCTTGACAAGAACGACTG
TAAGTCGATCAAGTACTCGTGCCATAGTCTGAGCGCAGTGGCCGCATCACCAGACCTAAC
CAGGGCGGTCGATAGCCTGTGGTAATGCAAGAATGTGTCTCTGAACATAGCCTGCCATAG
TTCCAAGATCCTAACGATCGAATGTTCTTCGGAAACGTCTCTATCGATGTCGGGCAGTTC
CGCCGTGGCTGGAGCGATGTCCGCTTCACTCTTACCCAGCGCGATAAGGTTTTCTCGTAA
CGCTATCAGTTTGTCTTCAACGATTTCTCCGTCTTCGTGCAGCGGAGCCAAGTCCTGTCT
CATGTCACATAGTTTCTCTTTGGCGTGCTGCGCTTTAGCTCGTGCGCTCTGCCGGGCTTC
GCCCAGATCCGCCAGGACCTGGACAGCGCCGGCGACCAGCTGCAGCCTTCGGGCCAGTGC
GTCAGCGTCGGCCTGGAGAGCCCTAGATCCAGTTTCTGCAGCGACTCTCGCCGCCAATGA
TCGGAGTTCAGCTACCCTGGCTTCTTGTTCCAAGCATGCCTCTTGAAGTGACATTTTCGT
ATAATAAATCACACAGCGAGCCACTGACACATATTTCTTATCGCATCACCATAATAATAA
AGAAAAAACAAAATCATATCACACATTTGACAAGGACAGTTATAAAATATCACAAGTGAT
TAGCGGTGTTTCGATTCACGAGTTTTTAGCTTTGAATTGTTAATTGTCATGGTAATTTGA
GGGTATTTTTGATTTGATTTTTATATTACTATTATTATTTTAAATACAAACTCTTTGTTA
CACCTGATGTCATTCAGTTTCTGATAAACCTAATTCGTAAAAATTTTTCAGAATTGATTT
TTGATAATAGTCACGATCGTGTTCTAAGGTCAGGGCTATTACTGTATAAACAAAGTTTAA
TCGTCTTAATTTTCAAATAAAATTATGCATACGACGAATAAGTTTGTTTCCACCACACAA
CCTGACCTTGTTATTTTACGAGATATATACTTATAGGAGAGTACGCGGATTTTTGCACAA
AAATTAACGCGCCATTATAATGTTAATCGTTTTTCATTTAGTATTCGAGTGTTTTTTCGG
TATTGTTCGTTTTATTTGTTCGCGTTTTCATGTGATCGGCGAAAGCGTCCTCGCG
(4495 bp)

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