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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40253_c1_seq7
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_transcription_factor_GATA-6_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000983 F RNA polymerase II general transcription initiation factor activity
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007350 P blastoderm segmentation
GO:0007389 P pattern specification process
GO:0007391 P dorsal closure
GO:0007398 P ectoderm development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007510 P cardioblast cell fate determination
GO:0008270 F zinc ion binding
GO:0008407 P chaeta morphogenesis
GO:0010002 P cardioblast differentiation
GO:0010906 P regulation of glucose metabolic process
GO:0022416 P chaeta development
GO:0030154 P cell differentiation
GO:0035050 P embryonic heart tube development
GO:0035051 P cardiocyte differentiation
GO:0042440 P pigment metabolic process
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048468 P cell development
GO:0048542 P lymph gland development
GO:0048565 P digestive tract development
GO:0048646 P anatomical structure formation involved in morphogenesis
GO:0060047 P heart contraction
GO:0061320 P pericardial nephrocyte differentiation
Transcript
Level		FPKM:9.03 TPM:7.14
ORF EntryO_BomoMG17038_complete:A_BomoMG_comp40253_c1_seq7
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTCACAGGCAACGATTTTATTTCGTCAACCATTTAAAAAAGT
CTAACATAACCGTGTACCGTGTACACAACGTTATCAAAATATAAATATGTAGACCCAGAT
ACGGCCGCGATCAAACACATTCACGCAACGCACTCACTAAACCTAGACACACACACACAC
ACACGCTCACATACAGTCGCGCACACTAGTATTAACACTAAACAATTTATATATTAATAA
ATTCGTCTCTTTGCTACTATTCTTACTATCATAATACTATACACAAGTTAGTTTTATGTC
ATTTTTAACACGTCAAGAATGTTATGTACAGTGTAGGTAAACTATTCTTATATTTTCTTT
GACTCTAATTTGAAAATTGCTACATTTTGAATACATATATTGAACTGGTAACGTAATATT
TATTCGGCTCTGATGTACCCAGTCGATACAATTTAATGCGTTATGCTTTCACTGGGTTAT
GGTGCGGATGATTGTGGTGATGATATAGCTCGCGGCCCACTCACCGGATGCGACGTGTTG
TTCTATTTAATATCTACCCAATTCCTATTTTCAAAAATTAGTTTACAAGTGTCGCTTAAC
AAAGCTCAAAATAAATACTATATCCACCCACTAACTCGGTCCTTAATCATTTCACATCGA
CTTTCTATAAACGATATCCGTAAAGTAACAATATTTTTAAAATAACATTTACGAATGTTT
TTAAAAAAATATTGTTATAGGTGTTCTCCTTTTTTAGCATTACGTCAGCGGCCCTTAGTA
GAGGGTTATTTTTAGCCATTTTAATTACATTTTTATTCAGATTAATATTATTTTTATCAC
TTATGGCTGATTTATTCAAGAAAACTTCTTAATTGCATACAAAATAAACGACTAAAGTTA
ACTTGAATGAACTGATGACACGATAAGTATTGAAAAGTCAAACATATCGAATGATGACTG
AGACCTCGTTAGGGAGCGACGGCTGCCTCTCAGTTGACTTATAGTATTAGCAATTTGTAT
TCTATCGTGTGTTTACAGAAACTATTCTTGTGTCTTTTTGAAATCGCAGCTTAAAAGAGA
AGTCCTATCGAGCGATGCGATTGTATGTTGAAATCTGGCAGATAAACATCAGTTTTTGCC
GTCAGCCATCAGTCTATAACGCGTTTTTACGAATAATTTCCGCTATTCAATCAATGATAT
CGCGCAATAAATTCAGCACTTAATTCCAAAACCGCCTTATAACATAAGCCTTTATTCAGC
GGATTAAATATCTTTCTGTCCCTACACGAGTTCTGGTTTATGGCTACGATAAATCGTAAT
ACTATAAGAACAAATATATTTTTAGGCCACACTTGTATTGAATAGAAATCACTAGCGAAT
ATGAATGTGTTTGTTAAGTAGGTGTCTTTGGTCAATAACTATGACGTTGGCACTCGAATT
CACCTCATAAATTCTCTTAAAAATACACAATTAAAAGTTAATTCCTTAGTCACTAGTTAA
AATATTAAATCTTATAAGAGAGTTTTGTTCTCGCCTGTACTTATTTATAAATTTTTTTGA
GTTTCCATTCGGAAACTTGCGTATTATGCCGAGCTTGAGCTTGTAGCATTTAAAATTCCT
ACTTGAACTATATTCATAATATTAAGTAACTAATACGATATTTTCCGTATTTAATTTTGT
CTGAACGCTGATTCAAGTTGTCTCCTTGTTGACAAGTTGCTTCAAAATATTTTATAAAAT
ATGGAAATTATCGTAATAATAACGTTGTTGTATTCCTGTTTGTACATTTGCCACGCTACA
TGTGTCTACAGTCTACACTAGTCCTGTGTGCAGGTGGTGCCGTGCGGCGTGGTTAGGGTG
GTCGGTAGTGGGAGGGAGCGCCCGACGAGCCTCTGTCTAACGTTGGTATCATATCGGCTT
GGTGTCTGGGGGCGGGCAGCAGCAGCAGCGGCGCACTCCCTGCGCCGCCGGCCGCCTCCA
CCGCCGCGTACAGCGGAGGCAGCACCTTGTGTGCCTCCACGGAGAGCGAGCCGCCCGGAG
GCCGCGCCACGCCGCCGTGTGCGCCGCCCATGCTCTTCGGTTTCCGCTTCCGGGTCTGAA
TGCCGTCCTTCTTCATGCTGAGGGGCCGGTTCACGTTGTGCAGCTTGAAGTAGAGGCCGC
ACGCGTTGCAGACCGGCTCGCCGTTGTTGTTCCGTCTCCAGAGCGTGGTGTTGGTGGTGC
GGCAGTTCGCGCAGGTCACCCCCATGCGTCGGTTCCCGTTGCTCGGTAAGGCCTGTTGTG
GCTTCGCTTTTTGGCCTTTGAGAGGCGGTCGATTAACTCCGTTGATCCTGGTGTAAAGGC
CGCACGCGTTGCACAGGTAGTGGCCGGTGCCGTCGCGGCGCCACAGCGGCGTGGTCGCGG
CCGCGCAGTTCACGCACTCCTTCACCTCACCCATGCCGGCCATGCTAGGATCGAAGCCGT
CATCAATAGGAAGTAAGTTATGTGCGGGCCAAGCCTGGGTCGGGGCCGGGTAGCCTTCTA
CCAACAACCCACCCTCGTACCCAGACACGGGGACGTATTCCACGCCCCCACTTTGTCCGA
GGTAGTGTTCTCCCCCGACTTTGTATTGAACCGTGTTGCCGTGTGTATACAATGTTACTT
GTTGGGAATTAGGGCTGGGCGGGGCTTCATATACAGTCTGTGACTGTGGCACCACGGAGC
CGTAGACCACGTGAGCACCGCGCGTCGTCAGCGAGGAGGAGGAGAGCGTCGGGTCGCTGC
GGTACAGCAGCTGTCCCGGCGGCGACTCGTCCCCGCGGCCCGCCGGCGCCGACGGTCCCG
AGCCTCCCCCGTACAGCGTCAAGAGCTCCTTGTTACTGCCTCCGTAAGCACTGTAGCTGG
TGCCGCCGTACTGTGGGCTTTGTCCAGCATATGCATATCCTCCGTGGACGGAGGTAACGG
GCTGCAAGCTGGCGTACGTGGTGGGGCGCGGCTCGGGCTCACCGCGCGTTTCGTACTTCA
CTTGTTGATACGCCACGCCGACCGACTGTTGGTTATTTAATGAAGTCGTTTGGATCATCT
CCAGTGCGGTCGAGGCGGCCACTTGTTCGCCAAGCACGGCCGCATATTGTCGGCCGTCTA
CGGGGCCAGCTTCACTGGTTGCAGCGTAAGCTTGAAGTTCGTTTTTATCTTTGTGAGACA
AAAAGGCCTCATGCGCTGGATCTTCTCCTTCCCCCTCTTGAGATACGATCACATGATGGG
GCGCTCCGTAACGCAAGGCGAGTCCGCGACCGTAAGCGGGTCTCTGAGGTGCTCGGGTAT
ACTGCACTGGGAGTCGTTTATCTACAGGGATCGGTGACTGCATGGATCTGTAGGGTTCTT
GCTTGAAGGCGAGATACCTCGCGGTCTCTGCTTCTGCTAGCCTCAGCCGTTCTTCGTCAT
AATGCTGCTGTTGCAGCTCTCTGGTTTCTGCGCTCTCCTCCAGCTTGGGCGCGTACTGTT
GCATCTGTTGCTCGTGTTCCAGCTGGGAGTGCTCGGGCGGCTCGTCCTTGACGCCGTCGT
CGTGTCCGACGTCCCCTGCGTCGTCAGTGGTGATGTGTCCGGCGGCGGTGATGGTGCGCA
CGGTGCGCCGCGACGTGATCACGGACTGTGCCTGCGGCGAGTGCTCGTGCGTGGCGCCCT
GCTGCTCGGGGGCGGCAGACACGACCTCGGCGGCGACGGCCTCGCTGTTCTGTTCGCTCT
CGTGTCTCTCTTCGTTCTTGACGAGCTGCAAGGCTTCCACTGCATGGCTGTTTTCTTCCT
CTCGACGTTCGTCGCTCGCTCGCACTATTTGACCCACGTTGTCCATGTCGACTGCTGCGT
ACCAGCGCGCGTTGCGTTTTCAAGGGTTACACAGAGTATCAGCGGCAGGTTCCAAGCACG
TTTGTATCATTTAATCCAGAAGGCACTAGCGCATTTCGAAACGAAGCTACAAGAACGATC
GGCGAAAATAAAAAAAAAAATAGAGTTGAGAGTGCGATATGATGTGTGCGCCGGTATCGC
GGACTGAATCT
(4031 bp)

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