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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40253_c1_seq11
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_SWI/SNF_complex_subunit_SMARCC2_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.79 TPM:0.62
ORF EntryO_BomoMG17054_complete:A_BomoMG_comp40253_c1_seq11
Sequence
(Nucleotide)
CGAGTACATTAATACTTGATAGTGTTTTCAAAAAAAATCGTATAATTTGTTGATAATTTA
TAGTGTGGAATTGTTAATTGTAAAAAATCATGACTACAATAGGCCCTAAAAAGGATGGTG
GTCCTAATGCTGAATATTTTCAGTCACCCGAAACACTTGCTCAGTTTGATCTAATTCGTG
TTTGGTTACAAAAAAATTGTAAAAAGCATGTTCAAACCGATCCACCAACTAAGGAAGGAT
TAGCCCAACTTGTTGTTCAACTTATTCAATATCAAGAGAGCAAGTTAGGCAAGAATGCAT
CAGATCCACCCTTCCTGAGGCTTCCAATGAAAGTGTTTATGGACATGAAGCCGGGCGGTT
CTCTGTGCACGGTGCTCGCCACCATGTTCCGTTTCAAGTCGGAGCAGCGGTGGCGTAAAT
TCGACTTCCAGAACCCTTCGCGCAAAGATCTGAACGTGCAAATGATGATGGAGATCGAGT
CGGCGTTGCTCGGTGCTGACGTCATCCGCTCGCCCTGCGTCTACATACGTTCGGAAGTCG
ATAAGGCCACCGCTAATAAGGTCAAAGACATCGTTGTCAATCATCAAGGAGAGATATGCG
AAGACGAAGAGGACGCTACGCATATAATCTACCCGACGATGGATCCTCACGAGGAAGAGT
ACGCTCGTCCGGTGTTCAAACGCGGGAACCACGTACTCGTGCACTGGTACTATCTACCAG
ACAGTCACGACACTTGGGCACAGGCTGAACTACCCGTGGATACTCCTGAAGCCGTGAGTT
GGGAGTGCACCCGAAGCGAGCCGTGGCGCGTCACCGCCTCGTGGGCGCTCGACCTGCCGC
AATACAACGAGTGGATGAACGAGGAAGATTACGAGGTCGACGCTAACGGGAAAAAGAAGA
CTCACAAACTGCGCCTGTCCGTGGACGACCTCATTCCGGGCTCGGAGCCGTCCAGCAGGA
GCAAGAAGGGAAGCAAGAGGAAGAGGTCGCCCTCGCCTCCACCACAGAAGCACAGCAAAA
GGAAGAGTCGGTTGGCGAAGCGTCGCGAAAACGACGTGGACGAGGAGGAGGATAACGCTT
CCCGCGACAACACTGACGTCACGCCCGCGCCCGACGCCGAAAAACCGCCGGAGCCGAGCA
CCACCTCAGCTAGCGCCTCGAATGCGAGTGCGAGTGCGAGTGGCAGTGCGAGTGCGAGTG
CGAGTGCGAGTGCATACTCGTACGAGTTCTACGAACTAATTGAATCGATTCATGGAATGT
TTCTGCAAGTCATGGAGTTCATACAAGTCATCAACACTTGAAAGTGAAGACCGAATCTAC
TACAACAGCGGGTTTTAAAACGTCTTAAATCTAATTAAAATTGTATATATTTATTTAAAT
AGCTATCTATTTAGGAATGCACGTTAGGAATGGTTAATGCACAGTCTCATAGGTTTAATG
ATATCGGTAACAAGTAACAGGACCCTAATCGAACCTTTCATTAAAACAACATTTAGCGTC
GCCCGACCAGCCGCCGCTCCCCGCGCAAACTTATTGTTATTATTATGTTACAGTAACGTT
ATAATACGAGTATACACCTATGTATATTCATATTTCATTAATATATAGATTTTAGGCTAA
ATGTAATCATGTCTAGTGAACGTGTATTTGGGCGGCGAGCGGCGAGCGGCGGGCGGCGAG
CGGCGGTCCGAGCGAGGGAGCTCTATCACGCACGTACAAATATACACAACAAACGTACTA
ATTATTATGATGATGTTTGGAGTTGGTCGCGAGGCTCAGCTGGCGAGCGACACGGCGGAG
TGGTCGTGGTGCGGCGCGGCCTTGTGCGGGCCCAGCTCCGGCACTCCGATGTACATGACG
TGGTGCTGCGGCTCCTCCAGCTTCATGCCCTCCGCCGACTGCACGTAGTAGCCCAGGCGC
GGCGGAGAGCGGCGCGCCGACTCCAATATGCTCTCCATCTTGATGCCCGCGGAGACGGCT
CGCTGTACTGCCTTAGCGCTTCTGTCAGCCTTAATATTACTGTTCTTTGGTTTCCGTTTT
CTCGTCTGAATGGAGTCCTTCTTCATGGTGAGAGGTCGGTTGACGTTGTGCAGCTTGAAG
TAGAGGCCGCACGCGTTGCAGACCGTCTCGCCCTGCACGTTGCGGCGCCACAGGGACGTC
GCCGTGGTCTGGCAGTTGGTGCACATCGTGCCCGGTCTTTTGGCGCCCATTTGCAGAGAG
TCGGTCGGCTGCGGAGAGCTGCGGCCGGCGGTTGCTCTCCAGGCTCCACCCCTCCTGGTG
TGCGTACGCGTTGGAGGCCAGAGCTGGCGCTCCGTAGACGGTGGAGGGCCGCGAGGTGGC
GCAGGCGAAGGCGCCGCCGAACCGCGTGTTGAAAGACGGCAGGGACCCCCCGCCCTCCGC
GGCGCTCTCGGCGTATTCGTCCGCCAGTATCGCGTTGCTGCCGTAGCTCGGAGACCCTCC
GGACGCGGTCCAGAGCTGCGGCTGGGCGGAGAGGTCGGCTCCGTTGGTGAAGTATGGCGC
GGCGCTGTTGAAGGCGCACCGCGTGTACACGCTGCTCGCCGCGCCGTTGCCGCCTCCGCC
TTGCTCGAGGTGGTGGTGATGGTCGTGCGAGTAGGGAGGCGGCGGCGCGTAGTGCTCGTA
GTGGAGGGGCGCCGGCGGGCGGTAGTCGTCGCGGCGCTCCGGCGAGGGGCTGAGCTCGGG
ACTCCGGCGCAGGTAGACGCCGTCGGTGGAGGCGGCGCCCGGGGTCGGCGGCTTGAAGAG
CGCGTCGTCGAGGTGCGCGTAGGGCTGCATGTCGCGCGCGTGTGCGGGCCGCAGCTCCTG
GTAGCTGCGCGCCGCCGGCGACAGCCCGCCTCCGGCCCCGGGGGCGTAGCCGCACTCCGC
CGCGCCTTCTGCGACACACACGCGCACCAACTCACTCACACGCGAACATTTCTCTCAACC
TCAACGCAATCGACGCAATCGACGCTCACTCAGCCTTCTCAGAGACTACACTACACTACG
AGTACGAGTATGTAACATCATGAAATTGAATCGTCCAAATGCGAAACGCTCCTCACCGCG
GTCCACTATTATATTATTTTGTACAGTAGGTATACATACTGGTGCAGGGTTACATGTGGC
GGTTCTTTGCGTCACGTTTCGTTGAGACCGTGTTATTTAGAACAAATGACTTTGCCATTC
ATTTTGTCATCTAATGGTAATTATCGTTATTCGTTTCAGAAAATTAGATAGAAAGTTTCC
GATTGTTATCGCGGGTTCTCATTAATAGCTGTTTGTTGTAAATTAGTAGATGAAAGCAAA
GCACGTTAATATTGTTTGGGCACTAATGCGTTGCGGGAGCAGAGAGGCCTAGTGACGAGT
GCGTTGACGACGGCCCATTAGCGTTTACTGCCGAGGTACTTACTGCTGCACTGCGCACCG
ACTCCACGGCAGTCGCCGCGACAATCAGCACTCAGGAGGCTCAGACTCAGTAGGCAGCAC
ATCAAATATTATGAAAGCCGTGCGCCTGTTACTCGGCTAAGGAGACACCTCATCAACGCG
TCGGCATCGCATCTGACGAACGTTACGCACCACACGTTGCCACTGACCAACTGACCAGTG
AGGAGAACATATGGAGGGCCTATAACTAAACAGTTGACGAACTTTGCGATCAGAGACGGT
GCCGCGTCTGATGAACTCTCTCACTGATGGTAAAAGTGCACTAACGTGCAAACGGTTGCT
TACCTTTCATACAGTTGTTGTTGATCTCAGCTATGAGTGTTTCCAAGTCGATAGAGAAGG
CCTTGTCCCAGGAAGAGGG
(3799 bp)

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