SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40252_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin-conjugating_enzyme_E2_W_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
Transcript
Level		FPKM:13.40 TPM:10.59
ORF EntryO_BomoMG17019_complete:A_BomoMG_comp40252_c0_seq1
Sequence
(Nucleotide)
CTTTGGTTCAACCCTTCGAAGTGCAATTATGATTTTTTATTATAGCAACTTCATACGTCT
AATTTCATTACAATGGCGGCTCTGTCTCCGTCCGAGCGGCGTCTTCAAAAAGAACTTATG
TCATTGATGAAAGAACCACCTCCAGGAGTCACCGTAGACGGAGATCAGGCCAGTCAAAAT
CTAACACTATGGACAGTACACATGGAAGGCGTACCTGGAACATTATATGAAGGCGAAAAG
TTCGTGTTGCAGTTCAAATTCACAAACAAATACCCCTTTGATTCCCCTGAAGTAACGTTC
ATAGGCAACAACATTCCCGTTCACCCGCACGTGTACTCGAACGGGCACATCTGCCTTTCG
ATCCTCACCGACGACTGGTCGCCGGCGCTGTCGGTGCAATCAGTCTGCCTCTCGATCGTG
TCGATGCTCAGTAGCTGTAAGGAAAAGAGACGACCGCCTGATAATTCGTTCTACGTTAAA
ACCTGTAATAAAAATCCTAAGAAAACAAAATGGTGGTATCATGATGATTCGGTGTAGCAA
GCCATGCGGTTCATTCTATCGAACATGGATGATTAAATCTCAGTATGTGATAAGTGTTAT
AATAATGAGGATGTACGGTGCGCGAACGAGTCCGGGACGGGGCGCGTCGAACGACGGACT
TATTGTCCTCAACAAGGATCAAAATGTCCGTCACAAACGCGATCATATCGCACATACAGA
GCTATAATGTCACTTATGCGATTCTTGCCTGAGAAAATCAATTTTTTTTATAGTTATTAG
TGAGACGTTTGCTTTTACTGATACTCTTCCCCCTGAAGCTCTTCCCCAACTTACGCAATA
AAAAAAAAAATCTTTAGTAGAGAAGAACTTATATAACAGTAATAAAATGTTGATTTTTCA
AATTCTTCTCCTGAAAAATTACATAATT
(928 bp)

- SilkBase 1999-2023 -