SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40223_c0_seq2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_probable_tyrosyl-DNA_phosphodiesterase_[Amyelois_transitella]
Ontology
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007417 P central nervous system development
GO:0008081 F phosphoric diester hydrolase activity
GO:0016787 F hydrolase activity
GO:0017005 F 3'-tyrosyl-DNA phosphodiesterase activity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.88 TPM:0.70
ORF EntryO_BomoMG16833_complete:A_BomoMG_comp40223_c0_seq2
Sequence
(Nucleotide)
TTAAGTATGAACCCTTCCCTAAAGCGACGAGGAACTATGCAAGAAAATGAGACAAAAAGA
GTAAAAAAGGTTTGTGATTATGGCGAAAAATGCTACAGAATGAATCCTGTACATTTCCGT
GAATTTAGTCATCCGCATTTGGAATCTATATTGGATAACCATGCCAGTGGTGGAGATTAC
CCTATCCCAGATAAATACAATCTCCAGAAGAAATTGATCACTGAACAGCTAGATCTTATA
ATCGAAAAGGGATTCTATGCTCCTCGGAACAATCCCAAAACAAATTGAAAACAAACAAGA
AAGAGACAGCGACAGACGAGTAGGGAAAAATGTGGAACCGGAGGCAAGTTCTGCTAGTCA
TCAAAAAGTACCGGACAAACCTGAAAATACAAAAACAATGTTTTCAAATAATGAAGCCAA
AATTAAGACACCTGTTGATAGAGGGGGAGTTGTTAAAGAGAAATCCACTAACTCAGATTA
TCGTCCCATAATACCTCCGACTCGACGTGTAGAAGATTATTTGAACGTTGTAAGACCTAA
AGGGCGAATGGCTGCAAAGCACGAAGCCAGTGCGCCCTTTTATATTTTTTACACAACAAT
CACGGCGGCAAAGGAAACTCATTCGCAGCCGTTCTCTATAACATTCCAAGAAATTTTAGA
TAGAAGCTTAGGCGAGTTGAAGTGTTCGTTGCAAATCAATTTTATGGTCGAACTTGGATG
GCTCTTGGCTCAGTACTACTTCGCTGGTTACAGCGAGAAGAAGCTAACGATATTGTACGG
TGAGGATTCTCAGGATTTAAGGACGATCAGCCAGAAGAAGCCACACGTTGACGCTCACCT
GGTGCCGATGGCGACTCCGTTCGGTAAACATCACACTAAAATGATGATCTTGTGTTACGA
AGATGGGTCACTTCGCGTTGTAGTATCGACAGCCAATCTGTATATTGATGACTGGGAGAA
CCGAACGCAAGGTCTATGGTTCAGTCCAAAATGCCCAGAGTTGCCGCCGGAAGCGATGCC
TCATGATGGAGAGTCTCCTACGATGTTCAAAAAGTCTCTGTTACGCTATTTGAATCACTA
TCATATGCCTTATCTCACCTACTACGTTGAAAGAGTGAAGAGATCGGATTTCAGTCATAT
TAATGTTTTCTTAGTAGCATCGGCTCCTGGATCTCATTTTGACATGGACTGGGGCATGAC
CCGTGTGGGCTCATTACTGCGGCAGCACTGCTGTATACCACCCGAGGAACAGCTCCAGTG
GCCCCTGGTGGCACAGGCCAGCAGCCTGGGTAGTTACGGCAAGGATCCGAAGCTCTGGTT
GACCGGAGATTTCCTTCACAACTTCACGAAAATCAAGAACCAATCGCAGATGTTGTCGTC
TCCGCCTACTTTGAAACTGATTTATCCATCTTTAGAAAACGTCAAACAATCTCACGACGA
TTTGTTAGGAGGCGGTTGCTTGCCTTACGCAGCCGAAGCGCATTCGAAACAACCTTGGCT
AAATAGCTTTTTATATCAATGGCGAGCTGCGTCCACGAATCGAAACCGGGCGATGCCCCA
CATAAAGTCCTACACCCGGGTGTCGAAGGACGGCAGGAAGGCAGCGTACTACCTGCTCAC
GTCGGGGAACGTCAGCAAGGCGGCCTGGGGCTCGACGAACAAAGGAAACGGAGCGCTCAG
GATAATGAGTTACGAAGCCGGCGTGCTGTTCCTGCCAAAGTTCATTACCAACGAAGATTA
CTTCTGTCTAGAACAAAACGCCCCGAACCGGCTTATCGTGCCATACGACTTACCGCCAGT
CAAATATACGGATGGCATGTCGCCCTGGGTCTCTGATTACCTCATGTGAAGAAGTAGAAG
AAGATTACATCATGATTGACTTGAAGACTCGACACTAGAGGCGCGCTCTCAAATTTCAAT
TCGATCCTAAAACACAGGAAATGGAAATCGATTTCAGAATTAAAAAAAAAGTACACTAGT
GTCGAGAAACAGATTTGGTTTTTGTTCAATAAAATAATTGGTGTTTAAAAAAAA
(2034 bp)

- SilkBase 1999-2023 -