SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40217_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_[Amyelois_transitella]
Ontology
GO:0001669 C acrosomal vesicle
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:41.71 TPM:32.95
ORF EntryO_BomoMG16808_complete:A_BomoMG_comp40217_c0_seq3
Sequence
(Nucleotide)
GCGCGGACTCACAAGAGGTCCTAGCACCAGTAAGAAGAGTTCACGCATTGGGCACAATAC
GCCCTGCCGTAAACAATTATAATATTTGTCTAGCAACAAGCAGCAGCGACGACTGTCTAC
GCAGCGACCGCCTCAGAGCTCGAAGGCGTCACAGGATTGTACTTCAACAACTGTTTCTAT
TGCGAAGAGTCTGCGCTGGCAAGGGACAAAGAAATAGCACAAGCCGTCTACGACATGTCG
CTTAGGCTGATCGAAGATATCTCGAAGACATGATCACGGATAATTTGTGAATTATTGTCG
TACGTTATAAATAAAGTGAAATCGGGCTTAGTCGTGATACGATTAATGTACGGAATTGTT
TTTATAAGGCGAAAGGGATTGACGTCACTTCACATCGTACATTGATGTATCGTAAACTCG
AATAAGAAAAAGGGGCAATAAATGTAAAAATATGTTTTTATTTTTTATTTACTTAGATCC
CCCGTGCAGACTCAGCAAAAAAAGGTATGTACAGCTATAAATACACCCGTCAAATAATTA
AAGCAAATTCCGTAAAATGAAGTGTATGTAATACGCATGTATCAAAATTAAGTACTTTTT
CATAATCTTGTTATTTTTGAGGTTTTCGGTTTATGTTCCTCTCTTGATTTTGGCAACAAG
AGCGTAAGACCGCCGCATACTAAGAGTAATCCGCCGAATAGATAAAAAGTTGCTTCGCAG
GCGGCACGCAGTAATATTCCGGCCACGTTGGTTCCTACGACAGAACCTGTTCGTCCCAAC
ATCATTGATAAACTTACTGCCATTCCTCTCAATTGTGTCGGAAATATCTCAACAGCGTAG
GCATTCACTGGTCCAATGCCCAACCCCATGATCGGCACAGATGATAACAAAACCGCAAAC
AGCATGTCTTCGGTTATGTAATTAATCAGTATGCAAAAAACGCCAATTAAACAGAAAATA
ATAATTAGCAAGTTCTTCTTTCCGACGAATTTGACAGTACTGCTCACGGCTACGGCGATT
ATAGCGCAGCTGACGCTTGCTATCGAATTGATTATGTAAGTGATTGAGTCAATAGTGTCA
ATACATACAGCATCTTGGCTTACTGTCTCATTAAATCTTTGACCGATTACTTGGCATGCA
GTTAACCCTGACTGGCTTCCAGTTAATACTCGGTTTAGAAGGTCTGGTACCCACATATAG
AGTCCATTTAATACTGAAAAAATGCCAAACAATAGAAATCCATTTAAAAACAACCATTTC
AAATATGGTGGTTTTAGCAACGGCATTGTCTGCACTTGGAGGGATTTCAAGAAGCTTATC
TTTTCACGTTCGCCATCTGCAACCTGAAGTTGTTTAACAGGAAAATCTTCTGGTGATTTG
CTTTTGTTCTTTGCGTACATTGTTTGTAATATTTTAAGTGCTTCTTCATTTTGTCCCTGA
GAAACTAAGTATTTGGGACTTTCCGGGCCGAACGATAAAAGAAAAGCGGCCAAAATGAAG
AACAGTGAATAAACTATGACCAAGAGACGCCACGATCGAAAGTAGTATGCCCCGAAGTCT
ATTCTGAAGTCTAGGGGTAAGATCAACCAACCTAAAAGAGGAACTAAAGCTGATCCTGTT
ATTTGCAAAGCGTTTGTTATCGAAAGCATGATATCCCTATGCCTTCGCGGGAGAATCTCA
CCAATATACGAATAGGGAGCCGCAGCTGGACACGCTAAACATAGTGAAGTAATAAATTTG
CATACAGTAAAACTTATTAGTTCCGGCATAAAGCCTGATATTACACCAAAACCTCCTGCC
GCCAATGAACCATATATGATAACACGTTTCCGACCTTTCGTGTCTACTAAAAAACCCCAA
GGGAATGACGCTACAACAATACCAATATACGGTACAGAAGAAATAAAGCCTCTCTGGGCA
TCAGTCATGTTCAGATCGCATTTTGCTGAAGGAACAATGAAGGAATATCCAACCGGTTCT
ATGATTGCAGCGATAAGAAACAGCGCCAACACAAGGCAGTACTTGAAATTATACCAACCT
AAACCAACAACATCCAAAGCTTGATCCAAATCAACCGGATTTTTGTGACGATTTTCGACA
AATTCCGTTACTGTACCAATTTTATTTTCCATTATAAAGCTTCATAAGTATTGAGCACTA
TAAGTTCTTACACAAAACACTAGGTCTTGTAACAGTTTTTGCATGAACTTTTTAACACAT
TAGTGAATTTTTATAATATGTAAAAATATATTGTTTGTCGCCCGGACGAGCGTTGTTCAG
TCGACTGTCTTACTCGAGAGTCGCACGTTTAAAAAACATCGGCGCCGGGACTGAAA
(2336 bp)

- SilkBase 1999-2023 -