SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40204_c0_seq2
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:7.01 TPM:5.54
ORF EntryO_BomoMG16735_complete:A_BomoMG_comp40204_c0_seq2
Sequence
(Nucleotide)
GGCTCCGGTAACCACTTAACACCATACACACACTTAAGCAATAAAAAATATATTCTCGTT
TCGATTTCGGGAACGGTGTAGTTACACCCTGTATAATGGTATGGAGGTTGTGTCGTGTTG
TACCGTGGCACGTGTTAGTGCGTCAGTTCAGCGACGCCGCCGGCCGCACAGTGCAGCGCG
CCGCAGCCGACGGAACAGCGACGTCTCGCGCTATCAGATACGCTCCACGTAGTTGCCTGG
GAAGGTACCGAAGCGCCCAGTTCTCTGGCTCGAGCCGACGTACCAGCCATCGTCGCATTT
CTCCAGTACGTACACCGTATCACCTTCGTTCAGTTCGAGCTCGTCAGGATTTTGAGGCCG
GTATTTGTACATCGCACGATATGGTATGGCTTCGGCATTAGTGTCGACGTACAGGGGTTC
GGTGTTATTAAGATCTACCCCCGAGCCTGTTGGAGGACCGTAGCCACGTTCGGAAGGCGT
CAGTGTCGCTTGGGCTGGTTTCGCCACATAACCAGGAAGTGGCTGAGTGGAAGGTGGTGC
ATTGGAGAGCGCTGGATTGTTCTGCTGTGGCGTGTAGCTATGAGAACCCATACTTCTTTT
ATCGGAACCGTTGAGAAGACCGTGAGCGGCCGGTGACGCCGCTGGCTTATCGGTGTTTAA
GATTGGCCTCGGATCAGGTTTGCTCTGGCTAGGTTCCTGTAGAATTGTAACGTAGCTGTC
CGGGAATATTCCCGTTTTTAAGCCGTTGCGGCCTTCCCACCAGTTCTGGTCAATACGTCT
GGTCAAAGTCACAACTTCTCCTTTCTTCAATGGCAGTTCGAGGTTGGTCTGTGCTATGAA
ATCAAACTTCGCCCTGGCACGGCCTTCGACGATTGACGGCTTCTTAATAACTTGGATTGT
ATCACCCTTCTGTATCTCTACATAATTATACGGGAACAGACCAATTCTTCCATGAATTTC
ACCTTCGTACCAATTCGCGTCAATCTGCCTCCGCACAAATATTATATCTCCTTTTCTAAA
ACTGAGTTCTCGAGAAGTCTGACCGTTGAAAGTGTATAGGGCTTTTGCAAGAACTTTGTC
GGCATCGTCGTATCTGTTCAGAGGGACTACGGTCTTCTGTGAAGGCGTGAAGTTGTCTTG
GTGACGCCTGTTTTGCATATCTTGCAGCTCCTGCAGATATTTATTCCGTTTCTGCTCTCG
ATACAGCCTCTTCATGTGTTCTGCCTGCTGCCTCGCAAGCTCTCTCTCGGGTACGAGAGG
TAAGGGGTCGTGTCGCACTGGACACCGATAGTGGATGTTCACGTCGCTTTCCACATAACG
CCGGGGAGACTCTTGACGTGGCGGGGCAGGAGATCGGAATCCGCGTAGGGGTGGCTCCCC
GCCGGCCTGCAGGTCACGATACGCGGCCCTCCTCTCCGCTGGAGAGAGCGGAGCGTCCGT
TTCCTCGCGACGGCGGAATATAAGAGTAGAATCAGATTCATAGCCCGACTCCTTCAGAGC
TTTTGCCATGTTGGATTTTGACAGAATTGCGGCAGTAATATCCTTCTTCTCTTTTGGCGA
AGGTTGGGGCAACGAGGTAGTGCTGGATATATTTTGCTGCTTTGCTTCTTTATCAACGAC
TGAAGATTTCCCGGGCACATAGTTCTCAATCCTTCCCGGCTGGTTCTTGTAAACTTCTTG
GCTTGCCCTTGCCGATGCTAATGTACTGTATTTATTATTGGATAGATAAGAGGAACTGAC
GTCACTGATCCGGCGATCTTCCTGCACGGATGCCGTTCGTCTCCTCGGGCCCGTCGTGAC
GTCGCTGTCATAGGCATCACTAAACGCACTGAGCCTGCTCAATCCTCCTTCAGGTTCGCT
CAGGTAGCCAGAACGTGGGTCGAAATATGCGTATTGAGATTTACTGCTTGGCACCCTTTC
TGCTGCCTCTCGTCGACTTTTGTATCGTATTGTCACGTAATCGTCATCGTATTTGTTTTT
ATGAATCGTGTCGTACATCTTTTTATACCAACGCGATGGATCTTTGACTTCAGATCTAAG
TGTAATCGGCATGCCGTCTTTTGTTATAGGTCCAACACCGTCGACTTTCCGTTGAGTATC
AGACATTTTACGAACGCCGACACGTTCGTAATCTCTTCTTTCTGCTTCGCTCTCGCTCGC
GTACTCTCTTCTTAAGGCATGGACTGGGTCACCGCTTGGTGGCGAAGGTCTATCACGAGG
TAATCGGGCACTGTCTCTTTCTGATTGAAGTGTAGCAGGACCCCGTGGCAACTGTCCTTC
TCGCGCTTTTTGCAAGAGCGTGACAGTGGGGTTCTGCACTCGTGGTAGCCGGCTAGTAGA
CGATGAGCCGCTCAGCGTGTTCAGTCCGGTGGCGGGGGCACTCTGCGAGGTACGCAGTCG
ACCCTCGCTCTCGGAGCCACTGGTGCAACCGTTTTGTTCCGTGTTTGTGAATTTCCGGCG
ACTCGGTGGTGTTTCCTCAAAATGTACTGGTCTGAATGTCTTCCGTGTGGGTTGCGGAGA
TGGTTCCGCGCTACCCGGCGTCCAAACCGGCGGGGGCGGCGGAGGCGGCGGTCCGCCGGG
ACTGCGCGGGGTGCTCGGAGCCGGCGGGGGCGTTGGCGCTCCCGGCCTCCACACGGCGTT
ATATGTATATCAGGGTGACATTTCCCGTGGCGACGTTTTCGAAGCGGGGAGAGGCGTACG
ACGGATGAGCGCACGGAAAACTGTCGGAAAATGTGCGGGAAACTTCACTGAGCGCGGACG
TGCGACGTGTGAGAGGGCCGAG
(2782 bp)

- SilkBase 1999-2023 -