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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40204_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:7.85 TPM:6.20
ORF EntryO_BomoMG16733_complete:A_BomoMG_comp40204_c0_seq1
Sequence
(Nucleotide)
GGCTCCGGTAACCACTTAACACCATACACACACTTAAGCAATAAAAAATATATTCTCGTT
TCGATTTCGGGAACGGTGTAGTTACACCCTGTATAATGGTATGGAGGTTGTGTCGTGTTG
TACCGTGGCACGTGTTAGTGCGTCAGTTCAGCGACGCCGCCGGCCGCACAGTGCAGCGCG
CCGCAGCCGACGGAACAGCGACGTCTCGCGCTATCAGATACGCTCCACGTAGTTGCCTGG
GAAGGTACCGAAGCGCCCAGTTCTCTGGCTCGAGCCGACGTACCAGCCATCGTCGCATTT
CTCCAGTACGTACACCGTATCACCTTCGTTCAGTTCGAGCTCGTCAGGATTTTGAGGCCG
GTATTTGTACATCGCACGATATGGTATGGCTTCGGCATTAGTGTCGACGTACAGGGGTTC
GGTGTTATTAAGATCTACCCCCGAGCCTGTTGGAGGACCGTAGCCACGTTCGGAAGGCGT
CAGTGTCGCTTGGGCTGGTTTCGCCACATAACCAGGAAGTGGCTGAGTGGAAGGTGGTGC
ATTGGAGAGCGCTGGATTGTTCTGCTGTGGCGTGTAGCTATGAGAACCCATACTTCTTTT
ATCGGAACCGTTGAGAAGACCGTGAGCGGCCGGTGACGCCGCTGGCTTATCGGTGTTTAA
GATTGGCCTCGGATCAGGTTTGCTCTGGCTAGGTTCCTGTAGAATTGTAACGTAGCTGTC
CGGGAATATTCCCGTTTTTAAGCCGTTGCGGCCTTCCCACCAGTTCTGGTCAATACGTCT
GGTCAAAGTCACAACTTCTCCTTTCTTCAATGGCAGTTCGAGGTTGGTCTGTGCTATGAA
ATCAAACTTCGCCCTGGCACGGCCTTCGACGATTGACGGCTTCTTAATAACTTGGATTGT
ATCACCCTTCTGTATCTCTACATAATTATACGGGAACAGACCAATTCTTCCATGAATTTC
ACCTTCGTACCAATTCGCGTCAATCTGCCTCCGCACAAATATTATATCTCCTTTTCTAAA
ACTGAGTTCTCGAGAAGTCTGACCGTTGAAAGTGTATAGGGCTTTTGCAAGAACTTTGTC
GGCATCGTCGTATCTGTTCAGAGGGACTACGGTCTTCTGTGAAGGCGTGAAGTTGTCTTG
GTGACGCCTGTTTTGCATATCTTGCAGCTCCTGCAGATATTTATTCCGTTTCTGCTCTCG
ATACAGCCTCTTCATGTGTTCTGCCTGCTGCCTCGCAAGCTCTCTCTCGGGTACGAGAGG
TAAGGGGTCGTGTCGCACTGGACACCGATAGTGGATGTTCACGTCGCTTTCCACATAACG
CCGGGGAGACTTATATGGTAATGGAGCGTAGACGTCAGGATATGTAGTTGTTCTGTTTCC
CCATTCTGAAAATTCATGTAGCGTATGGCGATTATCCTGCTTCTTCAAGCTAAATGGCTT
GTGACGTTGAACCACCATTGTATTAGTTTCTTCTTCGTTTTTGAATTCCAAGTTATCATA
GGATTTTGATTTAAATAACATCTGTGCATCTTCTTGAGAGTTTTGTTTTTCTGTGTCATT
TTCTTCATATTCAAACGATTTATTTTTTTGCTTTTCCTTATTTAAATCATTAACGTAATT
ATAATCTAGATTCGTATAAATTCTGTCATTACCTTTATCAAAGGATAAACAGTCATCGTT
CTCTAGCGGTTTTATGCTCTTGTAATCTCCGCGAGCATCGTTATGTTTATTTTCTACGTT
TTCATCACCGTTTTGTGTTATTAATGTTATCGCTTTTGTTACAACATTAGACAGCATTCC
GCCATTGCATTCCCGAGGTGATACAACAAAGGAATTATTTGAAGATGCGTCGTTTTGACG
AATATCGCTATATTCGATACGTACTACAGTATTAGTTACCGTACGAGAATGTCGTTTGTC
TGTTTCTGGGTCATTTTCAGTTACTGTCGTTGAATTTGGTATGGAATTCTCTTCAGGATC
GTGATCAGAGGTACAATTTAAATCAGATGCTATTTGAAAATCTTGTAATCGTATACTTTT
GTAATCGTCAGTTTGCGTATTTATATTATATTCATGTTTTACAGGTTCGCTTAAAACTTT
AGAAGAAAAAACAGACGTTGATTTAATTTGGCCTCTAGTTTCCTGCGAAATTTTAGAATT
TTGTTCACCATTGCTTGAGCTGTCCACATCATATTTTACGATTGATTTGTTAGGACTGCT
TTCTTTTGAAAAATATGCGACGTCTTCTATTTCATTGCTACCATCTTCATTGAAAAGTAA
ATTATTTTTGACGTACACGTTTAAAGCTAAAAGGGATCTTGATAAAGATCCTGAACCGGG
AACATCACTAAAAAATCCGTCGTCTTCATAGGTAACGTCACTGTATGAACCAGTTCTACC
ACGGTTGTTATTTATTTCGTTCGCAGCACTCATTTTACTTCAACACAAAATCATGTCACT
GACACTTAACGCAGTATCTAAATGATATTTTACTAAAGGTATGATAAAGTAGATAACGCT
GTGATATCAACCAACAATGATTGATAAACTTTCAATATATTTTAAGAAATATTTTCAATA
TGATGATATTACGGACGTAAAATAAAATAATTTGATCAACCATTGCACTACTTATTCAGA
ACAAATCCTTCTGCACATGAACAAAAAGCTGGCCGAACTGTTTATATTCGGAAAAAATAC
TGGACCGACAAGTTTTAGCCACACAATCAAGGTGAATGACATAAATCGC
(2749 bp)

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