SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40192_c1_seq3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_protein_muscleblind_isoform_X4_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
Transcript
Level		FPKM:19.71 TPM:15.57
ORF EntryO_BomoMG16690_complete:A_BomoMG_comp40192_c1_seq3
Sequence
(Nucleotide)
CTCTGCTTGTGCTTGTGTGACTCGCGCCGCTCTGTACACCGCACTCGTGTCCCGATCACG
ACGCGTGCCGCCCCGCTGTGGCCGCGAACCGCGACCTTCTACGCTACCAACGATATACTT
CTCCTAACTTACGTGCATCTTAATATGATTTGACTTTGGACATTTTATAAGCTCCCTTTA
CCCGGCTTGTTTTACCCCTCATCATAGTTGAGCCCCGCACCGCACCGGCTTGCTCGCTGA
CCGCCGAGCCGCTAATCTAGCTTTTTTCGCGCCCCACCGTCGCCAGCCCAGACCCACACC
GGCCGCCGCAATGCTCGCGCACCAAGCACAGCTCGCCCTCTACTAAACTCATCAGTCAAT
ATCTATAAAAACGCGTGTGATAACAATAATTTAATACTCGCCTCTATAAGCTTGCAACGT
CGGTGTCTTTAATTCTAACTTAATTGTAAGGATTAATCAATTAGTTAGTAACTATCATCG
TATCCGCGCGTCTCCCGCTGCGGAAGTATATTTCTCGCGTGTGCAGTAGTGTGTGATAGT
GAGGGTGCGCGAGAGCCTCCAGTGGCCAAGAGTAGTTTGCGACAAACCAGTGTGAGAAGT
GCATGCAAAGAGCGCGCCGTCGCGCTCGCCCGCTGTCACTGCCTATGCGCCGCACTCGCA
CTGCGTAAAAGTGCGCGCGAAAACCGCCTCCTTTGAAGACATAGCCAACAATGGCCACCA
TGGTGAACATGAACAGCTTGCTGAACGGCAAGGACTCCCGCTGGTTACAACTCGAAGTAT
GCAGGGAGTTCCAGCGGAATAAGTGCTCGCGACCAGATACTGAATGCAAATTTGCGCATC
CCCCGGCTACCGTCGAGGTGCAGAATGGAAGAGTCACCGCCTGCTACGACAGTATCAAGG
GACGGTGTAACCGCGAGAAGCCACCCTGCAAATACTTCCATCCGCCACAACACCTGAAGG
ATCAGCTGTTGATCAACGGCAGGAATCATCTAGCCCTGAAGAACGCACTAATGCAGCAAA
TGGGTCTGACACCCGGGCAAGTGTTGCCCGGTCAGGTGCCCGCCGTGGTGGGCGGCATGA
GCGGCGCGGGCGCGGCCGCTGGTCATCTCACCACGCTGGATCCGATCAGTCTCGCCCTGC
TCGCCCCGCAGGCGACGTCACCTTATTTGTCGGGGGTGCCGGGCGTGGGATCGACGTACG
CACAGTACTATGCACCTCAGCTGGTGCCCGCAATGTTGGGTCACGATCCGGCAGCCGCCG
CCGCCTCGCCACTCGGTGTCATGCAGCAACCCGTGCTGCAACAGAAATTGCCTCGTACCG
ATCGTCTCGAGATGGACATGAAGAGCGTCGGTTCCTTCTATTATGATAACTTTGCCTTCC
CCGGCGTGGTGCCGTACAAGCGACCGGCTGCCGACAAAGCTGGTGTACCAGTGTATCAGC
CGGCGACAACCTACCAGCAACTGATGCAGCTCCAGCAGCCGTTCGTGCCCGTGTCATTTA
CTGGACACCCTCCCGGTGTGCCAAGATTTTAATCGGCAAGGATGTTCAAGACCTACCTGC
AGATTCGTTCATATTCGCGAAGGGTGCGGGCTGCAGGTGGTGGGGTGCCGCGTGGTGGTG
TGTCGCGATGCCGCCGCCGGCACGTGCCGCCGCGCCGCCTGCCGCTACTACCACATCCCC
GTTCAATTGCCACCGGCTCTGCGTCCCCCTTAACCCTCCACCCACGACCCTGCACCCTCA
TCCTTCGCCTTCCACCTCTTTAACCCCCCAACCCCCCTCACCTCAATCCTCGTCCTTTGA
CATCGTCGCCCGCGCCCTGCGTAATCCATATCGATCGCGCCTCTGGCACACTCAGGAAGG
GCAGGTTCGGCCGGATGTTGCTGTCGCTTCCGCGGCAGAGGTGGTGATATTTTAGTGAAA
ATCGGTTAGTGTAGAAAGGGGCAGCCGAGTCGCGGACGCTGCGGCGACCGCGGCTCGCTC
CCGCGCAGGATGAGCGTAAGTCTTCGGGAAAGAGTGTGTACATAAGTAGCGGGATATGAT
TCTCAGGCACGGTCATGCGATTGTGATATGAATAGATTTCGGGAAGCCGGAGCCGTATGG
AATTAATTTGTCGAAATCGTCGAGCAGTAGTTAGTGAGGTTTCAAATATTTTATGACTAA
TGTATAATTTTTTTTAAGAAACGATATGAGTTCCTGTAATAGCCGGGACCTGGTCGCCCG
GGTACTTTGTTGTGTATAAGTGACGCGTGTGGCCGGTGATGACAGGAGACGACCAGACGG
ACGGCTCTCGACTCCTCGGTCAGTGTCTGATGCCTAAATCACCCCAGTCCCTGTAAGAGC
ATTTTTTTTGTGAGATTTACTTTACATTTTTTTTACGTATGTTATATAATTACGTTTTTC
TAGAGGACAAGTTTACACTAGTTTAGAATTTAAGTGAATCAGTAACGGAACACCAATAGA
GTAGCCGCTTCTCTCCTCCGGCGCGGAGAGGTTCGACGCCGGAGCACAAGTCACAAGCGA
CGAGGTCGGCACGCGCGCAATTCTGTACAGTACCGAACGCCGTCGGCCTGTATTCCATAA
CTATTGTATATCCCACGATCTCGTGCCGTTACTGTACAGTGCGTCACGGCGTCGTCCGGT
CGTGACGGCTGTGACGCACGCCGCGCCCGCCGCCTCGCGTTCCGTTCGCACTTAGCGTCA
CACTCGTAGAGTGATATATAGTAAACATGAATTCGTAATACAATGAAAGAAGTTATCGGA
CAATATTGAAAAACGAATAAGGCAAACTTCCAAGCTATTTTAGTATGTAGAAAGTCGGCT
TTTATTCCGGATAGATTTTGCTAGAGAATCGTTTTGTTTCTAAAATAAATAAAAATAAAA
ATCAATAATCTGCATCTATAATATCGATATGCACAAATCGTTACCGACGATAATCGGGTC
CGGTGTCGACTCGTTGCGTATAATAAATAGCTGTGTTATTATTTTCGACATAAACAGTAT
TAAGGTTTTGATGAAATTTATCTGGTGGTACGTACGTTAGAGGTGGTATGCGGATAGAGA
GAGGCGGAGTGCGCGCACTGGCTCGGCTTCGGTCCTTAACAGCCCGTCGCCGAGTGCAAG
TGATGGGAAATCGTCGGTCGCGTCCGATTCGTACCGCGCACGCACTCCGAGGGCATGGAA
GCCTAATGCCTAATATTATTCCTAGTCCATATCCTTTTGTTGATCAGTCATGCGATTAAT
GTTAGAAATAAAATATTAATAATTTGATTTATTCCTCCCATTTAGTGGATATTTTGATAA
TGATATATTAATAATGAAATATTTAAGATACATAATACATATTTGATTCTAAATCCTGAT
AAAGTGACACTACGTTAGTAATTTAGTCGGAGGGATACTTGTGCCGTGATTATATTTTTA
GGTATATATTATGAAATAATTCCTAGCGTCGGAATTAAAGAAGTGACTAATGTGTAAGCG
TGTTATGTATATTTATTGTCGTAAACGTAAGTGGAATGCCATATCGATAAAAGGTGAATA
TCGGATGCGGAGTCAAACTCGTGAGTAGCGTTTGTTTATGTTGGTTGGTTGGTTGTTGTT
GTATCAGTCCCGTGCTAGTGGCTAAGGTGAACAGTTCGCTTTTATCAATACGGCACTATG
GCTCTATGTATAAGTTGGCATAAATATATTTTTTTTTAATATTTTTTTTTTGTTGAAATT
TATCGTTTCTTTGAATATTATTTGTTGCCTATAATTTTACAATCAAAATTTTATGATCTG
ACGCATTTATTGTAAGACAATCGATTACTTTTATAATTAATTAATTAGTGTGATAATAAT
AATTATGGTATGAAATTGCCGTTATGAAAAGATGAACATCGAAAGTATCCTTCCTTGTTT
AGAAGGGACTGTCTGGCCCAAGGTTTCTAGTGGATTTTATATTTTTCTTTTGTTGTATTT
TTAATGTTGCGTGTGTCTTACACATAATATATTTCATTTTTGTGATATTTTTAACTATAA
AGTACTGTTATTATAAATCCAAATGGAATAATGATGACCTAATTTAATATTCAAGAATTT
ATTTGTAAATCACAAAAAAAAATATGTAAAACTGTAAATATATTGACAAAAAAAATAATA
ATGAACTGCAACACAATAATAATTTACTATTATAATATAATATCTCTCATCAAATACATT
GTAAGTTGTTTGAGTACTTTAATGACGGTATTGTAACGTGTAGTGTATGTACCTACTGTC
TACTTAAATGTAAACCGGTCCAGTGAACAAATTATGAATAATAATATTGTGAAGGTTTTT
TTATTCACGAACAACCACAGATTGAGAAAAAAAAAAAAACATGACATTGTAATTATTATT
TATGAAATTACTATGTGATGTGATCTTCGGATCAATTTTGAGTACAGTATAGATAATAAA
CAACTGACTATGTAAAAAAAAAAAAAAAAAAAA
(4473 bp)

- SilkBase 1999-2023 -