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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40175_c1_seq9
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat_domain_phosphoinositide-interacting_protein_2_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006497 P protein lipidation
GO:0006914 P autophagy
GO:0008150 P biological_process
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0034045 C phagophore assembly site membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0043234 C protein-containing complex
GO:0044804 P autophagy of nucleus
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
Transcript
Level		FPKM:4.86 TPM:3.84
ORF EntryO_BomoMG16580_5prime_partial:A_BomoMG_comp40175_c1_seq9
Sequence
(Nucleotide)
CGCCGCGCGCCTGCCCGCCACCGGCCACCGCGCCGTCGCCGCCGTCACGAGAGTGTCGCG
CAGTCCGCGGCTGCTGGTGGCCACGTCGGCCGGGGTGCTGTACGTGTACGCGCTGGACGC
GGCGGAGGGCGGCGAGTGCGCGCTGCTGCGGCAGCACCGCTTCCTGGCGCCGGAGGAGGC
GCCGGGCTCCGCGGACCCGCAAGTGGCGACGGGCAACAGTTACGCGGGCGCGCTGCGCGG
CCGGGACCCCGCCGCCATGACAGGTACCGACCCCACTCCCCCGCCGCCATCCTCCGACCG
AGACATTCATGTTTGAACCACTCATTTCATTGTCTTACTATAATACATTCCACTAGTCCC
AATAATGACGCGCTACTCCTAGTATCATGCAGTAGTAGATCGTGTGTAAGTTACAATGAT
ACTCACACGAGTACAAGCGGAGGCAGGCGCCGGTGCCGAGCTCAGCTGACACAACAACTA
CTTTAAACAATATAATCGCGATATAATTAAAATATTTTTCATTCGGCCCGCAATGTAGTA
AGCAGTAGGCGCGGTACATTGCGGGCTCACTGCTACGAACGAACATTACTACAACGACAG
GCGTGTACAGTTCACACAGTCAATTCACTGAAAATTTATGTTTTCGTCATATCTTTTATT
CCGTTTCGCTTCGGGGATTGCTTGAACACACATATTAGCTTATAACAACAGTATTTTTAT
ATGCTAATATTCTTTTAACTATATTGTGAACAGGTAATACTGTGATATATTCCGTAGCCC
TTCATATTATTGTAATGATGTCGCTGTAATACAGAACCGCGGAGAGACCGTCCAAACCTT
ATGTCAGTCAGGTTGGAAGTAGTGCACAAGCTGAAACTGAAAACTTAAACGTAATATATA
CGCAGTAGAATTTCATGATCATTGAACTCCTCCTCCCTCCCCGGTCCTCATATCCCAGAC
ACAAACGATTCAATGTTTAGTTTGTAATGCTTTCTACTATTCGCCCGATTCACCGTGAAG
CGCTGCGTCGGCTGGCTGACTCGCGCTTGCCAATGTTGGACTAGTGTTTGCCGAATACGG
AACCTAACATTTATCTCTATATTCGACAAGCATTGGACCAATTATTCAATCGTGACGCTT
TACTGCGCTTTCTTTTGTTTGTAACACTTCTTTGGCGATGCTCGGCCGGTCCCGTCGACC
GCATGTCGGCGGGATTAGCTGATATATATATCATAATTTTAGTTTTAATCGTTCGACCTC
GCTTCATTTATATGCGGATACTTCGTTTGCCGTACTGCGGGTTGTGTTTGTGTGTCTGGT
GTGTATGGGCAAGCGAGGTAGCCGCGAGTCGACGAGCAGAGTGCAGGGTGCGGTACCGCT
CAGTAAGGCTGGCGTGTGGTCGGCAGGCGAGGGGGGCGCGGGGGGAGCGGGGAGCGCGGA
GGAGCGGCGCGAGTGACCGCCGCCCGCACTCCGCGCGCACCGCTATACGTACTCTACCGA
CTACCGACCATTCCGGCTCCGGCGGCTGTGTATCACGAGCGTGACGTCACCGTGTTGTCG
CGATTTATTCTAGTTTGCTCATTTTAATGGACATTTATGTGAATATTGTGATAATAATTT
GTAAAAACCGAATTTTATTTTTTAATATAGTTTTTAATTTTAATCATTACTTTTCTTTTT
ACTTTTACTTTACCCGCGCTTATCCCTCGATTGTGCTTCGGTATTGTTACTATAGAAATA
ATTTGTAGAAATTAGCTTAGTATTTATAGTCATTAGAAACATGATCATCGGTCATTAGCG
ATTTCCGAAAGCAAAAGTTAAATATGATTGAATGATCCTAGTCCCTCGCACCGGCTCCGC
TCTGCTCTCCGCGAACATCCCCGCGACCACCGAAACCTACACCATCGCTTAACTTAACTT
CTAAAATTGATTTTGTTTCGTTCGAACCTAATCTTAAAAGCCATTATTTAGTTTCAAACA
AATGACCCTTTTACCTGTTACTTGACTAGAAATATAATGGAAATGAATATTTGTATTCTT
TTACAGACAAGTAGTAAGCAAAAAAATAGATCCTAAAGTAATTATTTGACTGTAAATAAT
CTGACACACGTGACAGTGGTCATTATTTATTTGTAATATTTCTAGTGAAGTAATCAGAAG
TCCACACTAGAATTTCGAGTGTAGTGTGGACGCGCGCGCCGGGCACGCTTCCGACATCTT
GGTCATCATCATGTGTCTGAACGAATCACATTGGATCTGCTTAACACCAAGCGAATGTAT
CAACGTGGTTGTACCTTCCAAACGAACAGTAAAACCGATTATAGACCCCCGTCCTGCGAC
ACCCTCCGTTCGTGACGTCACTGGAGTGGAGTGTTCAATGGAAATTTGAAAATGGTTTCT
ATTGTTTACTAGTTGACCCGGCAGACTTCGTAGTGCC
(2437 bp)

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