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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40175_c1_seq5
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat_domain_phosphoinositide-interacting_protein_2_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006497 P protein lipidation
GO:0006914 P autophagy
GO:0008150 P biological_process
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0034045 C phagophore assembly site membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0043234 C protein-containing complex
GO:0044804 P autophagy of nucleus
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
Transcript
Level		FPKM:2.56 TPM:2.02
ORF EntryO_BomoMG16563_5prime_partial:A_BomoMG_comp40175_c1_seq5
Sequence
(Nucleotide)
CGCCGCGCGCCTGCCCGCCACCGGCCACCGCGCCGTCGCCGCCGTCACGAGAGTGTCGCG
CAGTCCGCGGCTGCTGGTGGCCACGTCGGCCGGGGTGCTGTACGTGTACGCGCTGGACGC
GGCGGAGGGCGGCGAGTGCGCGCTGCTGCGGCAGCACCGCTTCCTGGCGCCGGAGGAGGC
GCCGGGCTCCGCGGACCCGCAAGCTGCAGGTGTGTGTGCGTCAGATTCAGAGCGCGGCCG
GGAGCTGGGCGCCGCGCTCGAGCCCTCCCCGCCGCGGGGACCCTTCGACCTCCGCGACCC
CGACCACTTCCCCCCCATCGCCGTCAGGGCACCGCAGCACTAGGACCGCCGCGCCCGCCG
GACAGAACTTTCAATGTTTAGTTCAATTCTACAAAACATACACCTACATCAAACTTTATG
TAATTAATATAGATATCTAAAAGATTGTTTGTGTCAGAAATATTGACCAGAACTTGGACC
CGTGGGACGGGGCCCGACGTGGCCCGCCGCGAGCCGCTAGTGTAAGTTGTCGTCCGACTG
TCTTGTCCCTTAGATAAGTCGTTTTTACAATTTTATCACTATCTCGATTATATTATTGTA
GACAAATTTTACAAATTTCATATAAATTAAATTCAAATTGTATTTACTTTGATATTATAT
ACTAAAAGCATGTGACATTACTAAATTTAGGAATAAAAACAAAACAAAAAATAATAAATA
TTTCAATAATTCTATATTAAATCCGGACAGACAGATGAGACGACGTTAGTGTAATTATTG
TAATATATTTAGTTAAATTGACCCTGTCTCTTTGTTCTATGACTTTATAGTGCAGCTTAC
AATTATAAGATCTGAAATAATAAAATAAAAATGTAAAAGGAAATGCAAATAAATAATAAA
CAAGATAAAAGTTTATTTATGAAGAAGCGCGCGGGGCGTGCCGCGGGGCGCGGGGTGCGG
GGCGCACTCTTGCACGTGGCTGCGGCAGCTGGGCGGCCGCTAGAGGCTGCTAGTGACTGC
ACAGTGCACAGTGCACGCTGACCACAGATAATAATACACTTAATGTGACGAGCGGCGACG
AGAACCCGTCCGAAGCGCGCAGCGTTGGAATACAATTTAAAAAATAACAACAAAACTACA
AACCGTAGACGCGACTCGATGCTCACTAACGTGCATCTAGACATTTCTGTAATTTCAAAG
GCAAAAAACTTGTATAAACAAATTGTAAATTTTTATTATAATTTATTGTATATTAGTGGG
ACTTCGTAAAATAATTTAAAAAAAAACTATCAGAGGGACCGCCCTCGCGACCTCCGTGTC
AATATAAATATCGTGAAGTTCGGATTATAATAAA
(1354 bp)

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