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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40171_c0_seq3
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:6.30 TPM:4.98
ORF EntryO_BomoMG16521_complete:A_BomoMG_comp40171_c0_seq3
Sequence
(Nucleotide)
TTAATTTTTAACCGAAAACTTTTATTGCAATTTTTTACTTATACTGATAATTTGACTTTG
ATTACAAAATCAGTGTGCGTTGTGCGAATCTGTGATATGGTTTCGGTGATTACCATTAAT
TTTATAGTGTGATATATTAGTCATCTTCATACATGTTTTTTTGTGTTTAAATTACAACTA
CTTTGTAAATTCGAAATTCAAATCCGAGATAAAGAAGAACGATGACGTCACGCCGCCGTT
CCGACACGACGTGATCCGATTGGTGCTGGCGTCTTCACGCCTCGTCCTGATTCGCGGAAA
ATGTCCGGTCTACAGACGAGAAACGAGGATAACATCAATGGGGTCGACGTTCGGGAGCAG
GGAAGCGCTTTGAGGGTAGCAACAAACACTCCTCATCTGGTGAGCCTCGGTACTGGAAGA
CTGAGCACAGCTGTCACTCTACATCCCATTAAGCAAGGTCGCGTGACAATAGGTTCTGAT
CCGACATGCGACATTTACGTCATGGGGACAGGCGTGGCGAGCGTGCACTGTCGCGTGGAA
AACTCTCACGGCGTGGTCACATTGTATCCAATCAGTGGAAGCACGCTACTGGATGGTCTA
CCCGTGGAGAAGCCTACGAGACTATCTCAGGGCAGCATGCTGACCATAGGCCGCTCAAAC
TACCTCAGATTCAATCACCCGGCTGAGGCGAAACTGATGAAATCCGTCCTGCCTTCGGGA
CATATTTCGATGCCCCCGATCCAATACCAGCCCAACGAGGAATGTATCACCACAGGCTAT
TGCACCACAGAGCAACGCTACCAGAACGTATACAAAGACGTCTCGCTGACGCAATTGGAC
CAAGAACTAGATTTAACACTCAAAGAACTATCGAAGAGAAAGCCCCCTGCAGTTCCCAAG
AAGCTATTCAAGGACCAAGATGACTCGAACTCGGATCAAGAACGTTCCAAACCTTCGAAC
ATCAAGAGCAAAGTATCAAAGTTCGAATACTACGCCAAACAGCAGAAAGTCGGACGCAGC
CAGTTTTACACGTCAAACGAAAATGAGATCTCGCCAAAAGTGTTCAGCGCCAACTCGTTA
ACGGTCAACACGCCAGCCAAAGACGTCTTAGGCGACAAAATGTTGCCAAACTACATGAAG
AAAGACGAGGCGACAGATAAGACGTACACGAATGTTGCCATCAGAAATAAAATGAAACTA
CACGAAACTGTTAAAGGCTTTGAGGACGGTTACCAGCAGAGCGATGGTTACGGGAAGATC
AATGGTGAGATGGAGTTCAATGAGAGGTTCGGGAGCGTAGGGAAAGTTGTTTGTTTGTCG
TCGCCGGCGTTCGATAGGAACCCGCAGTATTCTCCGGTGTACACAAACAATCACTACGAC
AGGAGCTTCGAAGCTGAAAACCGGAGAATTAAGGCTTACCAGGAACGCGTCAAAGAAGAA
GAACAGAAGGAGGCTGAGACTGCTCGTCTCGAGGAGATACTGAATATGTGCGCGGAATAC
GAACGGCAAATTTCCTCCGGTGTTCCCATAACCCCGACCGAGAAGAGGCCGCACAACAAG
ATCATCACGAATGGCTCTCTGCCGCGGAGCGTCACCCTCAACAATCCCAACTTCGTGCAG
ACCAACGACGGATATTACAAGTTCGAAACTAGTCAAAGTCGAAACGCGTCCTCGAACAAA
CCGCAACAAATTCAAAGGAACTTATCTAGCTATGAGAATTACGATCCCGCGTCCCCCGCC
CCGCAACCCGAGCAACTGACGCCCGAGGTCACGATACCGCGGAACTACGGGAACATAGGT
CGCATGGACGAGATAGGCATTCCCGTCGATGACGAGAGCGTCTCTAGTCCGATAACAATA
AGGAGGAACCAAAACGGCGGCAAACCCCCCGCCGCCTCGCCCGTCGGGAGCCCATACGAG
AATATGTACTTACGAAACAATATGTACAACTTAAACCCCAAATCCCCGACGACGCAGAGT
CCCAGAACGAAAATAAAGACCAGTTTCGCGCATAAAAATTTGAATTCGCCTCAATATTTT
GTGTTCCCCGCTCCGCCGCCCGCCGACAGCCCTAACAAACCAGAACTGGACAGGCAGAGT
CCTATCAACAATGCTAATAACGTTGTCAACCATGAAACGGCGACAGTAGACAATGACTTC
GAACGGTTAACCAGTGCAGTCGGGATAGAAAAGCAGCTTAGTCTCGAAGAAGAGATACCT
ATGATCGACGATGCAGCTCAACCCAACGACATAGAATTTAGATATTCAAGGACTATAGAA
ACAAACGAAACGAAACTTGAAGATTTAGAGCAGACAGGAGAAGAAAAAACGACCCTGGTT
AAGAACAAGAGTTTCGATGACGTCAAAAAGGAGTTAATGGCCGATATACCGGAGCTGGAG
GAATTCGAAAAGGATTTGAAAAGAAACAAAAGGGACGATATAATAATTAAGAATATTAGT
GAAGATTTTAAGAAGATAGACGCAGATGCGGACTCTATTGATGGAACGGGTTTAGATGAT
AATGCAGATGAACTCAAAGCTAAATATGAGAGGTTGAAGGAGGAGAGAAAGAAGTTGGTC
ACAGAAATTCAAGATCTTAAGATGAAGATGGCGGAGATCAGGTCTCAAGAGGACGACGTA
CTGCGAGAGCTGGAAATGGAGAAGGCGTTAATAAAAGGGGAATACGATTCGGAGATCGCG
ATCTTGAACATCGAACAGAAGAAGAGGACCGAGTTAGTTGAGAAGGCGACAAGGATCGAA
GAGGACATTCGGCTGCTGAAGGAGAAGCAGGAGGCGAGGCAGACTGAGCTGAGAGACAGG
GTCGAGATCGCCACCATGAAGATCGAGAACATCGAGAAAGACTTGAAGCACAACGCGGCC
ACGGTGGAGGAACTTCAGAACGCCCAGGACATATTGGACAACGAAACGAAGATATTCGAG
GATCTGGAGTTTCAACATCTGGAGGAGGAGTCTGAACTGCTGTCGAATAAAGAAGACATT
CAGAACGAAATAAACGTTCTGACGAAGAAAATTGACGCTCAGAAAACGCGCATCTTGACT
TTAAAATCCGAAGCCAATAGCAACATGACGTCGGCCTTGGACGAGACCAAGGTTCTCCAC
TCGGAGTACGTCAAGCTCCTCACCCAAGTTGAGGAGCTTACGGCCAGGCTGCAGGTCGTA
GAGGGGGAGATGAGGACGCTGCGGGGCGCGGGGGGCAGGCGGTCCCCTCACAGCGCCCCC
CTCACGGACGCCGCCCGGTCCTCCCCGCGCAACTCCGACAGCGAAAGTCCGTCTAAGTCT
TCCACTTCTTCGAAAGAGAAGAAAGGATTTTGGGAAAGGAACTTCGATTCGCTGAAGCGG
AAAAAGAAAATCCGCCCTCCAGACGTCCGGGCCGACGTCATGACGCAGAGCCTCAACGAG
AATCTGCTGCATAACATCCAGAACTCAGACTCCGATTTCGACCGGTTCAACAGTTTAAGG
CACTCGAAGACCAAAAAGGAGCCTGGTCCAGTCAAAAGCAGCTCCTCATCAAAAATACCG
ACGTTTGCCGCGCTCGGGAAGATCATGAAGAGGGACTCGTTTGGTAGACGCCGCGGGACG
GATGAAGTCGAGGCCAAGAACCGTTACGTGAAGAACGCGAAACCGGTCACGAATGACAAC
AAGTACGTCAAGGCCAAGTCATTGTCGCCGGACAAGGCGCATCCCCCGGGGGGGGTTGGG
GGGCTGCACAGGAGGAGCTGCGGCGACGAGCCCGGCGTGGTGGACGGCGGCCGGGTGCCC
TCGCAGGACGACATCGACAGGATCTCGCGGGTGACGACGGACGCGCCCATACTGCCTACC
GACGCCGATATGAACACGCTAGGCAAGAGGACCCTGGACAGCCTCATGGAGGTGGAGAGA
AAGCGACTGGAGATGCTCGAGGAGCAAGGATGCCAAGTGATAGAAAACGAGAGAGAGAAG
ATATCGGAGCTAAAGAGAAGAGCACAAGACGAAACGAAGAAATTGTGGGACCAGAAGTAC
AGGGAGAGGTCCTTCGAAGGAGACCTCGGGGAGGGGGGATCGCCCGGAGAGGGGGGCGGG
AGGGCGCCAGAGGACTCCAGCGTCATGGATGACAGCTTCATCGGAAACTGTTCCGTCTTC
GACGAGAGTTCGGGCTTGTTCTCATCGTCGATTGAAGAGTTGCAAGTCAGAAATTCTCGC
ACCGAATCAACTGAGGAAGACAAACGCAGCGATGACAGTCGTCCGCTCAGCCACGCGTCT
GACTTCAGCAGGGACAATATTTTGTCGCTTAGCAACGCGCCACGCCGCAGCCGACGCGGC
ATCGCACCCTACAGCGAGTCGCAGAGGCCCCTCACGCGGTACCTGCCCGTCGACAGGGAA
GACTTCGATCTGCGGAGACACGTCGAGTCTGCTGGCCACCAAGTCGAACTCTGCCCCTAC
GTGAGCGTGACTTCGAGTTCGTGCCGCGGGTATTTACATAAACTGGGCGCCAAGTTTCAC
ACGTGGTCCAAAAGATGGTTCGTTTTCGACAGAGAAACGAAAACCTTCGTATACTACTGG
GACAAGAGTGAGAAGAAACCCAGGGGCGGTGCTTATTTCCAAGTGATAGAAGAAGTGTAT
TTAGATCACGGCAACACGTCGAAATCGCCGAACCCACAGACGACGTTCATAGTCAAAACT
AGACAAAGACGCTACTACTTAATGGCTCCGTCCGGGGAAGCAGCCCGGATATGGATCGAT
GTGCTATTCACCGGCGCCCAGGGATACACCGAATACCTCGAGTGACAGCGACCATCGATT
GACAGATGTCAAATCTGACGTCTGTCAAACGTGCTGTACGATCATTTCGGTACTTTTTGG
TCGCCGATTATTATTATTTTAGGGACCGTTCTGAAAGCGAAAGAACAATAGAATTGAATT
AAAATAAAGTTTTGTCAATTTCGAAAACGACTTAAATTTTTACAATACGTCAATTAATGC
ATTTGTGTTTGAATATGTAGCAACACTACGGTGTTGCATTATATCGATACAAATTTTCCA
ATTGTGTAGTGGGTGTTTAAGAAAAAGCGCCTTATGTTTGTTTGATTCCTGAACGAATAT
AGTCTTAATGTAATTATAATGTGTTAATGCATTCTCGTGAGTACACATTAAGTGCGTAAG
TGGGTAAAATGTATAGGTTTCTAAACAAACAGACAAACGAATCAGTATTTTTTTTAAATA
AGTACGTTTTATATAAAACACATATAAATTTATATGTATTTATATATATTTACACACAAA
ACAATCGTGCCAATTATATTGTACAAATAACGTGGGAACGTATATTTTTATATGTGAATC
TTAAAGTCGCATTATATCTGGATTCTTATACGACATAAATAAATAAATAAAAACAAGATG
TCGATGCGAAATACAAATTTCATATAACTCTTAAACCGCTTACAAAGTTTAATTCAAAAC
ATTTAGTACAATATTTTATTAAGACATGTGTCGATCAAACATCTAGTCGGTAAAGTTCGC
CGACTTTTCATATATATTATATACATTACATTATGTATAACTATTTTTTATATAACACGT
ATTTTAGTAAATAATCGGATTCATAGGTGCCTTCTAATAAGACTGAACAAAAATTAACGA
AGACAACATGTTTGTCAAATGTAGTCGTAGTTGTGATAAAATAAAAAAACCCTTTGCCGG
TACAAAATAAAAGTGTTTCAAAATAATAAATACAGATATATGTAGTAATCTATGTATTTA
TACAACAATGATATATTTTTTAAATAAATATTTTTAAAACAAATAAACAAAAAAATTAAC
TATATTGATTTATATTTATAAATCTATAAAGGA
(5853 bp)

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