SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40170_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:4.84 TPM:3.83
ORF EntryO_BomoMG16510_complete:A_BomoMG_comp40170_c0_seq1
Sequence
(Nucleotide)
GTGCGACGCCGTGTCAGGTTAAATATTAGAAGTTTTAACAAAAAAATTAAATTTCTCTAG
CTATTGATAGAATCCTTAAAGCACCGTTATCGATATGGCATCGTTAAGCTTATTAACGTC
TCATTTGTCTAAAATTAAATTGCCAGGACCGCATCAGCTTGTGTACAAAGACGAATGTGT
ATATTCTTTTGACAACCCGGAATCCGAGACGGGTCTCTATGTGTCCCTGGTGTCATTCTT
GGGATTCGGGCGCAATTACGTTGAACAGTATTTCCAGAAAACCGGAAACGCCGTCTTCTT
ACATATCAGAAGAGAGAAACAACCAATCCCTGAACCAGAGCAAACAGGCGATGGTCCCGA
GAAGAAGATCACCAGGCTCGCCATAGGAGTTGAGGGAGGCTTTGATCCTGAATGTGGAAA
ACCTAAATTTACATACACTGATCATTACAGTGTGGTGGTGCTACCAGGATTTCACACATT
CCCATGGCCTGATCCTAATTTACCAGAACCTGTAAAGAAATCAGTTCAAGCTGTTATCGA
TGCAGAATCACCATTCAAAATCGCAGAATTGGCAGCATTACAAGGCACCTGGGATGGTGA
AAAACGTGAAGTTTCTGTACACTCTGTTAACCTCAAGCAGCTGGACAATGGTATCCGTAT
ACCTCCATCTGGATGGAAATGTGAGAAGTGTGACCTGACTAATAACCTCTGGTTGAACCT
GACTGATGGGTCCATACTTTGCGGACGTCGCTTCTTCGATGGCACCGGAGGGAATGATCA
TGCTGTAGAACACTACAGAGAGACAGGCTATCCACTCGCTGTCAAGCTGGGAACCATTAC
CGCTGAAGGAAAAGGAGATGTTTTTTCGTACGCTGAAGATGATATGGTGGAAGACCCATT
TCTCGCTGATCACCTCAAACACTTTGGGATTAATGTACAGCAGCTGCAGAAGACAGATAA
ATCTATGGTGGAATTAGAGCTCGAGCTGAACCAGCGTTCGGGAGAATGGAATACCTTGCA
AGAATCTGGAAGTGATCTAAGACCACTGCACGGGCCCGCTCTCACTGGACTCAACAACTT
GGGAAACTCTTGTTACATCAACAGCGTCGTACAGGTGATGTTCCGAATGCCCGACTTCGT
GCGTCGCTACGTGGAGGGGGCTCCGGAGATATTCGCCACCTTCCCCGAAGATCCGGTCAA
CGATTTTAATGTTCAAACCGCAAAGCTGGGCGTGGGTCTGCTGTCGGGCCGGTACTCGAC
CCCGGACCCCGAGGGGGGCCAGCTGGGGGTGAGCCCGCACATGTACCGGCAGCTCGTCGG
GAAGCACCACCCGGAGTTCGCCACCAAGCGGCAGCAGGACGCGCACGAGTTCTACTTGCA
TCTCTTGACGCTCCTACAGCGAAACAGCCGCCACAAGCCGAACCCTGCGGACTGCTTGAA
GTTCGCAGTGGAGGAGCGCATCAAGTGCTCGGAGTCGAACTGCGTGAGGTACACCACGAG
AGCCGAACATCATCTGCCGCTGCCCGTGCCCCTCTCCGCTGCTACCAACGTGGAGCAGGT
CCAGCAGTACGAGGCCAGACGGGCCCAGGCCGAAGCCAGTGGTCAGAGATTAGACCCGGC
CCTGGTGGTGAGGCCACACATTCCGTTTAAAGCTTGCTTGGAGAGTTTCATGAGGGAGGA
GACAATTGAGCAGTTCTTCAGTAGTGCCTTAAACAAGAAAGTCACCGCACATAAAATAAC
TCGACTAGCGACGTTTCCTGACTACCTCCTGATACAACTTAAAAAGTTTACTATCAAAGA
AGATTGGACCCCTGCAAAACTTGACGTGGCTGTCGACATGCCTTGGGAGGTGGATCTAAG
CAGCCTCCGTGGACGAGGGTTGCAGCCTGACGAGAAGCAGCTGCCCGAGGCATCCCCTGA
CACCCCAGCTCCTACATACGATGAAGTATTACTGTCACAACTGCTCGACATGGGGTTCCC
GGTGGAAGCGTGCAAGAAATCTTTGTACTACACCAACAACTCTGGTATCGAAGCCGCATC
CAACTGGCTCATGGAACACATGACCGATTGGGACTTTGAACATAAGTTTGAACCGCCTGG
GACTAAGCCTTCGGATGCGGCCGTGGGTGCCAACGTTGATGAAGCAAGCGTGGAGCAGAT
AATGAGTATGGGATTCACTCGGGCTCAGGTAGTCCGCGCGCTTGGGGCCACGGGCGGTGA
CGTCACACGAGCGCTTGACTGGATCTTCAGTCGCGCTGATCAACTCGACCTGGATGAACC
CACCCCGGGACCTGACAGGACACTTGGATGTAGGGACGGACCAGAAAAATACAAACTGAT
AGCATTTATATCCCATATGGGCACTTCTACAATGGTTGGTCATTATGTGTGTCACATACT
CCATGAAGGAAGATGGGTCATATTCAACGACAATAAGGTATGTCAATAGAAAATTTAAAA
G
(2461 bp)

- SilkBase 1999-2023 -