SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40150_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101743046_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:5.77 TPM:4.56
ORF EntryO_BomoMG16408_complete:A_BomoMG_comp40150_c0_seq1
Sequence
(Nucleotide)
GCAAAATTGGTTGTGCGTTCAAAATCTATGCTGATAATGAGTTATGTGGCTTAGAAAAAC
GTAAAATAGCTTCACACATTCATGTTTTAAATGTACTGCTTGCTACTGGTATCTCTTACC
TTTTGAAATAGGTTTTTATATCTGTATACGCGTTAATTGAAATGGTGTTGTTGACGTATT
TCGTAAGTTAGATTTCATTTGCGGTGTTATTTGAGTATGTGCGGTTAATACGGAATTATC
AACTTAATTCAGATATCGTGTGATAAGTGTTTTTACAATTAAAAAAGTTGTCATTATTGA
TACGAGTCCCAAGTGAACAACGTGAATTTTGTGTGTGAAATAATTCGTTCGTGTATTGTG
TTGTTGTGTTTTTTACTCTGTGAGAGCCATGCTGATTATCGGTTTGCACCATAACACTCA
GGTCCACTCGCGCCTGAGAGCGACCGAGGACGGCACCTACGTTTCATAATGGAAAGATGT
AGATTGTGGCAGCTCAGTATCCGCTGCTCAACATGTTGCGACCCGAGTCCCCGCTCGCAG
ACCACCGCAGCCTCTTGCCTCGCAGGCTGCTCCCGGTCAAAGCTCAAATAGCTCCAACGG
ACAAAAAGAAAAACCGTAGATCTCTGGAACTGAACCCGGCCAGCGATCACGCACCATACG
ACTACCCCAAACTATTAATTTCGAAAACGACAGACTCGCTAAACACAGAATGCCCTCGTA
AAGTGATCAACAAACAAGACTCGAGCGATAGCCTTAAACGTGCCCTATTATCGAAGGACG
ATAAGAAGGCGACAATCAAAGACGCGGATAAGAAAGGCCAGTTCACATCGCAGGACTCCA
CCGAGAGCTTGAAGAAAACGTTGCTCTGCCGACAAGACTCTAATGATAGCACAAAAAAGA
AGGAGCCTGAAAAGAAAGTGAAGGATGAAGTGAAAAGGATATGTGAAACAAAACGGGGAA
GCGATAAAAAAAGCTTCCTAGAAACGGATGCAGACGAGCCTTGTAAACGTATTTACGAGA
GAAGGACGGGAGCAGCAAGACCGACATTACCTCCAGTGGACGAGAAAGGATTCGGTACTC
CTAGCACTCCGAATGGAAGTCCTAATACGCCCAGCGTTGCGGCTGTGGCTGAAGGCTTGG
CCAGATGGGGCAGTGGGCTGCTGTCCCCTCGAGACGAACCAAGATTAAAGGCAGCCAGGA
GCTGGTACGGCTATGGCACCCTGCCAACAGACAACAGCGAGAAGATGGGAGCAGGCGCGA
ACGGGCCTGGTGGCCGTCGAGCCCTCGAGCTCATCCTCAGCGGGGGGCTGAAGTCTCTAG
GGCGTCCAGCAAAGCCCGTGCGCAGGGCTGCGTCCCGTGACTCCGTGCTGTCACAACCGC
AGCCCCTGCTTGAAGGCTTGAGGAAATGTTCGACAGTCCTCGCACTGACGGACCGGGAGA
AGGTTCCCGAACCGATTAGGGCTCACAACCGACTCCGCGCGCCCTCCGTCTGCTCTCGCT
GCTCCTCTCTGCTGTCGCTCGCCGGCGCTGGTGGTTCCAGGTATTCCCTGGACGGTGCCG
GCGGTGGCTTCGTTGCAGCCGCTCCGATCAACTGCAAGCTGTGCCTTGAAGACGCGACCG
CTGACAAGGTCACTATTATAGGCGGCTGTGGTTGCACATTCTGCACTAAGTGTATGAAAG
CATACGTCGAATTCGAAGTCTGCAACGGCGCGTATGAGGTTTCATGCCCTGACGCGAGGT
GCAGGCTGGGCGCCGCCCTCGCCTTGGACGAGATCTCCGCTCTCGTTGAACCCGCTGTTA
TGGAGAAGCATCTCAAATTCAGGCTCAATCATGAAGTGGCGATGGACTCCGGTCGAGCGT
TCTGTCCCCGCGTCGGATGCGACACGGTGGTGTCCGTCCGGGCCGCCAGTCCCGCACATT
GTCCGACGTGCCGGCACGATTTCTGCTCCCAGTGCAACCAGGAGTGGCACGGCGGGATGA
CTTGCGAGGCGGCGGCGGCCTCGTCTTCGATGGGCGGCGCCGGGGCCCCATTGCTACCGG
ACTCCGAGCTGATCAAGCTCTGCCCGATGTGCAGGGTGCCAATAGAGAAGGACGAGGGAT
GCGCCCAGATGATGTGTAAACGATGCAAGCACGTATTCTGCTGGTACTGCCTCGCTTCCC
TCGATGACGATTTCCTTCTACGACACTACGACAAGGGACCGTGCAAAAACAAACTTGGAC
ACTCGCGAGCTTCTGTACTGTGGCACCGTGCTCAAGTTGTCGGTATATTTGCTGGCTTCG
GTTTGCTGCTGTTGGTCGCCAGTCCGCTGTTGCTGCTCGCGGCCCCCTGTATCGTGTGCT
GCAAGTGCAGGCTGTGCAATCCAAGCACGAAGAATCTTGAAGAGGTAGACGAGGTCGATA
GCATCAGTCCCGGGAGGGACGACGATGACGAGATCACCCACGAGAGGTCCCGGGATCGAT
ATCTGAGCGACTGACACCCGCCAAGGTA
(2488 bp)

- SilkBase 1999-2023 -