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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40141_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_RNA_pseudouridylate_synthase_domain-containing_protein_2-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:0.38 TPM:0.30
ORF EntryO_BomoMG16382_5prime_partial:A_BomoMG_comp40141_c0_seq2
Sequence
(Nucleotide)
TTCAGAGACAATATGTAAGTAAGTAAGTAAGGTAATATGTTCGAAATGAGAATTCAGAAT
TTAGAATTGTTTTTTTTTCTCAATAATAATTTATTTTAAAATCGCACTTTTAAATTATGT
TCCGCATATTATCATGGACACCCTAATTTTTCCCAGATTTAGCGTCCTATACAAATTAGT
AATTTCGCATTGTTTTTATTTGATTTTTGGTAATAAAATACACGTGTATTAATCACAGCA
CAAACTAAAGCGGTTATTATATATATATATATCGAATTTACTTTGACTCTGAATAGCTAA
TCGTGAGAAATCTCAAAACCTTTTAACTTTAATTTGACGTGTGATACCAATAATAACCCT
GCCTCAGTAGAATGATCGATATATTTTTAATAGTATTGACCATTAAAAAAAAACACGCTA
AATTTTACCCCTCCGTATAATAATTATGTTTCGAAACGAGCTGAGAATTATTCTAAGCCA
ATAGGAACTGAAATCCAATCCAAATATTAGTTTAAGAAGTTTTCGGCTGCAACCAAAGTC
GAAAATTCCAGATCTGTAGAGCTTCATCTCTGTCGCGCACGAGAGATTTTCCGTTGTGCG
ACAGAGACGACGTTACAAAATCGAAATTGTAAGATTAGATTTCTCTAATACCCGATCTCC
AACAAGTTGCGAGTCGTAACATATGTTATACATAAAAAAAACAATTTTAACACAAAAATG
TTTTTCAAACAAAGGCATCAGTGAAAATGTGTTTTTTTCTTACACTAAAAACCTCACTTT
TCAATATAACTCAGCGGAATACTGAAATGACACCTGTGAGTTTAGATTATCGACCTTTTT
TTTTTATTTAAACTTCAACACGATCAGATACAATGTTTTTAACAAACAAACAAAAAATCT
TAATTGTTAATAATAATTCACCATCAATATCTATATATAAGCTACTACATACGGAAGTCC
TATAATTATAATGTTTACAATTTGGTCTTGAAGTTCATTTGAATGGTCTAGAGATGTGGA
GGGGGCGGCGTCGCGGCGCGGGACTATGAGTTCTCTGGCTCGTCCCAGTCTAGGCTCGCC
CACTGCGGCAGCTCCGTCTCGTATTCCCAGCCCGGGCCCTTGTACTTCCAGGCGTGTAGG
TACATGACGAGGTCGCGCGGGCGCGGGTCGCGGTACCGCACGCGGCACTCGTAGCAGTGC
GGGTCGATGACCTCAGCCGCGCCCGCCGCGCTCGTTGCGGTCTCCGCGCAGCCCGTCTGC
GTCGCCACCGTCACCTTGTCTGACTTGGCATCGTTAGAGTCTTCATTGATAGGGAGCGTC
GCGAGGGGGGTGGGAGAGGGTGGCGCGCGAGGTGACTCCTCCGCCGGGGCCTCAGCGCCG
CTCGACGGACTCGCTAGAGTTGCTTTATCATCAGGCGCCGGCTTTGAGAACAGCAAATCG
TCATCAGCAGCATCAACACCGAGCCAGTTCTCGGCGTTGTGGATGGCGATCAGATCCCGG
ACTAGTTGCTCGTCAGTTTTGCCGCCGGTGTCGCC
(1535 bp)

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