SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40134_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_probable_queuine_tRNA-ribosyltransferase_isoform_X2_[Bombyx_mori]
Ontology
GO:0005737 C cytoplasm
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008479 F queuine tRNA-ribosyltransferase activity
GO:0008616 P queuosine biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:7.43 TPM:5.87
ORF EntryO_BomoMG16341_complete:A_BomoMG_comp40134_c0_seq1
Sequence
(Nucleotide)
GGTCTTAGTTACCAGGTCATAAAAACTCTTAAAAAAAAAAGCTTACAAAATATTAAATTA
TTGAATCCGAATCAAAAAATATAATTACTCTCTACATTCCGAATTCATCAATATGAAAAC
AACATCAGCAGCTCTACGTTTTAATATATCTACTGAATGTAAAATTACAAAAGCACGCTC
TGCAGTTATGAAACTTCCCCATTATGATGTGAAGACACCAGTGTTTATGCCAGTAGGAAC
CCAGGGTACCATGAAAGGTCTTCTACCAGAACAGCTAGAAAATTTAGATTGTGAAATTAT
ACTAGGAAATACATACCACCTAGGAAATCGACCAGGTACAGATGTTTTAGAAAAAGCTGG
TGGCCTCCACAAATTTATGGGTTGGAACAGAGCACTCCTTACAGATTCAGGTGGCTTTCA
AATGGTGTCATTACTACAATTAGCGGAAATAACTGAAGAAGGAGTTAAGTTTAAATCACC
TTATGATGGCTCTGAAACTATGTTGACACCTGAAAGATCAATTGAAATCCAGAACAGCAT
AGGAGCTGACATTATCATGCAACTAGATGATGTTGTACAAACAACAAACCAAAACTATGA
GAGAAACAAAGAAGCTTCAGAAAGGACCAGCAGATGGCTTGACAGATGTCTAAAGGCACA
CAAGAGACCCACAGAGCAAAGCATATTTCCTATTGTACAAGGTTTATTAAACAATACCTT
AAGAGAACAGAGTGCTAAAGAACACATGACTAAAGATGTAAATGGATTTGCTATTGGAGG
GTTAAGTGGGGGTGAAGCAAAGGATGATTTCTGGCCAATGGTTAGCTTGAGCACAGGAAT
ACTTGATAAAAACAAGCCACGATATCTCATGGGTGTTGGAGTTGCCATTGATCTTGTAGT
GTGTGTGGCTCTTGGTGTTGACATGTTTGACTGTGTTTTCCCAACTCGTACAGCAAGGTT
TGGGTGTGCACTTGTGAATAAAGGACAATTGAGTTTGAAACAAAAAAAATATGAAACAGA
TCTAAATCCAATTGACAAAGATTGTACTTGTTCAACATGTTTGAATTACACAAGGGCTTA
TCTCCACAGTATTGTAACAGTAGAAACAGTGTCTTGCCATCTACTTTCTGTGCACAATAT
TGCTTATCAGATGCGTCTTATGAGGACTATGAGAGAAAATATTGAAAATGGTACATTTCC
AGCTTTTGTACAACAATTTGTAAACGAAGTTTATCCCAATGGCCAATATCCTACTTGGGT
TGTAAATTCACTTAGCTCAGTTGGAATAAATTTATGCCATCTTTAAAATATACTTTTATT
TTTCACTTTTAAATATTTTCTATAAAATTATTAGAAGAAAAAAATGTTTTAGTGTTAATT
TAATAGAAACAGGATTTGTAATATGATGGTCACATAAAATCATCGGAATCATTACCATCA
TAGTTAGTGGACATATTTTCCGCTTTCATTAATGTAGAGTAGCTTCTGAGTTCTGCCTCT
TCCTTTTTTCGTTTTTCTTCTTCTTTCTCTTTCTCCTTTTTTTCTCTTAAAACTTTCTTT
TTATCTTCTCTCTCTAATCTATCTCGA
(1587 bp)

- SilkBase 1999-2023 -