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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40107_c0_seq4
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X1_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
Transcript
Level		FPKM:0.77 TPM:0.61
ORF EntryO_BomoMG16168_5prime_partial:A_BomoMG_comp40107_c0_seq4
Sequence
(Nucleotide)
TGCGTTCTCAACATGGCCGCGCTTGCACGACTGTTAGAACAAATGTTCTATAGTGACAAG
ACAATGCCATTAGCTGAATGGGAATACATGCCTTGCGTGGGCCCACGGCCGCCTGCTGGA
CTTGTGGGGTTAAAAAATGCTGGAGCGACGTGTTACATGAATTCTGTGCTGCAGCAGCTA
TACTGTGTCCGAGCTGTCAGAGATACCATACTCACTGTGCAAGGAGCAGCAACAGATCCC
AACGAAGATTTTTCTGGAGAAAGTCACCATCACAGTATTTTAGAAAATAATATAGAGAAT
AATACTGACTATAACATCACAATATTGAAACAAGTACAGGCGATATTTGCACATTTACAT
TGCAGCAAACTGCAATACTATGTTCCAAGAGGATTATGGGCCCATTTTAGGTTACAGGGC
GAACCGGTAAACTTGCGTGAACAGCAGGATGCAGTTGAATTTTTCATGTCGTTGGTCGAG
TCGTTAGATGAAGCTCTGAAGTCTTTGGGACAGGATCAATTGATGGCAAAAACGATGGGA
GGAACTTACTCTGATCAAAAGATCTGCAAAGGCTGTCCGCATAGATACTGTAAGGAAGAG
CCGTTCAGTGTTGTGTCTTTAGATATTAGAAATATGTCACGTCTCCAAGAATCATTAGAA
GCTTATGTCCGTGGTGAACTGTTAGAAGGTGCTGATGCTTATCACTGTGATAAATGCAAT
AAAAAGGTGGTGACAGTGAAAAGGTTATGTCTGAACAAACTGCCCCCAGTATTAGTTATA
CAATTGAAAAGATTTGAATATGATTTCGAAAAAGTGTGTGCAATAAAATTCAATGACTAT
TTTGAATTCCCGAGAGACTTGGACGTCGAACCTTATACAGCGTGGGGCCTAGCACGAGCG
GAAGGTGACTCGACTCTATGGGAGGGGGGCGAGGAGCGGACGCCTGAAACAAATTATCAA
CTCAGCGGGATCGTTGTACACTCCGGCCAGGCTTCCGGTGGGCACTATTATTCATACGTG
CTCTTAAGGGATAACGGAAGCGAAACTGGCCGTTGGGTAAAATTAGACGATGGCGATGTA
TCGGAGTGTGCAATGCACGATGATGAAGAAATGAAGGCGCAATGCTTTGGTGGTGAATAT
ATGGGAGAGGTTTACGATCCAATGTTGAAAAGGATTTCATATAAACGACAAAAACGATGG
TGGAATGCCTACATGCTATTTTATACCAGGAAGGATACTATAGAAACAGTCGGTCTCGAG
CAATCAATGCGTAATCTAACACTCAATTGTGATATTAATTATAGGGAAAGTGCCATACCT
CAGCCGATTTGGATGTCAGTACGTCGAAGCAATATTGCATTCTCCCATAATCAAGATCAA
TTTAGTCTCGAACATTTCAATTTTATGAAAAAATTGTGTTGTATGAGATTACAACTGACA
CATGGTTGTGTACAACAAAGTACTGTTTGGGGGCCTGAACAAGAGGAAATGTCAATGCTA
GCGGTACAATTGGCAACTCGGTTTTTATTCCAAGTGGGATTTCGAACAAAGAAAACATTG
CGAGGACCTGCGGCTGACTGGCACGAAATTCTATGTCAACATCTGAGGTGTTCATCGGCG
ATTAGAGCGTGGTTCGGGACTGAAATATTTAGATATCCACATAGAATATGTGATTATTTG
TTATCATGCCCTACAGCGGAAATCAGAATAGTTTTTATGAAGATTATAGTTTTCCTAGCA
CATTTTTCAATTGAAGATCCACCAGTGAGTAACGGCTACGGCTCGTGGTGCACGCGCGAG
GAGGCGCTCTCTCTGTCGGACCAGCTCGTGTGCAGCGTGCGGGCGCTCACCGCCCCGCAC
CCCGATGCACACGGCTCGCGACACTTGCCGCTGCTTTATAACCTCTTCCTCACCTACGCC
AACCTGGGACTCACGGAGAAACTACAACTACTCCGGTTAAAAATCTTGGACATCATTCTC
TCGGCCTGTATAGATGATACATCGTCCGGAGGAAAATACCAGTATCCAGAATCTGCTAAA
GTACACCAGGTGGTGTGCGCTCTGCTGCGGTGCTGCGACGTTAGCGGGCGGTGTCAGTCG
GCGGCGGAGGGCGCGGCGCCGTTGCCCAACCCGTACGCCGAGCCGCCGCACGTGGCGCCC
GCCGACCGACATGTCATGTCACCCCTCGTTGCCGACATACTCTACAACAGATCCGGGACG
TACATGAAGAAACTGACAGAGGAGTGTTGCGGCTGCGAGGAAGGCATCCGTATACTACAG
TTTCTGTGCTGGGAAAACGCGGGCTGGTCTCGGCTGGCTCTGTCCGAGCTGTTGTGGCAG
ATGGCGTACGCGTACTGCCACGAGCTGCGGCGCCACGCCGACGCGCTCACCGCGCTGCTG
CTCATGGAGGACAGCTGGCAACAGCGACGCATACATAACGTTATCAAGGGTGTGTCTGAG
GAGAGGCCGGGACTGCTGGAGACGGCGGCCCGCTCGCGCGGACACTACCAGAAGCGTGCG
TACGCGTGCGTGAAGCTCGTGGTAGGCGTCATGTGCCGCACGCCGCTCGCAGTGCGCGCC
GTGCACACGCAGGCCGACGCGCGGCGCCGCTGGAGGCAGCTGCTCGCCTGGCTGCAGGAC
GAACTCGATCGCTACGGTCCAGGATACGGGTCATACGGCACGTGGTCTCCGCCAGGAACC
TCAAATGAAACGTCCAGCGGATACTTCCTCGAACGCAGTAACTCTGCGAGGAAAACTCTA
GAAAAAGCATATCAGCTGTGTCCGGACGAAGATGAGGAAGAAGAAGAAGAAGGTCGGGAG
GTTGCCGAAGGCTCCGGGTCGGGCGAGCCTGGCGAGGACAGCGGCGACGAGGACGAACCA
CCAGACGACGAGCCCCGACGTCTGCAGCCCCACGCGCTCTCCGGAGTCTGAATGTGCTCG
CTC
(2943 bp)

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