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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40106_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_25_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:0.57 TPM:0.45
ORF EntryO_BomoMG16153_complete:A_BomoMG_comp40106_c0_seq1
Sequence
(Nucleotide)
GGCGGTCGCGGAAGTAGTGGTCCCGGAGCGCGTCCAGCTCGTCCTGCTCGCGGCGCCGCT
CGCGCGAGTCGCCCTCTGCCTCGCGCACGCGCCCGCTCAGCCGCCGCTGCAGCTCCTTGC
CTTTGTAATATTTGTGATCATCTCTCTCGTCGTCATAATCTTCCAGGAACTCCTTAAGTC
GTTTGGCCTCTCTCTCCCTCTCCTCCTCGCGAATTCGCTCCCTCTCTTTTTCTTTCTCAT
AATCTTTAGCTTTGCGCCGCTCTCGTCCCTCCCAGTTCCGCAACCTCTCCTGGTAGGCGG
CCTCCTTCTCCTTGGCCTTCTTGTCGAGTCTCTTCCTGTCCCGCGCTTCCTCCTCCATCT
CCTTGTCCCTCCTGGCGTCCACCTCGCTCCGCCCCCGCTCTCGCGACCGGGACCTCTCCC
GCTCCCGCTCCCGCTCTCGCTCGCGCTCGCGTTCTCGTTCCCTCTCCCGCTCCCGCTCGC
GCTCGCGCTCTCTCTCTCTGTCTCTCTCTCGCTCCCTTTCTCGTTCCCTTTCTCGTTGTT
CACGTTCTCTGTCCCTCTCGCGCAGCTCTCTTTCTCGCTCTCTTTCCCGTTCTCTCTCCC
GCTCTCTATCCCTCTCTCGCTCGTCTCGTTCCCTGTCCTTGTCGCGGTCTTCGCGCCGGT
CCTTACTCCTGGAGGCGCTTCTCCTGCGGCGATCCTTCTCCCTGTCTCTGTCTCGTTCTC
TATCTCTGTCCTTGTCGCGCTCACGATCGCGATCCTTCTCCCTCTCTCTTTCTCTGTCTT
TGTCTTTTTCCTTGTCCTTTTCGTCCTTGGGATCTTTTTTCCTTCTGCCAATCACGTCGG
CCTCCTCCTGCGCCCAAAAGCCAAAAGTCTCATCGCACTGCAATACAAGCTCACGTCCAA
TAGGAATGCGGGACTCGCGGGACCGACTATGCATCACCGTCCTTGTCTATTCATTTAGAA
TAGAAAGAAACAATGTTATAATATCTACAGCGTCTGCAAAAAAAATATATCTACCACAGT
AGCAGTTGAAAGGCATTCTCACAATTTATGCAAAAATATGATATGTTTAGACGCGAAGAA
GCCAACAAATGAGGCAGCAGGTGTCGGCCGGCGCGGCGATGTGGTCACCGCTGTACTACG
ACCTCAACGTTCGACTGATCTGTTGTGGGACGACTTATTATTTCCATAACAAAATTAATA
CCGGCGCGAAGTCACTTGCTCCTACTTCAGGCTCTGCACAAAGATTCAGTTTCCTTGCAA
CCGTCGTTGGTGACGTTAGTTCTCTCTTCATGTCGCGGGTAGAGGGAGGCGCGGTCGGGC
GGTACCTTCACGCGACAGTCCGGACACGAACAACAAGGGAACACTTATGTATGATGTATT
GTGAAAGATAATATCCAAGAGGCAATTTATTGTGTTATGTTTTATGATTACTGTATCTCT
ATGCTAGCAACAGATTAAATTGGAGGACATTTAGATCGAAACAATAATAAACATGATAGT
CCATAATCTGTACCGGCGCCACTAATGAGGCTGAGGGGCTTTCGGGATCTACCGGTAGAT
CAGTCCTCGTGTTCTGCGGGCGCCGACCGCGCGCGGTTGTGTACGTGTGCGTGTGTGTGT
GTGTATGTGTGACGCGTGTGCCTGGCGTGGGAGCAGCCGATGACTGGTGTTACTTACTAT
GGGGTCCGAGGGTCGGGGACGACGTGACGAGGCGACGGCTCGCGCCAGTGGGATCCCGCG
ACGTGTCCCGCGATGTCGCCGACGGATAGGTCGCGGCGCCGCCCGCCCCGCACAGCCAGT
GCGGCGCCGCACGCTGTGCGAGACGGGCGCGCCCGCCGCGAGTCCACAACTCACGAATGC
GGACTCGCGACCGAGCAGACTCACAACGAAACGGATCTCTGCCGATCGGCACGTCAATGA
AACGCAAATAGCTTCTTCAAAGTTATTCCGCAAGATTAATTATATTATTGAACATCTACA
TCTTTACTGAAAACAATTCGTTTCATTAAGAAGTCTGCCGATATAAATCAATTAAAGTAA
ATAATATGTGTAATAGAAATAAACCATGTCGAATGATAATGTGAGCCCAACGAGTGTCCG
TGTTACTAATGTGGTGTAGGACTCGTGTGCGGTGACGTCACAGTGTGACGCGCCGTGTGG
CGTGTGTGGTGTGGGGTGTGGGGTGCGGTATGGAGTGGACTCACCGTACGTACTAGTCAC
GGCAGGACTCGCTTCACCGCCTCGCCACCTTCATGCTCTCGCGGAACTTGCCAATCTCGC
GGTGGATGACGTCACGTTTCTCCTCCGAGATGTCTGCCTCCTCCAGAACGCGCGCCGTCT
TAGAGATGGCCTCCTCTTTCTGTATGATGTCATAGTTGTTGATGTCGTCCTGGTACTCCA
CCGCGATCTGCTGCAGGCGCGCCTCCGCCGCCTCGTCCAGCGCCCGCTGCCGCGCGTCCA
GGTACCCGCCCCCCGCGCCCGCCGCGCCGCCCCCCGCGCCCTCCTCCAGCCGGGACCGCT
GCTCCGTCTTGTAAGAATCAACTAGAGCCTGCATCTTGCCATCAGTACGAGCCAACAAGC
GCTTGTCTCCCAGCTCCCTATCATTGAGAAGTCGAACACATCGGAGAGCAGCTTCCGGAC
CTCCAAATTCACAGAACCCAAAAGTGGAGACTCTCTTCCATGTGAGTACAGTCCCGCACG
CATTGAGCATTGAACGTATCATTGTGTCAGGGGCTCTAGATGATAAATTTCCAATAAACA
CAGTGACAGGGGGTCCTTCAACATCTTTAGCACCATTTGTGTTACGAGTTGGACCTCTGG
CAATGACAGCTTTCCCCGCCTGTGGAGCTCCCGGTGCGGGCAATAATGCTCCACGACCTC
CAGTGTTTGTTGTACCATATGCACCGACCATTACATGGGTAGGCATTGACATGGTGACCA
CGCCAGGAGCGATGCCGTACGGCACAAGCGGCGGCCGCGGCGGGAACGACATCTCGACGG
ACGCTCTTCGTTCCTGTTTCTTAGTTTTCTTTATACAAAGTAACACTCAATTAAACCACA
ACGTCAATTTTATACATCAAAGATTCACGATCAGATGAAAGTATCACTTTAAACTTAACA
ATTTGCAATTATCTTAGATCTACAAACACTTAATCCAATTCATGAACAATTAAAATACAG
ATCGATTACAAAACATCTTCTATTAAAGAAACGCCATGATACTCAAACGTCGCCATCTTT
TATAAATACTAGAGTAATCAGTAAAATGTTGAATATTTC
(3279 bp)

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