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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40090_c0_seq2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_gem-associated_protein_5-like_[Bombyx_mori]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016604 C nuclear body
GO:0017069 F snRNA binding
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:2.71 TPM:2.14
ORF EntryO_BomoMG16104_5prime_partial:A_BomoMG_comp40090_c0_seq2
Sequence
(Nucleotide)
GCAATCCATTGGTAATTGATTGCAAGAATAAATTAGACTGGAAAATAGTCCACAGTCTAC
ATAAGCGCGGATTGTATTCCTTGACAACGAATGCTCCAAGAGTTCAGACAGAAGCTGACA
AACACAAAATCTGGTCAGTGTGGTCTACGTCACAGGACAGAAATATCATAGAATATTGTG
TCGAGAAACGGGAGAAAGTAGCCGTACATGCCACCTGTGGACGTTTTGTGTATTGCATAC
GGAGCTGCCCCTATGACGCGGGCAAAATAGCAATAAGCGTTGGAGATGGTACAGTTCGCA
TCTGGGAAACCAATACACTGGATCATGATGATACTAAACTTGCTGCTGGCACCATTACTG
CCTACTGGCAGAATGTTCAAGGAAGAGTTTTGACATTAGCCTGGCATCCGACAAAAGAAA
ATTGGCTAGCCTTCAGCACTGCCGAGTCCAGAGTGGGGATCCTGGACACGAGCGGTCGCG
GCGCCCGCGCGCTGGTGCCGGGGCTGGCGGGCGGCGTGTACTCGCTGTGCTGGGGGCTGC
GCTCGCACCTGTACGCCTGCGCCTCCGGACAACTCGTCGTGTACGACGCCGCCAGACCGG
ACCAACCCCCAGTACCAGTAGGAGTGGAGTTCGAAGGGCAAAAGTGGGAAATTAGTTCTA
TTAGCTGGAGTAGTCGCGGCTTTCTGGTGGGCAGTAACTCTGGTGGTGTTGCAGTACTCA
CGCACGAATTACCTCATACAGTCACGGCTGCTGTGTTTGCATTCAGTAAAATGATTCATT
CAATAGATTGGCACCCTCAACAAACTTCTAATTCAAATGAAGAATCTCCTTTAAAAGATA
TGATTGCGGTTTGTTCATTGGACAATCAAAACACAATTATAATACTCGAGTATAGTGATA
AAGGCGATCACGGACAGCTGACAACATGGAAAACGTTACGAGGCCACAAGGGAACCGTGT
TCGAAGCGTCTTGGAACCCGCATCATGACGATCTGCTGCTGTCCACGTCTTCCGACGCCA
CAGTGCGGGTGTGGGCGGCGTCTAGTGGCGCCTGCGTGTCTGTGTTCGACGGGCACATGG
CGCAGAGCGCGCTGGGCGCGGCGTGGAGCGCCTACCCGCAGCTCGCCACCAAGGCGCTGT
CCGGGGGAGGAGACCACACGCTGAGGCTGTGGGACATGAACGACTTCCCCGCCGAAGCAT
ACGACGAAAACAAATACGAACCTTTAAAGAAAGATAAAAATAAGAAAGAGAAAAAGGAAG
TAAAAAAAGAAGATGAGACCGCCAGTAGTGAAGTGGCAACCCTGAATCTGGCAGCGCAAG
ACAAAACGAAGTCGGCGAAAAGGTTTTTACTCCCGATATTGTGCAAACAAGCTTTGGGCT
GTACGGACGGCTTAATAAGGAGAATGTTTGAAAAGTATGGACTGAAATCATCCACGAGTC
CGTTCACTATCGAGAGAGTCCAGGCTAGTTCAGGCGAGAATATAAAATGCGATGGAGTAG
ACAATGGACTTAATAGCGAAATAATAGAAGAAAACAAGGGTAAAGACTACGGTGCCGATT
TCATTAAAATATTCGGAACTATTCAGGAAGTTAACGAGGTCTTAGATAAGGAACAAACAC
GTCATTTAGAATTGTCCAATATTGAATCATGGATGATGCTGTCGATATTCCGGGGGCACA
TCGACGCCACCATACAATACGCAAGCCAAAACGATTTGCTCTGTCCGTATCTACTTAGTT
TGACGCCTTGCGTCTCGCTCAAGTACTGGAAGGATGCCACACAATTATATTTAGCACAAA
TAGATCGACTGGTAGCGAAGACTGAAGGTCATAAACTATATGAGAACAAGTACTACGGCG
GGCCGGTGTACCGCAAGGCGCTCACGCGGCTGAGCACGCACGACGTGCGGGGCGCCGTCG
CGACACTCGCAGAAAACAAACTATACAAAGAAGCATACGTCCTTTGTCGTGTCAGGTACA
TGGACAGCATTGCAACACAAATTCTGCACCAATGGGCAAATTACTCCAACCTTTGCGGGA
ATTTTGAAATAGCCACAGTTTGTTTTATTGCTTTAGGAGATTTATCCGAAGCAGCCACGG
TGCTCGCGAAGTCAAAGAAACAAGAAAACTTGTGTTTAGCAGCGGAAATAGCTAAGGCAG
CCGGTCGGGCCACTCTAGCTGATCACATCGAGAAAAAGGCACAAAACACAATCCCATCAA
CTTCAGATGAAACTGAAGAAATTTTGAAAGAACTCCCCACTAAAATGGAATTGCTTTTAA
AGCAAAACAATAATTCAGAAGATAAGGCAGTGAATTCGGAAGACGAAGAGCCGGTTGGAA
ACTTAGTTGAGTAAAAATACAGGGATTGACGACTGTTATGATTGATATTTTTTAATGTTG
TATCGTGAAAGGGTTTTAAAAATCCTAACTTTTCGTTTTATGAGTTTTGTGAAGTATTTT
TAACTGTGTACAACGTGCACAATAGGCTTAAGCGATCAATGATATCTTGTGCACGATCTC
GATTACAACTAAAATATTGTTGAGGCTTGAAATGATGAAAATATTCGGGTTATGCGTGTT
ACAGTCAAACTTTTTGTTTTTAGTGCCTGAAACTG
(2615 bp)

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