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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40088_c0_seq4
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:2.09 TPM:1.65
ORF EntryO_BomoMG16098_complete:A_BomoMG_comp40088_c0_seq4
Sequence
(Nucleotide)
TGACAGCGTTGTGTCCATTATTGTTGAAATGCTCACGGAAAATTATCAAAAATGGCATCA
AAATGGACTAGACGTCGTAGTGAAGCCGGTATATTAAGAAAGAATGAAATCAATGAGAAA
AAAGAAGAGTTACTCGTGTTCGGCTATTCATGCAAAATATTCAGGGACGATGACAAAGCT
TTGTTCATTGATCAAGGGAAACACCTCATTCCGTGGATGGGGGATGAAACGTTGAAAATC
GACAGGTTCGATCCGTTTTTTACTATCAGACTGCTAACTGTGGTGCTAAAACCATAAAAA
ACGATAATAATTTGTCAGAATGTAATAAAATTTTGGAAGACTTATAAGATTTTCGCAGAG
GATGATGAGTAAAGCCTACAGCGGGACGGGACTTAGACAGGGGCGCGGGCCCGTCGTGGT
GACGTCTTTTCTTATGGTGACACTCTCCGGTGGTATGTATAACTTACAACGGAATAATTG
AGTATGTATAAAAATGTAATCTAATTGTTTCACATGCGAATGATGTTACCATAGTTTATT
ATTAAAATTTTGATTATGGTTACGTTGTATATGCTGTTTATAGTATTAAAAACGAAGTGT
ATTTAGTATAAATCTACAGTTGAAATAATTTATGTAATTTACCGGTAACAATGAAACTTC
CAATGGATGTACTGAAAGCTAAAATGTCATTCAACATAGGAAATAAAAATTGGAAATTAT
ATTAAAAACCTCACATTATTTGCAGGTCTAATGACAAGATAGTTCATGGATTATCATGCT
ATTTATGTGAACAGGTATGATGCAAGAGGAGCCCTACACGATGTGTCAGCATTGGAAGCC
CCGCCGGGAGGATACGACTGGCGGGTGGAGTTAACAAAATCTGAGCTTGATGTGGAGCAA
CTATGCGATGATGAACGTTACCGAGCTCTATACACAAATGAAGATGAAGAAGAAATGTAC
AAAGAGGAAGAACTGAAGCGTCTCCATGCGGCTGGTTACGGACAAGTTGGTTTCAATTAT
GATACATTAGCTCCACCTAAGCCACCCGCGAAGCCAGTTGAGGTAGATGAACCATTTGTT
CCGTCTTCAACTCTTGAAACTCTGCTACCTGAAGATGTTGTTTTACCTGAGACACAAAAA
CTGAATGCCATCATAGAGAAGACAGCCAACTTTATAGCAAGTCAGGGTGTCCAGATGGAG
ATCCTCATCAAAGCCAAGCAGGGTGACAATCCTCAGTTCCAGTTCCTCAACAAAGACTCC
CCTTTGCACCCATATTATAGTGCGCTCATCGCACTCATCAAAGCCGGTAAATGGCCTGAG
AAGAAAGTCGATTCTGTTGAAGAACGACCACCTGACAATGATGAATATCTCCATCCAAGC
TTAGCATCAACCATAATTGAATCTGCTCCATCGATTCCGAGCATCCAATACAAGCCATCA
GCGGACTGCGACTACACGATGCTGGTGTCCAGCCTGGTGGGGCCGCCGCCCGAGGAGCCT
TGTCCCGGGGAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCTCCGCATCCCCACATTTCC
AAGGAACCCGTCATGTATAACACGCAAGGAACATCGGATCCAAGGCTACAAGCAGCACAG
ACAACGTACTACCAGCAGTACGCAGCGTACTACCACCAGTACATGGCGCAGGCTGAAGCA
CAAGCACGTGCGGAACAAAAAAAAGAAATCACCGTAACCAAATCTACTGGACTTAGTCTC
ATGAAGAACTATAACTCTGATTCCGGGTCCGACGATACTGATTCCGAAGATTCTTCGTCA
TCGGACAGTAAAGATCAAATAATATTGACGCCCCCGGAAGACGTTCAGACGGTGATCGAC
AAGATGGCCGCCTACGTTGCACGAAATGGCGACGAGTTCGCCGACATAGTGCGTTCGAAA
AACGATCCCAGGTTCACGTTTCTGGAGCCCGATCACGAATATCATCCGTATTATAAAAGA
TTACTGCAGCAGAAGAAAGGCGTCGACGTGAATGGAAAGAAAAAGGACAAGAAGAATTCT
TTGCCTGTTTCTTTTTCTATAAAGAAATTGAAAGAGCCCGATCCTATTTTGCCGAAACCG
GCTCTGCCTTACGAGTCGAGTACGGACGACGAGAACGAGGAGAAGCAAACGGAAAATCAG
GAACACATTGAGCCAAAGGACCACACCAAATTAGTCGCTCAGACCCCAAGTGTGCTTCCG
CCCATAGTAGTGTACAAGATGGACGGGTTGATCCACGATTTCCCCGTCGTCAGAACGATC
GAGCCGGTCAAGCCGACATCCCAAACAAGCCCACCGAAGCTCACGCCAGTTATACACGAA
GTAAAAGAAATACCTAAAATAGATCCTCCCGGTCTCGTAGAGAAGCCACAACTCGTCGGA
CCGGTAACTAATACTTATGTCAAGGAAAACACGCATAAAACAAGAGAAGATAACTCGGAA
CGTAGAAAAGAGAGAAAGAAAGATCGCAAGAAAGAATACAAATCGAAATCTAGGAGTAGA
AGTAAGAGAAGAAGTCCGGTGAGGAATTCCGTGAAAGAAAAAAAACGGGAAAAAGATGAG
AAAGTTAGTAGTAGTAAGAAGAGTGAACCAGTCAAGGAAAACTTTCCGACCGAAATTATT
TCGCTAGAAGACAACGGAGATGATTTGATTGATCTCACCGGCGATCAGTCCGACAGTAAA
CTGGAGGGCGAGGCGGAGCACGGGCGGGAGAGGCAGCGGGAGCGGCGGCGGCGCGCGGCC
GAGTTCCTCAAGAAGGTGGGCGTGGACCCCGGGGCCGCCGCGCTGCCCACCTCCTCGCTG
GCCAGCGCCATGGTTGATACGTTGGAGTCTTTGAAACGTAAGAAAGCGGAAGAAGAAGAA
AAAAGACGGAGAAGAGAAAAGAGAAGACATCGAGAAAAATATTACGACGATGAGTCTCAA
AAAATGCATCATAAAAGCAAAAGAAGAAGGCGCAGATCGTCTGAAAGCGAAGACGCCGAT
AATGATGGCTCGAAAAATAAGAAGCGCAAGAAGGAAAAGAAACACGCCTCGAAAAGCAAG
AAGAAGAGAAGAAAAGAGGACGAAGACAGTGAGCAGAGGTTGCCGGACATTGACCTCACG
CACACCCTCAAGGAGCTGCGGACCAACTCTCCGACCAAAGACTTGGTGCTTCAGAACTTG
GAAGTTAACACGACCGCCAGACGGAACTCCGACGAGGACGTAGCTAAGAATAGAAAGAGA
AAGAAAGACAGAGAGTACAGCGAGGGCGAGTGGTCTAGCGATAGTGAGGAAGATTCAAAG
TCTTCGGAGAGTCAGCACGGATAATATTAAGTTTTATTTTTTTGTATCCGTTGAAGATAG
CAATGATTGTCGTTGTATGGACATTATTATTAGCTCTGTGAGTTTAGAAGCAACGATTCG
CTTAGTTACTAGGCAGTGTGATTGTTGAAAATGATAATATCAAGAGATAAAAGGGTTAAT
TGGTTTAATAAGCTTAATACGCGACCATTTATTTTTGTAATTAAAATTTTGTTTTATTTG
ATACTAACGACCAGCACTCGCTTCGCTTCGGAAACATTAA
(3580 bp)

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