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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40088_c0_seq2
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:1.07 TPM:0.85
ORF EntryO_BomoMG16095_complete:A_BomoMG_comp40088_c0_seq2
Sequence
(Nucleotide)
TGACAGCGTTGTGTCCATTATTGTTGAAATGCTCACGGAAAATTATCAAAAATGGCATCA
AAATGGACTAGACGTCGTAGTGAAGCCGGTATATTAAGAAAGAATGAAATCAATGAGAAA
AAAGAAGAGTTACTCGTGTTCGGCTATTCATGCAAAATATTCAGGGACGATGACAAAGCT
TTGTTCATTGATCAAGGGAAACACCTCATTCCGTGGATGGGGGATGAAACGTTGAAAATC
GACAGGTTCGATCCGTTTTTTACTATCAGACTGCTAACTGTGGTGCTAAAACCATAAAAA
ACGATAATAATTTGTCAGAATGTAATAAAATTTTGGAAGACTTATAAGATTTTCGCAGAG
GATGATGAGTAAAGCCTACAGCGGGACGGGACTTAGACAGGGGCGCGGGCCCGTCGTGGT
GACGTCTTTTCTTATGGTGACACTCTCCGGTGGTATGATGCAAGAGGAGCCCTACACGAT
GTGTCAGCATTGGAAGCCCCGCCGGGAGGATACGACTGGCGGGTGGAGTTAACAAAATCT
GAGCTTGATGTGGAGCAACTATGCGATGATGAACGTTACCGAGCTCTATACACAAATGAA
GATGAAGAAGAAATGTACAAAGAGGAAGAACTGAAGCGTCTCCATGCGGCTGGTTACGGA
CAAGTTGGTTTCAATTATGATACATTAGCTCCACCTAAGCCACCCGCGAAGCCAGTTGAG
GTAGATGAACCATTTGTTCCGTCTTCAACTCTTGAAACTCTGCTACCTGAAGATGTTGTT
TTACCTGAGACACAAAAACTGAATGCCATCATAGAGAAGACAGCCAACTTTATAGCAAGT
CAGGGTGTCCAGATGGAGATCCTCATCAAAGCCAAGCAGGGTGACAATCCTCAGTTCCAG
TTCCTCAACAAAGACTCCCCTTTGCACCCATATTATAGTGCGCTCATCGCACTCATCAAA
GCCGGTAAATGGCCTGAGAAGAAAGTCGATTCTGTTGAAGAACGACCACCTGACAATGAT
GAATATCTCCATCCAAGCTTAGCATCAACCATAATTGAATCTGCTCCATCGATTCCGAGC
ATCCAATACAAGCCATCAGCGGACTGCGACTACACGATGCTGGTGTCCAGCCTGGTGGGG
CCGCCGCCCGAGGAGCCTTGTCCCGGGGAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCT
CCGCATCCCCACATTTCCAAGGAACCCGTCATGTATAACACGCAAGGAACATCGGATCCA
AGGCTACAAGCAGCACAGACAACGTACTACCAGCAGTACGCAGCGTACTACCACCAGTAC
ATGGCGCAGGCTGAAGCACAAGCACGTGCGGAACAAAAAAAAGAAATCACCGTAACCAAA
TCTACTGGACTTAGTCTCATGAAGAACTATAACTCTGATTCCGGGTCCGACGATACTGAT
TCCGAAGATTCTTCGTCATCGGACAGTAAAGATCAAATAATATTGACGCCCCCGGAAGAC
GTTCAGACGGTGATCGACAAGATGGCCGCCTACGTTGCACGAAATGGCGACGAGTTCGCC
GACATAGTGCGTTCGAAAAACGATCCCAGGTTCACGTTTCTGGAGCCCGATCACGAATAT
CATCCGTATTATAAAAGATTACTGCAGCAGAAGAAAGGCGTCGACGTGAATGGAAAGAAA
AAGGACAAGAAGAATTCTTTGCCTGTTTCTTTTTCTATAAAGAAATTGAAAGAGCCCGAT
CCTATTTTGCCGAAACCGGCTCTGCCTTACGAGTCGAGTACGGACGACGAGAACGAGGAG
AAGCAAACGGAAAATCAGGAACACATTGAGCCAAAGGACCACACCAAATTAGTCGCTCAG
ACCCCAAGTGTGCTTCCGCCCATAGTAGTGTACAAGATGGACGGGTTGATCCACGATTTC
CCCGTCGTCAGAACGATCGAGCCGGTCAAGCCGACATCCCAAACAAGCCCACCGAAGCTC
ACGCCAGTTATACACGAAGTAAAAGAAATACCTAAAATAGATCCTCCCGGTCTCGTAGAG
AAGCCACAACTCGTCGGACCGGTAACTAATACTTATGTCAAGGAAAACACGCATAAAACA
AGAGAAGATAACTCGGAACGTAGAAAAGAGAGAAAGAAAGATCGCAAGAAAGAATACAAA
TCGAAATCTAGGAGTAGAAGTAAGAGAAGAAGTCCGGTGAGGAATTCCGTGAAAGAAAAA
AAACGGGAAAAAGATGAGAAAGTTAGTAGTAGTAAGAAGAGTGAACCAGTCAAGGAAAAC
TTTCCGACCGAAATTATTTCGCTAGAAGACAACGGAGATGATTTGATTGATCTCACCGGC
GATCAGTCCGACAGTAAACTGGAGGGCGAGGCGGAGCACGGGCGGGAGAGGCAGCGGGAG
CGGCGGCGGCGCGCGGCCGAGTTCCTCAAGAAGGTGGGCGTGGACCCCGGGGCCGCCGCG
CTGCCCACCTCCTCGCTGGCCAGCGCCATGGTTGATACGTTGGAGTCTTTGAAACGTAAG
AAAGCGGAAGAAGAAGAAAAAAGACGGAGAAGAGAAAAGAGAAGACATCGAGAAAAATAT
TACGACGATGAGTCTCAAAAAATGCATCATAAAAGCAAAAGAAGAAGGCGCAGATCGTCT
GAAAGCGAAGACGCCGATAATGATGGCTCGAAAAATAAGAAGCGCAAGAAGGAAAAGAAA
CACGCCTCGAAAAGCAAGAAGAAGAGAAGAAAAGAGGACGAAGACAGTGAGCAGAGGTTG
CCGGACATTGACCTCACGCACACCCTCAAGGAGCTGCGGACCAACTCTCCGACCAAAGAC
TTGGTGCTTCAGAACTTGGAAGTTAACACGACCGCCAGACGGAACTCCGACGAGGACGTA
GCTAAGAATAGAAAGAGAAAGAAAGACAGAGAGTACAGCGAGGGCGAGTGGTCTAGCGAT
AGTGAGGAAGATTCAAAGTCTTCGGAGAGTCAGCACGGATAATATTAAGTTTTATTTTTT
TGTATCCGTTGAAGATAGCAATGATTGTCGTTGTATGGACATTATTATTAGCTCTGTGAG
TTTAGAAGCAACGATTCGCTTAGTTACTAGGCAGTGTGATTGTTGAAAATGATAATATCA
AGAGATAAAAGGGTTAATTGGTTTAATAAGCTTAATACGCGACCATTTATTTTTGTAATT
AAAATTTTGTTTTATTTGATACTAACGACCAGCACTCGCTTCGCTTCGGAAACATTAA
(3238 bp)

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