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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40088_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:1.56 TPM:1.24
ORF EntryO_BomoMG16093_complete:A_BomoMG_comp40088_c0_seq1
Sequence
(Nucleotide)
TGACAGCGTTGTGTCCATTATTGTTGAAATGCTCACGGAAAATTATCAAAAATGGCATCA
AAATGGACTAGACGTCGTAGTGAAGCCGGTATATTAAGAAAGAATGAAATCAATGAGAAA
AAAGAAGAGTTACTCGTGTTCGGCTATTCATGCAAAATATTCAGGGACGATGACAAAGCT
TTGTTCATTGATCAAGGGAAACACCTCATTCCGTGGATGGGGGATGAAACGTTGAAAATC
GACAGGTATGATGCAAGAGGAGCCCTACACGATGTGTCAGCATTGGAAGCCCCGCCGGGA
GGATACGACTGGCGGGTGGAGTTAACAAAATCTGAGCTTGATGTGGAGCAACTATGCGAT
GATGAACGTTACCGAGCTCTATACACAAATGAAGATGAAGAAGAAATGTACAAAGAGGAA
GAACTGAAGCGTCTCCATGCGGCTGGTTACGGACAAGTTGGTTTCAATTATGATACATTA
GCTCCACCTAAGCCACCCGCGAAGCCAGTTGAGGTAGATGAACCATTTGTTCCGTCTTCA
ACTCTTGAAACTCTGCTACCTGAAGATGTTGTTTTACCTGAGACACAAAAACTGAATGCC
ATCATAGAGAAGACAGCCAACTTTATAGCAAGTCAGGGTGTCCAGATGGAGATCCTCATC
AAAGCCAAGCAGGGTGACAATCCTCAGTTCCAGTTCCTCAACAAAGACTCCCCTTTGCAC
CCATATTATAGTGCGCTCATCGCACTCATCAAAGCCGGTAAATGGCCTGAGAAGAAAGTC
GATTCTGTTGAAGAACGACCACCTGACAATGATGAATATCTCCATCCAAGCTTAGCATCA
ACCATAATTGAATCTGCTCCATCGATTCCGAGCATCCAATACAAGCCATCAGCGGACTGC
GACTACACGATGCTGGTGTCCAGCCTGGTGGGGCCGCCGCCCGAGGAGCCTTGTCCCGGG
GAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCTCCGCATCCCCACATTTCCAAGGAACCC
GTCATGTATAACACGCAAGGAACATCGGATCCAAGGCTACAAGCAGCACAGACAACGTAC
TACCAGCAGTACGCAGCGTACTACCACCAGTACATGGCGCAGGCTGAAGCACAAGCACGT
GCGGAACAAAAAAAAGAAATCACCGTAACCAAATCTACTGGACTTAGTCTCATGAAGAAC
TATAACTCTGATTCCGGGTCCGACGATACTGATTCCGAAGATTCTTCGTCATCGGACAGT
AAAGATCAAATAATATTGACGCCCCCGGAAGACGTTCAGACGGTGATCGACAAGATGGCC
GCCTACGTTGCACGAAATGGCGACGAGTTCGCCGACATAGTGCGTTCGAAAAACGATCCC
AGGTTCACGTTTCTGGAGCCCGATCACGAATATCATCCGTATTATAAAAGATTACTGCAG
CAGAAGAAAGGCGTCGACGTGAATGGAAAGAAAAAGGACAAGAAGAATTCTTTGCCTGTT
TCTTTTTCTATAAAGAAATTGAAAGAGCCCGATCCTATTTTGCCGAAACCGGCTCTGCCT
TACGAGTCGAGTACGGACGACGAGAACGAGGAGAAGCAAACGGAAAATCAGGAACACATT
GAGCCAAAGGACCACACCAAATTAGTCGCTCAGACCCCAAGTGTGCTTCCGCCCATAGTA
GTGTACAAGATGGACGGGTTGATCCACGATTTCCCCGTCGTCAGAACGATCGAGCCGGTC
AAGCCGACATCCCAAACAAGCCCACCGAAGCTCACGCCAGTTATACACGAAGTAAAAGAA
ATACCTAAAATAGATCCTCCCGGTCTCGTAGAGAAGCCACAACTCGTCGGACCGGTAACT
AATACTTATGTCAAGGAAAACACGCATAAAACAAGAGAAGATAACTCGGAACGTAGAAAA
GAGAGAAAGAAAGATCGCAAGAAAGAATACAAATCGAAATCTAGGAGTAGAAGTAAGAGA
AGAAGTCCGGTGAGGAATTCCGTGAAAGAAAAAAAACGGGAAAAAGATGAGAAAGTTAGT
AGTAGTAAGAAGAGTGAACCAGTCAAGGAAAACTTTCCGACCGAAATTATTTCGCTAGAA
GACAACGGAGATGATTTGATTGATCTCACCGGCGATCAGTCCGACAGTAAACTGGAGGGC
GAGGCGGAGCACGGGCGGGAGAGGCAGCGGGAGCGGCGGCGGCGCGCGGCCGAGTTCCTC
AAGAAGGTGGGCGTGGACCCCGGGGCCGCCGCGCTGCCCACCTCCTCGCTGGCCAGCGCC
ATGGTTGATACGTTGGAGTCTTTGAAACGTAAGAAAGCGGAAGAAGAAGAAAAAAGACGG
AGAAGAGAAAAGAGAAGACATCGAGAAAAATATTACGACGATGAGTCTCAAAAAATGCAT
CATAAAAGCAAAAGAAGAAGGCGCAGATCGTCTGAAAGCGAAGACGCCGATAATGATGGC
TCGAAAAATAAGAAGCGCAAGAAGGAAAAGAAACACGCCTCGAAAAGCAAGAAGAAGAGA
AGAAAAGAGGACGAAGACAGTGAGCAGAGGTTGCCGGACATTGACCTCACGCACACCCTC
AAGGAGCTGCGGACCAACTCTCCGACCAAAGACTTGGTGCTTCAGAACTTGGAAGTTAAC
ACGACCGCCAGACGGAACTCCGACGAGGACGTAGCTAAGAATAGAAAGAGAAAGAAAGAC
AGAGAGTACAGCGAGGGCGAGTGGTCTAGCGATAGTGAGGAAGATTCAAAGTCTTCGGAG
AGTCAGCACGGATAATATTAAGTTTTATTTTTTTGTATCCGTTGAAGATAGCAATGATTG
TCGTTGTATGGACATTATTATTAGCTCTGTGAGTTTAGAAGCAACGATTCGCTTAGTTAC
TAGGCAGTGTGATTGTTGAAAATGATAATATCAAGAGATAAAAGGGTTAATTGGTTTAAT
AAGCTTAATACGCGACCATTTATTTTTGTAATTAAAATTTTGTTTTATTTGATACTAACG
ACCAGCACTCGCTTCGCTTCGGAAACATTAA
(3031 bp)

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