SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40073_c0_seq2
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_LIM_and_senescent_cell_antigen-like-containing_domain_protein_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0043066 P negative regulation of apoptotic process
GO:0045216 P cell-cell junction organization
GO:0046872 F metal ion binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:2000178 P negative regulation of neural precursor cell proliferation
GO:2000346 P negative regulation of hepatocyte proliferation
GO:2001046 P positive regulation of integrin-mediated signaling pathway
Transcript
Level		FPKM:4.57 TPM:3.61
ORF EntryO_BomoMG16024_complete:A_BomoMG_comp40073_c0_seq2
Sequence
(Nucleotide)
ATTTTAATCCGGCCCGCCGAGAGTCCGTCCGTCCCAAATATTCTAGTCGGCAGTTTGGCG
CGTAAAATAAAATCTGACGTTTATAATTGAAAATCTTCGAATTTTTCAAAACTCCCCTCA
AAACACCCCTGACGAATTGGAGCTTTCATTATCTCATTTATTGGAGAAAAAAAAACATTT
TTCTATAATTCTGGCCCTCCTCTAGTATTTCCTAAACATTGTGGCCGCCATTAAAAATGT
TTGCCCACCACTGGTATAGACAGATTAATGTCGTTTATTCCTTGTATTTTTCGTTAACGG
CGGACCGTGTAGTGATGAGCCCGACGTAGCCGACGTCGTAGTTCAGCCGGGAACTTCTCG
TAGCAGCGTCTACAGGCGGGCCTCTCGTCGTATTCGTAGAACTTGCTACGCGTGCTCAGC
GGCGCATCGCAAACGGAACACGCAAAATGATGTACGCACCAAGCCTTGTTCAATGCGGTG
AATACGTCGCCGGCGATAACTTGATTACAGACGTAGCACAAATTGCCGAACAACTGGTGA
TAATGTTGTTCGCAGTAGGCCAAGCCTTTCTTTTCATAATGACGATGGCCGTGAAATGGT
TTCTCGCATTTGGCACAAACGAAATGCTCAACATGCCAATGTTTCCCGAGAGCAGTAACG
ATTCTCTCCTCGATGGGACGTCGGCAAGCACCGCAGATTGGAATACCCATTTTATCATGG
CAACGAAGACAAAAGAGGTTATTAACATCATTTGCAGCATATCCAGGACGATTTTTCACT
TCTCTGGCTGTATGATCCAGCTCAACTCCACAGGTAGCACAGGTAAAGTGATAGCCATGG
TAAACTTCTCCCCGATAACGTAAAGGTTCTCCGTCAATTACTCCATGGCACTTATGACAC
ATGTAGTTCTGCAGCCCATCCGCTTTGATACGCGCGTTACATACATGGCACAATGCTCGA
CCAGCATGCTTGATAAAACCGGCATCTGCAAGCTCTACATTACACTCTTCACATCGGAAG
CAGGCCGGATGCCAATTAGAGTTCATCGCCTTTATAACGCGGCCAATCACAAACTCTCCA
CACTTTGCACAGCATGGTGCAAATAAAACTTGGAAATCCTGTTCACAATACTTTCGTCCC
TCAAATTCATAGAAGACACCATCAGGAAACATGCGAAAGCACTGGGCACAAACAAAACAA
TTTGTATGCCATAATTCTCCATTGGAGTTCACAATTTTCTCATTTGGCTCAAATCCATCC
CCACAGCGAGTACAATACATATTATCAAGAGACATCGTAGCTAAGCCAGGCATTTTTCAC
TTCAAATGTACTCAAATCTAATTAACGAGAACTCCAGAATACTTCTGCAGGAAAGAATTA
CATTACTCACAAGTCAATTAATACAATTAAACAAATGAATAGTCAACAACTGCAATTTAA
A
(1441 bp)

- SilkBase 1999-2023 -