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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40057_c0_seq31
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		PREDICTED:_splicing_factor_arginine/serine-rich_6_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0016607 C nuclear speck
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035062 C omega speckle
GO:0035327 C euchromatin
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.80 TPM:0.63
ORF EntryO_BomoMG15978_complete:A_BomoMG_comp40057_c0_seq31
Sequence
(Nucleotide)
AGATTATACAGTTTTAATGCGAGACGAAATGTTTAGTAAACGCAAACATCGCAGTCACGA
TATGGAACTTTCAATTAAATCAAAAAAGTATTCATCTTCAAGTCTAATTGCTATCGTTGT
AAGTTTAATATTAATCACCACTACGCGGTGAGCGGTCCGTGCTTCCGTCGCGGTCCTGAG
CTTCGCCGTTTTGTCTTGGAGACCTGGACCTAGAACGGGATCCGGATCGGTCCCGCGAGA
CGGACCGGCCTCGGGACACGGACCTGGACCGGGAGCGAGACCGAGACCTAGACCGGGACT
TGGTCGGACGACGCTCTTCCTCCCGCTTCGGGGACGCTTCCTTGCTGCGAGACCGAGATC
TCTCCTTGGAGTCGGCTTTGATGTCGCGGGACTTGGAGCGGTCGTCGGAGCGGCGCCCGT
TGCGGTCGGCGTGGGCGGGCTCCGAGCGGGAGCGGGAGCGAGAGCGGCTGCCGGCGCGGT
GTCCGCGACCCCCACCCTCCTCGTCTTTGTTACGGCCATTGGAACGCGATCTAGAGCGAG
ATTTAGCAGCAGGGCTCTTGCTCTTCTGTCTAGATTTAGAACGAGATGAACGGCGTGATC
TGGATCGCGAGCGCCTCCTGTCCCGGGAGCGGGAGCGCGAGCGGCTGGACGAGGAGCGCG
TGCGCCGGCGCGACGACCTCCGATCCTCCACGAGTCGCACGCGCCGTCCGTTCAGTTCCG
TACCGTCCAGTTTCTCAATGGCGGCCCGCATGTCCGAGTGCGTCGCAAATTCTACCACAC
CTTCATTCCTGTGTTGTTTATGGGCGTCAGCGTAAGTCACTTCGCCAGCTTGACGCATAT
AGTCTTTCAAATCCTGTAAATGAAGGCTTCATTTAGTTTTTTGTTTTGTATCAAAAGAAT
AAATTGTTTCTTCGGTCTTCATCAGAATATTATAGTATCATCAAGACTTTCAGCCCCGAA
AGATGGTTAAAATAAAATATCATCATTATTGTTTATACGAAAAATCTTATGAATAGTATA
CGATTTACAATACATTCCTGAAATTAACTAACATAATGGATATGAATATGAAAGGCAAGT
AATGCAGTATTTTCGTATGCGATTACTAATAGGTATTATTGTTTACATGTTAAGAAATGT
CGCATTTTCATATGTGCGATGTCCTTTATTTGGCTTTTCGATTCTCATTATTATGTTTTG
GCTCTGAATTCCTCCCTGGATATCTTCATCCTTTTAAAGGTAATATTCATCATGAGTCAG
ATTCAGTCATCACATGGCCTCTAGTCACTTCCTGCACCAGCTACAGTCACTAGCCTCGGA
TGGTGGACACTTCCTTCTGGGTTGGACTTGTTTGGACTCTCCATATAAACATCTAAAAGT
AGCATCTTCTTCAGTTCGCTATTTGACCCTGGTCCGATGCGCAACTTCGGAAATTAGTTT
CATATTGGATTGACTTCATAACAAATCTTTAGATTCATTCTTTGATCCTGTCTCTCCTTT
GAAAATCTTCTTGGTTCAGTACAGCCTTGTCATTCCGTAACCGCCTTTGACAATGTAAGC
AATAATACCATCAAGTCAGCGCAGACGAAAAACGCAAAACGATTCATGTAAATAAAATTG
AAAGTCACAATAGTTTTTATAATATAGAACATTGTGAACTGTAGTAAAATAAAAGATATA
CTTAAAATGTAAGTGTTGTGATGTCGGTTGTGTCCATCGGTTGGTGTAGCCCCGACATTA
CCTGGCGGGCTGCTCGCATGCGGGCGCCGGACGACGCGGCGCAACTCTACATCGCCTGAG
ACCACATCACACAGCGCAACGCACATCGACCGGACTGGCCACCTTCTGTTGTTTTTAAAA
ATCATTCCATAAGCTCGAAGGCAACTCTGATACTAGATTACAATTTAACATTATATTATA
TGCAAACTTTAGCAAATGTCATGTTTAAACTAAGTATGTCTCTACGGTTTGTGAACTTTT
GATCTTTTATTATTAAAGCAAGTGATAAGTATTGTGTTAAATATTAGATTGATGTGGTCC
AGATTCCCGAACGGCCCTCGAGTGCCCAGTGCGTTGTGGTATGCGTTTTGTTTACAAGTC
TCCACCAGATATCAGTCCAAACCATCAGCAAGTTTCAACGACAGCGGATCTTCTCTGAGG
ATCTTTGTTTTCTTTGGCCAATTGTGAGTATGCTTCTTGCGTTCCATCAAATGTCCAAGC
TCAGTGGTCCATCGGTCCATTGGTCCAGTCCAACGCTCATTCATTTTCCAGTTAGGGTAT
GTTGTGGTGCCTGGTCCAGTATGCAGTGTCCTCGGCAGCCCGCGCCCGCGCCACGACCCT
GGTGATGTGTGATGAATGATGATACGTAATCCATTTGCAGGGTGCTTACCTGCCAGCTAA
TGCGGCTAGACAAATTCTCGACGATAAGTCGATACTCGGTGCGCGTTGGCGGTCCGTATT
CGTATCGCGAGCGGCCGCCGCCGGAGCGCTCGTAGTGCCGGTCGCCGCGCCGGTACCGGT
CGGCGCTGCGATCGATGCCCCTCGCCGGCTCCACCACCACCCTGCGTAAATCCAGCAAAC
TATTAGATCCGCCCGATCGATCGGTGAAAGAATCGGTCTTTCACTGATCGAAAATCTTCA
AATTGATCGAT
(2651 bp)

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