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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40006_c0_seq4
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_UPF0505_protein_C16orf62_isoform_X1_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0030904 C retromer complex
GO:0042147 P retrograde transport, endosome to Golgi
Transcript
Level		FPKM:7.16 TPM:5.66
ORF EntryO_BomoMG15595_5prime_partial:A_BomoMG_comp40006_c0_seq4
Sequence
(Nucleotide)
CTCATTATTTTTTATTTTATTATTTATGATTTTCATATAAGGTACAAATTCTTCGGAAAT
AAAATGTTGAAATTTAATCAAACTTATAATAACAATAGTCTAATCAGATTTCGTGTATTT
TGAATAGTAAACAGATTGTAGGAATGTTTAGATGTATATCATATCTTCATGTAGTCATTA
GGATAATCTGTTTCAGGTTTGAACACCTTGTTCTAACTTCTCGAGCAGCTGTCGACTTGC
GAGATCTTCAGAGGTGCGTAGCGCGGAAAGAATGTGCGAGTTTATTATTGGGATCTTGTA
TTTTCTTTGAAAGCATCCACAAGTTGGCCGCTAAAGTGAGCATGGAATGTTGTTCTAAAT
CGGCGCGTCTTATCACGCGCCAGAATAATTCCAACGTCAAATTGTACTGTTTCTTTGTCT
CTTTGTTGTCGCCGAGCGCTTTCAGTACCACGAGCAACTCCTGGCATATGTCCGTCGCAT
ACCCGTCTAAGACCGAAACGAATTCCTCGTCGCAACCATACAGCTTGTCGTTTGATAGAA
CGGAATCGATGTGATGTGCGTAATCCTCCTGCGCCATTTCGCTGAGCAGATCTAGAATGT
TCAAAAGCGTGTTGTAGTAGCGCGGGTCCGTTTTACGCCAGTGCACCCTCTCCATTGTCT
TGATCAGTCCGCTCAGTATGTACGCTTTGCAGTTACTGTCCACGTTGTCCGGCAAAACAA
GAAGTGTGGATAAGAAATCGCGCAATATTCCTTCAACTTTGACATTGGTTGATTTTTTTT
GTCCGTCTTCTAGAATGTACTCCGGAATATCTGGTATCAAGCCTATGAGGGATTTAAAAT
TTGCTTCCGCTTGTCCAATGCAGTTGTTGAGCAAGGCGACTTGTCCAGAGAGCAGGTACA
GCTGTGCCTTAGTGATGGTGCAGTGCAGAGAAGGGACCGTGATGTAGCAATAAGCCGCAC
ACGCCCTCTGCAGCCATTTGTTCCGTGCGTCGCCGGCACGTATCGCTAAACCATTTACCT
TCTGCACTAGAGCAACGAGTACAGCGTCGAGTTTAATGAAGGAGGATCTACATTCCACGT
AGAAGTTCAACTGCTGCTCGAAGTCGTCGTGGAACGTGCCCGCGTGGACGAACTTGTTTA
TGAGTTCGCTGCACACTTTTATTTCATCATCTACCGTTATAGCATTTATGGAATCGTGGA
GGGTGCAGCAGAGGCACATCAGTGAGGTTATAACAATATGGTCGTCGATGTGAAGAGAGT
TATACCGCGTAAAGAACGTTGACAACACCGTTTTCGCCATTAAGGTACGTGCGTTCGTCG
TCTGTACCAATTCTATGAGCGGCATAAACGCATCCATCAGAAAACATTCCTCGATGTCCG
GAACTGATCCGAGCATCCTTTTGATGACAATCTGTAAGTTGCCGGAAAATTCGTCAGCCG
ATTTCCCGCACTTGATCAGGTAACGTATTGTTCCACGCAGAATTATATTCACATGCTGGG
TCGATAAATTTGTACAAGCGAATTGTAGCCACGGTCCCAAAACTTGCAAAAAGTGCACAG
TAGACCTTATGTTGCTGGCTATCTTCCACCAAGTTTGAATCAGTGTCTCTGAATTGACTT
GTCGGCAGTTTTCCGACGCACATAAATGTTCGCCGAGCGAAGTCAACACGTCATGGACCA
GTACCATTTTATCGGCAGATTCCACAATCATATCTAGTATTTTTGTAGACCTTTTAATTA
TAATTTTCGAATCAAATGCAGACAGAATACCACACAGGAGCAATTCATTGTTTTGCATTT
TCTGACATTGTTGAAGCATTTGATCCAAAAGTGTTTCCTTGCAGTTGGTAGAATGCAAAG
TTCCAAAAAACAGCCAATCAACGGCCGGCATGTAAATGTTTAAATATTTATCTAAGGTAA
GTAATTGTCCTTCGTATTTCTTTTTCATGGCCACATGATAAACCTGTTGATACTCCTCAA
TAAATTCCTTCAAATTTTCATAAAAATAATCAGAGCACTCGTTTCCTAATAATTTAGACG
CCACCTTACAGAGGTATGCCCTTAAATAGATCGCAACTAAGGGATTTCCTATCCCTCTGA
TCATCGCAGTCAGTCTCACGATTGTCGGTTTTATTTCCTCTTTCGATGTAAACGAGTAGC
ATTTCAACAGAGCCATCTCCATGTAAAGGCGCGGCAGAAGCTCTCTAATCGATGCCATCT
TATACAACCAGTTCTGACAGGTTTCTCTCGCCGTTTCCGGCACTTCCTTCGGGTTGATAT
CCTGAACAGGCTTCACAAGCTTTTGCCCAAAACTTTTTTCACAGAGCCTATCGAAGACTA
AGTTACCGAATGTGTCCAGGATATCGGTGATGAGAATGAACTTGCTCGGATAAAAGTGCA
TGACATTAACATCTGACAGTAGCTTGGAACATTGGATCCCTATTTTAAAAGCTTTAACTC
TTTGCTCAGACTCCCATGCCTTCTTAATTTCATCATTCAACATATTTATTTTGGTAACAA
ATTCTTGTTGGCTCAAACCCATTGTTTTCCTCACTGAATCATCATCAAAATCATCCAATT
GCTCCAGTCTATTTTTAACTTTTTCGTTCAAATTTGAAACCTGTCTTATGAGGGTTTTCT
CACCACCAGGCAAAAAACTACTGACTATTGTTAGCTTCTCTCCAGTTGTGTATCTATTGA
GGACTATTGTACGTTTTGTATTCCATTCTTTTGCATAATTTACCCCTATACCCTCATCGT
CAGCATGAACAAGATCTTCATCTAAAGCCATCTGTTCAAACTTAAGCAGTGGATCTATTT
CTTCAAAGCCAGCACTCCATTTACTCAAGTCATCAATGAAGCCTTTGTTTGAGATTTTTT
TAAAAAGTACATGATTTGTCTTCAGAGGATGATGAGAGACTTCAAATTTAAGTGCTTTGC
AAATCATCCGTTTTTGGTTTTTTGATTTCCATTCAAAAGTTGGCA
(2985 bp)

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