SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39984_c0_seq13
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_calpain-A-like_isoform_X2_[Papilio_polytes]
Ontology
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007298 P border follicle cell migration
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.90 TPM:2.29
ORF EntryO_BomoMG15499_complete:A_BomoMG_comp39984_c0_seq13
Sequence
(Nucleotide)
GGAAGTTTCGATAATTCAGCATTCGACGCTCAAACGCGTTTAAGTGCGGACGTGTTACAG
CGAGAAATCGTTTTGTGAAAGTGCTCTGACGAAATGTTCAATTATTATCCGAAAAATTTC
AAGGCCAACGGCTGGGGTTGGCACAGAACCGCGAACGCGGCTGCGGCTGTCAAAGGGTTT
TTGAATAAGGAACGCGGCGAAGGGAGCTCCGAGCCGCTGATAGGCAACGGGAGCTTGTAT
CCCAAACTGCCAAGTGAAGATGATGCTTCGTTTAGTGGTGTCAAGTTGTATCCTGCTCTG
CCGGCTGAGGAATATGAGAGCGGAGCTGTTGAGGAGGTGGTGGAAGAGGCTTGTGCCGCA
GTGAACGTCCATGCTATGCTAGGCGAAACCCGCCCGTCATCATTCGGTCCGGCTACGTAT
CAGGACTTCAAAGACATAAGATCGCGGTGCCTAGCTGAAGGTAGACTCTTCGAAGACCCC
GAGTTTCCGGCCGTGGACCGCAGCCTCTACTACAAGGAGAGCCTGGACAGGCCCATCACT
TGGCTCAGACCTGGGGAAATCAGCGACAACCCTCAACTTTTCGTCGAAGGCTACAGTCGC
TTCGACGTCCAACAAGGAGAGTTGGGCGATTGTTGGCTGTTGGCTGCCGTTGCCAACTTG
ACACTTCATCGCAAGTTATTCTTCCAAGTTGTACCTGATGATCAGAGTTTCGATGAAGAT
TATGCGGGCGTCTTCCATTTCCGTTTCTGGCAGTACGGGCGCTGGGTGGACGTGGTCATC
GACGACCGTCTCCCAACGTACCGAGGGAAACTGGTGTTCCTCCACTCGGCCGAGGCGAAC
GAGTTCTGGAGTGCTCTACTCGAGAAGGCATATGCGAAACTCCACGGATCGTACGAAGCC
CTCAAGGGAGGCTCGACCTGCGAGGCCATGGAGGACTTCACCGGCGGCGTCACCGAAATG
TACGAGATGTCCGAACTGCCGCCAAACTTCTACACGATCCTGCTGAAGGCGTACGAGAGG
AACTCTCTTATGGGCTGCAGTATTGAGCCCGACCCCCACATCCTCGAGGCGGAGACTCCG
GCGGGGCTCATCCGGGGGCACGCGTACTCCGTGACCCGGGTCAAGTACGTGGACATCGAG
ACGCCGGGCCGCGCCGGCAAGATCCCGCTGCTCCGCCTGCGCAACCCCTGGGGGAACGAG
GCCGAGTGGAACGGACCTTGGAGCGACAAGTCTCCAGAGTGGCGCTACATCCCGGAGTCG
GAGAAGGAGGAGCTCGGCCTGACGTTCGACGACGACGGCGAGTTCTGGATGTCGTTCAAG
GACTTCGTCAACCACTTCTCGCGAGTGGAGATATGCAACTTGAACCCCGACTCTCTGGAC
CCCGAGGAGTGTCCCGAGGGCTGCACCAAGAAGTGGGAGATGTCGGTCTTCGAAGGCGAA
TGGGTTAGAGGCGTGACGGCCGGCGGCTGCAGGAACTTCCTGGAGACGTTCTGGCGGAAC
CCTCAGTACACCGTCACGTTGAGCGACCCCGACGAAGGAGACGACGAGAACAAATGTACC
ATAATCGTGGCGCTGATGCAGAAGAACCGTCGCTCGCAGCGCCACCAGGGCCTGGAGTGC
CTCACCATCGGGTTCGCGGTGTACCGCCTCCCGGACTACGGGCACGTGCCCAAGCCGCTC
GACGTCAACTTCTTCAAGTACAACGCGTCCGTCGGCAGGTCGCAGGCCTTCATCAACTTG
AGGGAGGTCAGCGCCAGATTCAAGTTCGAGCCCGGCTCGTACGTGATAGTGCCCTCGACC
TTCGACCCTGACGAGGAGGGAGAGTTCTTACTAAGAGTCTTCTCCGAAAAGGACAACAAT
ATGGCTGAGAATGACGAGGACATCGGTATGGGCGATGTTGACGACAGAGTGAAGGAGCTG
GCGCCGGACCCGGAGCCGGCCGACCCGGTCCGTGAGTTCTTCACGCGGCTCGCCGGCTCC
GACGGGGAGGTCGACTGGCAGGAACTCAAGGAGATCTTGGACTACGCCATGAGGGAAGAG
TTGCAAGGTCAGGGTTTCTCCAAGGACGTCTGCCGTAGCATGATCGCGATGCTTGACAAG
GACGGCTCCGGAGGACTTGGCTTCGAAGAGTTCAAGTCCCTGTGGATCGATCTGCGCAAC
TGGAGGGCCGTGTTCCGCCTGTACGACGTGGAGCGGCGGGGGGCCGTCCCCGCCAGCCAC
CTGCGTGACGCTCTGCACTCGGCCGGCTACACGGTCAACGCACACGTGCTCAACGTGCTG
GCGCACAGATACGGCACCACCGACGGGTACATACAGTTCGATGACTTCATAATGTGCGCC
GTGCGTCTCAAGACCATGATCGCAAACGGCGAGCCGTTGGAGAACCTCGAACGTGAACTG
CAGCAGGCGCCCTGAGACGGAGCCCGGAGCGCCCTCTTGTAATCACAAACACACGTTCAA
CTCTCGATCTTCGGGCGGAGACTACGCCACCTTCTCGCTCGAGGAGTGGCTGAATCGCAC
AGTATACTCGTAAGCGGAACCGAACCTCCTTAACATCGACCGGCCTGCATGCTGGATCCC
GTCTACACTACTACATCGTATTTAAAAAAAAAAAACTGTCACTGTCAGTTTTGAAAATTG
TAAACTTCAAATTTGACAGTTCGAAAAAAGAAAACGAAAAAATACACGTCCTTTCAATTT
TATTTGTGCAAAAAAATAAAATACAATTTCTATCCGAAGTATATTACGAAGATAGATAAT
CTCTGCCTTATATTTATAGAATATAATATGTATATTTTTAATATTTATAGTTATAAAAAA
AAAACAAAAATCTAAGTGTTCATAATTCGCTTGATGTATAACGGAAATTGATCTTTTGAG
ACGACGCCGCTTACCGTCGGGTGCGCTGTACGCTCGCCGCCACGCTCAATGTCACTCTGT
CATCAATTTTAATATAAACTCATAATACAGTAGGTCCACCCGCATCGGTACCGCCTACCC
ACTTCTGTATGTATAAAGAGTGGGATATTCACGATAAAACAGCATTGAGACTACGACCTC
ATGTCTCAAGCTCTACGTCACGTTGTGACGTCCATCTGTTCCGGCTTTGCATCAGATGAG
CTGGTATTGCAAGAACCAAACCTTCAAGGCTTGCGGAGAGTGCTGTCATAAGTAATCATC
AGCGGTCTATGAGTTTCTCGCCGGATCTTCTC
(3212 bp)

- SilkBase 1999-2023 -