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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39983_c0_seq3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_protein_virilizer_isoform_X5_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007530 P sex determination
GO:0007539 P primary sex determination, soma
GO:0007549 P dosage compensation
GO:0008380 P RNA splicing
GO:0016021 C integral component of membrane
GO:0048024 P regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:4.57 TPM:3.61
ORF EntryO_BomoMG15456_complete:A_BomoMG_comp39983_c0_seq3
Sequence
(Nucleotide)
AGAATCTATGCTTCTAATTCTAAAATATTAGTAAATTCATGTGAATACAAATTACTAATA
TTAAATGAAACAATACAATGACGAACTCTGAGAAACCCGATCTATTATTCTTTGATACGT
TCTCACACGACACAAGCGAGGAATTGAATCTGGATTTAGTACAGTTTCCAAAGTCTGTCT
ATGTAAGAGAAATACGTGTTATTCCATTGGGTGCCCGAGTTGAAGGAGACTTTCCCGGTC
GAGTTCGGTTAGGCGCCACAAACCCTACGAAGTTTCATATCGACTTTTTCGTGAATGATC
TGAGTAAGCCTGGAGCTTCCACTTTCGAAGCTTTGGGTAGTTTGGACTACTGTCAAAATG
GACAGATTCATATGGAGTGTGGAGCTGATGGGGACCATCCTAGAATCCCTACTGATGGCC
TTGTATTAAGAGGATGTTACACTACCATCACTCTTGCTGTTTACGGGACGCTCACACAGA
TTTTACCAGAAACACCAGTTGGTATCAATCCCCCTCCCACTATTCAAAGACCCGCAGTCA
ACCGAGATGCGCCACCAGCAAATGTGACACAACCACCTGACTGGAATCCAGAGCCAACCA
ATCCAATACCATCATACACTGGTAATGTCGCCAGCACCAACCCCGATGTCTATACTCCTA
ATACGTATCCAGAAAATTATGAAAATCCAATTTATCGAAATGAATATTATGAAAACGAGC
CTCCGAAAGATCCTAGGACTTATCATGTGGAAGGTGATTGGGAAAAGAGTAGAGATATCA
ACTGTGAAGGTGAAGGCGATAGATTGAGACGTAGTTCAAGATCTATAGAGCGCGATAGGG
ATAGGCAAGGACACGGTCGACGAAGGTCAATGGACCGGCGCAGTCGAGACTCTTCAAGGC
ACAGAGATGATAGAATGGAACGACATCGGTCGAGAACTAGAAGTCGGGAACGAGAGTATA
TCGTGCAGGGCGAATATCGCACTCGCAGTCGCTCCAGATCACGCAGCCCAGACAGAGTGC
GGCCTCACTCCACTGAGCGCGACTGGGACAGGGCCTCGTATAAGAAGGATGAATACAGGC
GCCACCGCGAACCGTCGTACGAGAGGACGTCTTATGATAAAGAAGCCGGTTCTTACGAAC
GTCGATCTCCATACGACAAGCGAGCACCGTCATACGAGAGAAAGATAGGTTATGATAAAA
GATCATCGCCGTACAAGCGTGGCGCTTCCTATGAAAGACGAGCACCGTCTTACGAAAAGC
AGCCACCTTACGAACGTAAACGATTGTCTCCTTATGGTCGAATTAGAAGTTCTAGCTACG
GAAGTAGATCGCCAAGTCGCGATGACCCAAGGAAACGGCCTAGGACTCCACCAGGAGAAA
GTCGTCGACCACTCTCACCACGAGATGGAGAAGCAACTAGTCCTATACATTCCGTCAGAT
CTGAAGACGATTATGAGAGAAGTGGAAAGCAAATACCCAGAGTAGACTTCTACCATCAGA
GCTACCGTCACAAGCCTCCTATAAGGAGTCCTTCTCAAGAACACGCTGCTCCTTTCGTTG
AGACTCATTCAAGCCTTGTCACTGTCCCGATAGTCGATAATCCTCCAAAACCAGAAACCC
CGAGCGGCAACGCTGACGAAGTCAAGTCTATCGATGCTGAACAATTTGAACCGATTCTGT
CTGACGAGGATATTTGTGACGACCTTGAAAGTACCTCGTACATGGAGGTGGATTACGACG
TAAACGAATATGTCGGTGTCGATGACATAATAAAATATTTCAATCCGTTCAAAGCAGAGT
GGTGCAAATATGAATATATTAACAAAATACAGTATCTAGGGCCCAAAGGTGAAGATGTAA
AAGACGTGCTATCAGCCAAATTCGATGACTTGTGTGATGTCAGTCCTGACCTCTTCAAAG
TTTTAGAAATATCAAAGAAAACTGACCAGAAATATTTTACGGATTCGTTCAAAGACATTG
ATAATACGATGAGAGAGGAGTGGGTGCACCAGTGCGAACAGATGTACGTCGCAATGACAA
ACCTCTGCAAAAGTACCGATATTGTAGTTAGAATCTTCCAAGATCCAACTCCTTCTGACG
AATTCGGTGAAATTAACAAAACACTGATTGCTTTTTGTAAGATTGGTCTGAATTTCGGTT
ACGCCCTGTCTCAACAGCAGCCCACTTACAAGATAAGGCACATGAAATGCGGCATCCGCC
TGGCCGAAGCCCTGGTGGCTCACAGACATAACGAGCTCGTAACGAGAGAGCTGCTGGCAG
CGGACATAGACCTGCCCATGTTGCTGCTGCAGTTGTACGCTGAGGAGTACATGGCGCTGA
GTATACGACTCATGGTCCTCAAGGCGCTAGACGCGTGCTTGTCATCAAAAATCTCAATAG
ATAATTTTATGAATGAAAAGCTATTCCCCAAATTCGACAAGAATGAAATGGAGAGAAAAC
CCAAAAATGGGTACCGAGCTCTCATATCCATGATGCAAGCCGATCCACTAGCCAGACTAA
AGTTTTCAATAAGCGCCCTCATTAAAAAGCTGAATATATATGAAGTGCTGGGAAAACTTC
ACGATTTGGTAGCAGATCTCAACAAGAAGCCGGATGCAGAAACCAGCGAAGCTGACACCG
AGTTTATAGTAAACTGTTTTGAAATAGTCATTGACATGTACCGATCTCAGTGCTTCCATC
TGTCACAGCCGAAGCGGTTCCTGCCCGTGTCTGCTCAGTTCGAGATCAACAAGGAGTGTA
GCAACGACACCTTGCTCGAGTTCTTCAGCATCCACAGCGTTCTGGAAGTCTGTCTGTGTC
TCTTGACTGGCCCTAAAACTTGCAACAACCTGGTGGTCGCCAGCCCCGTGCACGACTTGA
TTTACGAGTTGGTCAATTCAGTGAGCGGTTTGAGCTTCTTGTACAGGAACATGGAGCTGA
GCGAGCTTCTCTTCAAGACCCTAATGCAACCTTACAGCCAACAGACTGTGGAAGAGTTTC
TGTATCCTCACGACTTGAGCAATTATTCCGATTTGCAAATTCTCGGGCTGGAGATGGCTT
ATAAACTGAGAGCTTTGTATTATTTGCAATCCATTTGCGACTTGCAAGCTGGTCAAGGCG
ACGAAAATGAACTGATCGATCGCCTGCAGTCCTTGTACTGCCTCAGCTTCGGCTGCATCG
GTAGGACTGCGGTGTCCGACGTCGTCGTGATGGGCGACCATGCGGATTGCCTGATGGAAG
TCTTCGAAAATGACTCAAGAAAAAATAAAAATGATTCACCTTCTAAACAAAAGTCCCCAG
CAAAAGGATATGCCATAGAATTGATCGTATCGGCAGTGCGGTTTTCAGCCAATGTAACGT
TTTTAAAGAAATATGGACAACGACTCATTAACGTCTCGAAAGATCACGACAGGTTTGAGC
CGAGCGTCTCCAGTGTTCTTCAAGAAGTCATACCATATCTGAAACCAGTTGAAAATATGA
GCCTCTTGAACGGGGACGACCTGGCAGAGTGCGTGGAGATCCTAAAGGCCAACTCGGAGC
ATTCGGCCGACTTGCCCGGTGAACTCACAACTTGTCTTCGTGTCCTGAGGCACTTCTGTG
TCTCCGACCGCGACACCAACGTCGCCATTGCAAACGAGGCGGCCGCGCAGGAGTACGTCG
AGCTCAAGTACAAGTACAACGTGCTGCAGCTGTACTCCCTGGACGGCGTGGCGCACCTGG
GCGGCGTGCTGAGCAGGCTGTCCACGCGCTTCGAGCAGCCGAGCATGCACACCGCATTCT
TCGCCTCAGTCAAAGGATTACAGCTCGCTCAAATATTGGTTCCATGCTTGAGGTTGTTGG
ACGAGATGTTGGCGAGAGTCGTTCGTTGCCGGGGACCGCGATTCAGAGACCTGACGGCGG
CTCCTGTGCTGTTGAAGACGTACGGTATCGCCAAGTCCTTCCCGGTCGGCTGCGTCGGCT
ACAGGACGGCGGCCAAGGCTGCAGAAGCCGCCGTCAAAGCGTTGCTGACCTACGCCCAGC
CGATAGCTGACGATGCGAATGACGGGGACTCCATCCGGCGTGGTCCGTGGACGTCTCTGT
GCTCTGAAGTCATCCAGTACACCATGACCGCCCCCTACACGTTCGTACCGGGATTGTTGG
TGTTTTCCGAGTTGCTTCCGCTACCGTTACCGATGCAGGCGAAGACGCCGCCGACTCCGC
GGGAGCTGGAGGACGCTTGCAACGAGAGAAGGTTGTGGTCGGCACATTTGCACGCGCTGT
CGAACGATCTCACCGACATGATCCAGATCATATGCATGTCCACGTATCGGCCGGTCGTCC
ACATGCTGAGGCGCGTGTGCGTGCAGATAGCCGACCTAGCTCCGAACACTGCCGCCACGG
TCGCCCACGCCGCAGTGGGCGCCGTCGCCAGGGAAGTGAAGCCGGGAGAACCCGCCACCG
CGAGCTCAGCCAGAGTTCTAGGATTTTTGACATGTCTTGTGTCACACGCGCCTCTGAAGT
GTGCCGTCCTCCACGCCCTAAACACCGGCGGACCCAAAGCGACAGAGATTCAGTCAGCTC
TGTGCGGAGTGCTCAGTCTGCCGAACGCTGCGGGCGACCATTCCACCGCACAAGAGTTCG
CCGCGCACATCCTCGCCGCTCTCTGCGACGTGGACATCACGCTCACCCCGGTCTCCTCCC
TCCCGGATAATTTACTCGCAAATTCGTTACCAAACAAGGAAGCGCTGGCAGCTTTCCTCG
ACGCCTCGGCAGATTGTCTGGAGTCCAGCACAAAAACTTGCTCCGTGGCGCAGTCGATAC
TACGAGCGTATTTCGTACTGACTGACCACGAATACGGTTTTCAACAGTTCAGGAAATTTG
TGACGAAAAAACGTGAAGCTCTGGGGACGTTTTTCAAATGGGCCGTGGACGGACCCGGTG
AGGATAGGGCGGAATGCTTGAGCCTATACTTAGATCTCATCAGGATATTGAAAGGAGAGG
AAGGCGAGGGCGGCCCTGTCGTCAGGAAGTCCGTGTTGACTGTAGCCGAAATGGCGGACA
TGCTGGGGTACTCTGTGGGAGCTGACGATCATCCGGTTATGAGTTTGGAGAAGATTTTGA
AGGATCGCAACGCAGAGGAAGATGCCACAGCAGTCAAATTCCTTATTGGCCACCTTCAGA
AGCTAACCGAGCGCGGCTCCCCACCCCCCGAGGGTCCGGAGGCCGTGCCCGCGGCGCCCG
ACAGCCTGGTGGCCCAGTTCGCCACGCGCACCGTGCACAGCCCGGGGGAGCCCGCCGACG
AGAGACTCACCACCGGCTACTGGTTGAACATCCCCTCGGCCAGCGGAGAGGACTATGTTC
ACGATCATGAATTAGTACCGTGCGACATCATGGAAGTGGCGAACAGCTACTTGTCGGTGG
GCGGCGCGTCGTGCGGGGGGGAGGCGGTCGCCAGCGCCGTGCGGAGGCTGGCCGGCTGCC
TCGACACCAGGACCGAGCCCCGCTCCTGCGACGACAAGAGGCCCGCAGTGGAACGGGGAG
TGCGCGTGTCGCGGGGGCGGGGGGAGGCGCCGGACGCGTTCCGCTGCCGCCCCCCCAACA
CCTCCCGCCCCCCCAGCCTGCACGTGGACGACTTCACCGCGCTGCACCACACCTACACCA
ACCTCAGCAGGGGCGCGCGGCGTGGTGCAGACCGCGGGCGCTTCGCGTCGGCGGCGCCGG
TGCACGCGCATTACCGACACACGTGAGTGCCGGCCCCAGCCGCAGGAGCCAACGACAACG
(5760 bp)

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