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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39938_c0_seq3
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:3.60 TPM:2.84
ORF EntryO_BomoMG15297_complete:A_BomoMG_comp39938_c0_seq3
Sequence
(Nucleotide)
TATTATTATTATTATTATTATATATGCATATATAAATCGGAGAAAAGTGATCTCTAAAGT
GACGTCACAATATTAATTGAATTGTGATCTTGTTAATTAGTTAGCCGTGTCGCATTTCGT
ATTGCCCGTATTTATTGTAGTTAATATTCTTTTATTACGTTGTAAATATCAACAATATTT
ATATGTTACATGTGACATCGCGTTATACTATAATACTAGTCATCGATCTAGTGTGTGTTT
ATTGTAAAATCATAATTTAATTGTTACTAAAAGAAATAATTAACGAAAACTTCGGTCGAG
TGCACTGAAGGCAAGAAGGGAATTCGTGTTTGAGAGCAAGTTACGTAACTGTCAAGATGC
AGACTCAATTAGGATCAGGCAATGATCTGCAGAGGAGCTACAGGATCCAGGACTTCGCCA
CGCCTGGCGTCATCATGAGGGAGCGGAGCTTCGTACGTCCTCAGTCGCATCACAACATGC
ATCATCACCAGTTTTCAAATAATGGGAAACGACGGAGTATGATCCTCACCAACGCAAAGG
GAAAACCGACTCTAGAAATCTACAGACCACCAGGTGTCCGCACAGACGGCGTGGTGTCAA
CGAACGCTGGTGCCGCCTGTACGACCACCACGGCGGCCGGCAGTGGTGCTGCGGCCACCA
ACAAGCTGAATGTGCACGCAAAGGAGTTCACAATGGCGAAACCGATTGACCTACACAACA
GAGGGGCATTGGGCGTGGGGTACGCTAGTGTGGGACTGCAGCACTCCAGGTCGGCGGTGC
TGCACGCGCAGGTGCCGCCCCACTACCGACCCGTGATGCCGCCTCACGCGCTCCTCAATA
GCGCCTCCAGCGGGAACGTGCCACATGCACAGGGGCCACGCGTGCACTTCAAGCTGCAAC
CACAGACTATCATTCCTGAGAAGAAGAAATCCCCTCCGTCGTCGCTGACGAATGGTAACG
GGAAGAGCATCCGTCCACAATCGTTTACACCAGGATTGAAAAGGTCAAAGTCCTTAACGT
CAGCGGATGCACTCGCAAGTGGCATGGCGGCCCTGGGTCTGGCAGCCGACGCCGGCGACC
TTGGTACATTCCCGCCGGAGATTCAAGAGTGTATTGATAAAGCCCTGGAAGATCCGAATG
CTGTGTGCGCCCGTACCCTGATGGACGCTGTGGGGCACCTGGTCTCGCGCGCAGTGGAGT
CGCCGCGGTACGCGCTGCCGGCCGCCCGCCGCTGCATCGCCGTGGTTGAGCGCGAGCAGA
CGGAAACCTTCCTCGAGTCGCTGCTTAACACGTGCCAGCAATGGTACCACGATAGGGACA
AGCTGTTGGGCGCGATGATCGGCGGTGGTCGACCTCGGTTGATGGCGTTCCTGTCGTTCT
TGCTGGAGATGTACTGCCAGCTGCGGCGCCGGGCCATCCAGCGACGGGGAGCCAGCGCCC
AGCCCGGGCACGTGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCAGGCAGC
CGGTGCCTTCTGCTAGTGATACTGAGAATCTGTTCTTCGTACTGACGTACATAGGCCGAG
ACTTGGAAACTCAGCTACCTGGAGATTTGGAGCGATTACTTACAGCCGTCCGTGACGCTT
TCCTCAATACTGCCGCGGCTCCTTCCATCAGGCGTACTTTACTGCAGCTTATAGAGCTTC
ACGCATCCCGGTGGCAGTTACCAGGATGCGCAGTTCTTTATTACTATCCTTCGTCCAAAT
AGCACGCTGTGCAAGGTGGTAGGTTGCAATGATATTGTCATCCATATAAACCTAGAATCG
GATGTTCGTTAATATCTCACATTATGGATATTATTGCAGGGCATATCATTTTAAATCATC
TTTGATGATTGGCCTTATTTTAGAGCTAAATAAATTAATATATTTAGACGGATGAGGGTT
TTATCGTGAGTATCTTGATGTGATGGAAGTCGCGAACTGAATTTAATCTTGTGGGATTTA
TAGATTCTTTGTTATTCTCACTAAGAAAGGATCGTGTTTCAAAAAGCAAAGGTTACGAGC
ATTTCTTAATCGAGTGTTCGCTCGTGTTTCTTTCTTAGTACTGTTGCGTTAGTTAATGTA
CAGGAGGTATGGAATTGTCTTCTGTCGTAGGCATAAAGCTGCCATAAGCTCATATTATTG
TGCCTTTAAAATAATTTAATGGATATTTAACATTTTATCGTCACTTTCATGCAACAAATT
TTAATAAAAATATTGAAAGTGTGGTAAAGTGTAGTATTTATAAGATTTTGTTATTAGCTT
AAGGTGGATTCGAAAAAAAAATCTTTATGCCTGGAAAGTATTAAAAAGGTACATTGTAGA
TTAATTTGTTTGGACAAATTGACAGTGTACACTACTGTACGATTCTCGCATAGTACTTTG
TGCATTGTATCCTTGTCGTATTCTAATTTAGGTATACATTGCCATCTATTAATAGCACTA
AATATCTTGCTTGTTGTATCGTTTGCATAGGATTCAATTATGTTTAGTAATTAAGTTACA
ATGCACTTATTCCCAACATAATTTAGTACTTCATTGCACTCAGGTATTTAATTTATGTTT
CAAAAATGTTTTAGGATTTGTATCAAAATTAAAAAAATAAACGTTTGACTGAATTGTTTG
TGGAAGTGAAACTATCTCTGTTTTATGCTTGTGATATTATAAATTTAAGGTTTCTGGTAT
ATTTTTTCTGTCCTAACCAAAGACTGTAATGAATGGGATATTTCGTTTTTATTTTTTATT
AACAAAAAAGAAAACTTGTTGAAGCTGGACCAAATTTCTTGTTTCGAGCTCATTATCTGA
GGTTGTGTACGAGTGAGCGAGGAGACGTTCATTAACTTAACCTTAGATAGCTCTTATCAA
TATATAATTATCAAACTAATTTAAATGAATAATATGGGAAATATATTATTTAAAAAGACC
TTTGACTTTTCATAATAATGCATTCTTAGCGATTTAAGTTAAAAATACGTTTGTAGAAAA
AAGTTGAAATTAAAAAAATGATGCTAACAAAAGAGATATTGGTGTATTGTATCTTTATTC
ATTAATCTTATTACGGGCAATAACGTTGTTTTTTGTTACCGCTGTAGTTTTTGTATGAAT
AAAGCACTTAAAGGATTATAACAATAAAATATTAGAAAATTAAAAAAAAA
(3170 bp)

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