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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39938_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:6.96 TPM:5.50
ORF EntryO_BomoMG15293_complete:A_BomoMG_comp39938_c0_seq1
Sequence
(Nucleotide)
GTTTTTGTTATCACTTTGTTGTCGAGAGTGGCGCGGCTCTGACGCGATTACGCCCGCGCA
ATCGAAGCGGGCCGCAGAACGCCAGTCCGCGCACACGCCGGGAGACGCGCGGAGTTCTCG
CGACCGCGACCAAACCAACACGAACAAACAATCGAACGCCTTCGAACGAACCTCAAAACT
ACCTCTCGCATCGCTGCCTGCTAATCTCTAGGCAAGAGCATTGACCACCGACCGACGCCT
GATCACAAGCTATATCTGCCCTCTGGGAATCCTCAATCGAGGCTGCTTGCCGGATATACG
GGCTATTTATAAAATTCCGCCGTCGAGAGAGAAATGAGACGTAATTTGTTGGTGGTTTTG
CCAAGTTTGCACTGAGATTTGCAGCTTGATGATAGTGATAAACGCTGTAGCTAAAGTGTA
TATAAGGATTTATTTTAGAAGTGAAAGAGAGGTGCTATTTAGCGATCTAGTGAATTCTAG
AAGATAAACTAATTTATTGAAAATGGTGCGAGGACGTTATTCTACTTCTGATGTAGGGGC
ATTGGGCGTGGGGTACGCTAGTGTGGGACTGCAGCACTCCAGGTCGGCGGTGCTGCACGC
GCAGGTGCCGCCCCACTACCGACCCGTGATGCCGCCTCACGCGCTCCTCAATAGCGCCTC
CAGCGGGAACGTGCCACATGCACAGGGGCCACGCGTGCACTTCAAGCTGCAACCACAGAC
TATCATTCCTGAGAAGAAGAAATCCCCTCCGTCGTCGCTGACGAATGGTAACGGGAAGAG
CATCCGTCCACAATCGTTTACACCAGGATTGAAAAGGTCAAAGTCCTTAACGTCAGCGGA
TGCACTCGCAAGTGGCATGGCGGCCCTGGGTCTGGCAGCCGACGCCGGCGACCTTGGTAC
ATTCCCGCCGGAGATTCAAGAGTGTATTGATAAAGCCCTGGAAGATCCGAATGCTGTGTG
CGCCCGTACCCTGATGGACGCTGTGGGGCACCTGGTCTCGCGCGCAGTGGAGTCGCCGCG
GTACGCGCTGCCGGCCGCCCGCCGCTGCATCGCCGTGGTTGAGCGCGAGCAGACGGAAAC
CTTCCTCGAGTCGCTGCTTAACACGTGCCAGCAATGGTACCACGATAGGGACAAGCTGTT
GGGCGCGATGATCGGCGGTGGTCGACCTCGGTTGATGGCGTTCCTGTCGTTCTTGCTGGA
GATGTACTGCCAGCTGCGGCGCCGGGCCATCCAGCGACGGGGAGCCAGCGCCCAGCCCGG
GCACGTGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCAGGCAGCCGGTGCC
TTCTGCTAGTGATACTGAGAATCTGTTCTTCGTACTGACGTACATAGGCCGAGACTTGGA
AACTCAGCTACCTGGAGATTTGGAGCGATTACTTACAGCCGTCCGTGACGCTTTCCTCAA
TACTGCCGCGGCTCCTTCCATCAGGCGTACTTTACTGCAGCTTATAGAGCTTCACGCATC
CCGGTGGCAGTTACCAGGATGCGCAGTTCTTTATTACTATCCTTCGTCCAAATAGCACGC
TGTGCAAGGTGGTAGGTTGCAATGATATTGTCATCCATATAAACCTAGAATCGGATGTTC
GTTAATATCTCACATTATGGATATTATTGCAGGGCATATCATTTTAAATCATCTTTGATG
ATTGGCCTTATTTTAGAGCTAAATAAATTAATATATTTAGACGGATGAGGGTTTTATCGT
GAGTATCTTGATGTGATGGAAGTCGCGAACTGAATTTAATCTTGTGGGATTTATAGATTC
TTTGTTATTCTCACTAAGAAAGGATCGTGTTTCAAAAAGCAAAGGTTACGAGCATTTCTT
AATCGAGTGTTCGCTCGTGTTTCTTTCTTAGTACTGTTGCGTTAGTTAATGTACAGGAGG
TATGGAATTGTCTTCTGTCGTAGGCATAAAGCTGCCATAAGCTCATATTATTGTGCCTTT
AAAATAATTTAATGGATATTTAACATTTTATCGTCACTTTCATGCAACAAATTTTAATAA
AAATATTGAAAGTGTGGTAAAGTGTAGTATTTATAAGATTTTGTTATTAGCTTAAGGTGG
ATTCGAAAAAAAAATCTTTATGCCTGGAAAGTATTAAAAAGGTACATTGTAGATTAATTT
GTTTGGACAAATTGACAGTGTACACTACTGTACGATTCTCGCATAGTACTTTGTGCATTG
TATCCTTGTCGTATTCTAATTTAGGTATACATTGCCATCTATTAATAGCACTAAATATCT
TGCTTGTTGTATCGTTTGCATAGGATTCAATTATGTTTAGTAATTAAGTTACAATGCACT
TATTCCCAACATAATTTAGTACTTCATTGCACTCAGGTATTTAATTTATGTTTCAAAAAT
GTTTTAGGATTTGTATCAAAATTAAAAAAATAAACGTTTGACTGAATTGTTTGTGGAAGT
GAAACTATCTCTGTTTTATGCTTGTGATATTATAAATTTAAGGTTTCTGGTATATTTTTT
CTGTCCTAACCAAAGACTGTAATGAATGGGATATTTCGTTTTTATTTTTTATTAACAAAA
AAGAAAACTTGTTGAAGCTGGACCAAATTTCTTGTTTCGAGCTCATTATCTGAGGTTGTG
TACGAGTGAGCGAGGAGACGTTCATTAACTTAACCTTAGATAGCTCTTATCAATATATAA
TTATCAAACTAATTTAAATGAATAATATGGGAAATATATTATTTAAAAAGACCTTTGACT
TTTCATAATAATGCATTCTTAGCGATTTAAGTTAAAAATACGTTTGTAGAAAAAAGTTGA
AATTAAAAAAATGATGCTAACAAAAGAGATATTGGTGTATTGTATCTTTATTCATTAATC
TTATTACGGGCAATAACGTTGTTTTTTGTTACCGCTGTAGTTTTTGTATGAATAAAGCAC
TTAAAGGATTATAACAATAAAATATTAGAAAATTAAAAAAAAA
(2983 bp)

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