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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39919_c0_seq1
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		PREDICTED:_calsyntenin-1_[Papilio_xuthus]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:26.09 TPM:20.61
ORF EntryO_BomoMG15228_complete:A_BomoMG_comp39919_c0_seq1
Sequence
(Nucleotide)
CCGCCATTTGCGAAGGGTCGATCGCTGCTGAGCAGCGCGGGTGTCTTTGATTTGATTATG
TCGTGTGTTTAAATTTTTATTTTTCGAGTAAACTGTGAACTCAGTGCTGGATAATAATCA
TTTAAAATGATTGTGAGGTTCTTGAGCGTTTTGTGCGTCGGAGTTTTCCTGACGGCGGTG
TACGGCGCCGAGGGAAACAACAACGAAGAAATCCCATATCTGGAGTTGGACGAGCCCGAT
GAGGGTTATCATGGGCTGATCAAGGAGAACGAGACCCTGGTCGAAGTGACTCCTCCGATC
CGTGCCCGGGGACCGCTCTGTTCCTTCCTGATACTAAACAACATACATCATGGAGAGGCC
CCTTTTGAGATAATGGTGATAGACGAAAACGAAGCCCGCCTCCGTGTCCGATACCCGCTG
AACTGCGAGAAACGACGAAACTACAAATTCGATATTGCCGCAGTTGGTTGCGACGGCTCC
TATTCCAACACTGTCCCCGTTCACATAACGGTGACAGACGTGAACGAATACGCTCCAGTC
TTCAGTCAATCCGCGTACGTGAAGACCGTCGACGAGGGACGCATTTACGATGAGATCCTT
CGCGTCGAAGCCACTGATAAGGATTGCACTCCGCGATATGGTGACGTGTGCAAGTACGAG
ATCCTTACGGACAGGAGCCAACCGTTTACTATCAACGTTGAAGGTGTGATCAGGAACACT
GAGCCACTTGACTACGAGAAGTCTCACAACCACATCCTGTCGGTTGTCGCCTACGATTGC
GGTATGATGCAGTCGACGCCTGTTATGGTCACAATCAAAGTTAACAAGCCCTGCAGAGCG
GGATGGAAAGGAGTGGCGGAACGTGTAGATTACGCGCCGGGAACAGGTCCACTGGCCTTA
TTCCCCGCCGCACGTCTGGAGACCTGTTCTTCAGACGAGCGTTGCCCTGGAGTCACCAGG
ATCCAAGCTGCGGTCTCCTTGCAGGCCTCGCGCGTCGGCAGCGGCTGCGACAGGGATACT
TATTCGCTGCATTCTCAGCGTACCATATGCGGACTCGACCCGAAGACAATTGACCTGCTA
CCGAGTCCTGGAGCCGGTAATGAATGGGCGAAATCATTGAAGCCCGACTCAGGTCGTGAC
GGCGAGCAGATGTTCGAATTCGACGGCGAAACAACATCGGCCATAGTTCCAGAGTCGGTG
TTGCCTCACTCGCTGACCAGCAGCTTCTCAATCTCGACGTGGATGCGTCACGCCCCTCCC
GCTGACGGCGACAAGCACAGAAAGGAACACGTTCTGTGCCTTGCCGACGACCACAAAATG
AATCGCCACCACTACGCTTTGTTCGTCCGTAACTGCCGTTTGATCCTGCTCTTGCGCCGG
GACTTCGGCGAGGGAGACCTCAACATATTCCGTCCTGCCGAGTGGAGGTGGAAGATACCC
GAGGTTTGCGACAACGAATGGCATCACTACGCTCTGAACATCCGCTTCCCCAACGTGGAC
TTGTTTATTGACGGCGAACCTTACCGCTCGCTCGACGGTAAAGGGCCCGAAGTTATTGAC
GACTGGCCCCTGCACCCCGCGCACGGTGTCAACACCACCCTCGTCGTCGGCGCTTGTTGG
CAAGGCACCGAGAAGGATATGAAGCACCACCTTCGCGGCTGGCTGGCGGGGCTGGGCGTG
CTGCGTGGCGCCGCACAGCCCTCACACGCGCTCTCCTGTCTGGCTCGCTGCCGGGAGGGA
CTCAGTCTGGCACCGGACCTATATCTGAAGTCGGTGTCAGTGGAGGGCGACGGAGTGGCG
GACGTGGAGACATTGCTGCGCCGTGTCGCGTATGGAGACGCGCGGGCCTTCCCCACTCCG
GGCAGGAGGAATGTGCACGTGGCCACCACCATCACCTGCGACAACGGGCGCATCATCAAG
GCCCGCCCGGCGGAGTCTTACATCATGGTGCTGGCGCCGCAGACGCCCAGCATCCTCCTG
AACGGCAGTGCGGACGTGGCGCGCGACTACGCACACTTCCGCGCAGGACTCACCGTGTTC
CCGGACCTCGGCGTCTCCGTCCGAGCTGCTCCCGCTCATCCACTGGCCGATGAGAATCAG
AAGCTGGACTCGTGCGTGGTGTCGGTGTACCCGGCTCTGAACCCGGACCACGAGGCTTTG
TCGCTGCGCGCGGCCGCAGACCTGCCGTTGCGGTACGACATCCGCGCGGCCGTCACTCGG
GACGGCGTCATCCTCACCGGCGCCGACACCGTCCACAACTACCAGAAGGTGCTTCGCGAA
ATCGAGTACAGCAACAAGAAGCCGGCCTACTACCTGAACCGCGTGTTCAAGCTGACCTGC
TCAGAGCTCAACGGTCGATTCACGAGCAACGAATATGTACAAACCTTAACTGTGGTCCAC
CCTCATATGTCGGCCGCTAACGAGGTGGCCTCTCGGGAGCTACCCAGCGGCATCGCGGAC
AAGGCTGACGTCGCCAGAGAATCAGTGCCGGACCGCGGCCACGCCCACGGGCACGCCGTG
GCGCCGCGCGTGTACGCCGCGCACGCACAGCGCGACGCGCACGCAGCCGACGTGCCCGCG
CCCCGCCTCATCGACCTGCGCCCCGAGCAGAGCGCCAACCACGTGGCTCTGCTGATCGGC
GTGGTGGCCGTGGGAGTGGTGGTGCTGGCGGCAGGAGTGGGCGTGGCGCGCACCCGACGC
TCCCCCCGCGCGCCCGCCGCGCCCCGCGCTCGACACGTCGACTCCGAGATGGCGTGGGAC
GACTCCGCCCTCACCATCACCGTCAACCCCATGGAAGAGAGCGTCCCATCCTGCGGCACG
CACGTGAACGCGGCGGACAGCTCGGACGGCGAGTCCTGCTCCGACTCGGACTCCGAGCAT
CACGACTCCTCCGACGAAGACGACGAAGTGATGCCCAACAAACAGCACAAATACAGAAAC
ATCAGCCAGCTGGAGTGGGACAACAGCACGATGTAACGCGCCCTTGGCTGGACGCCGCGG
CCGTACTTAACGCACCCCTATAAACTAAAGTCTCCCTTCACTGGCACCCGTGTGCACCGT
CCTTCTAAATTCACGACTCGTTCCGATTTACGCGCTTTTAGAGCTGGTTTACACGAGCAT
CTCGAACACGAGTGGTTTTTTTTTTGCCTACCTACCAGTGGCCTTCAGGGGACATTCTGG
TTTTACTTTGATTTGTGGCTTCACGGAGCTCAATCTCAGAGAATTTTGCGAACATCTGCC
CTAGTAAAGGGCAGTGATTCGCTGAATCTACTACCTGATCGGATTCGCGAGCCACTGAGA
AAATCCGGCGAGAAGCTCAGTGGGTAACTAGTGGCTAGATTATGCTCTTCTAATTCGTAG
GCTCATTGCCTTATTATTGACAAAACAACTCGTGAAAAATAAGGTTGCTCGTTGCTCGAT
AAATCTTATTCGTGTGAACCAGCCCTTAATGTAACGTTTCAATATGGCGGACTAAAAACT
TTTTTATATTATTCGATACGATTTGTCGTCTCCGATAATAAGACAAAATAACTGTATAAT
ATTTCATTGAATACATAAAATATGACGATGAACTAGATGGCGTAACTGAAAATTTCAATC
GAGTATCTAAATGTTTAAAGTTTTACGAACATCAACTGAATACATTTTCCATCCAGTCTT
GTTGTCATAAATTATTAGGACATACGATTTTTATGTCGCCATATTAAAACGTGATAGAAT
TCAATCAAAGCGATTCATAGTTACGGAATTGATTTGAAATAATATGTATCCGTATAATTA
GTGTAATAAACAAAGCTTTTGCACAGACACGCGTGTACAAGACTTTGTATGTTAGGCTGT
GGTATGTGCACGAATTAGATGTTTAAGCACAAATAAAATTCCTAAAAAAAACTAATTACT
TTGTCACATAAAAAAAAACTTAAGCCATGTTTTTTTGTTTAACGTTATTCAGGCTCATAG
ACTTGAAAAGTGATTTTATGGTGATGTCCTTTTCGTGCACATATCACGGATCCAACGCAT
TTGTTTTGTAGTTCTTTGTAAGGTTTTCAATAAAATGATCATATCAAATTATACGTAAAT
TTGTTTCTGTCTTCGCTTGCTTTTGTAGGAAGTTGTTCTTTACGTGTTATAGTGCTCGTT
CTTTGTCCACGATATATTCTTTTTCAATACACTTAAGTAAAAAAATGTATGTATTAATGT
AGCCGTTGTAATTTCGTATGGAGTCGTATATAAGATTAGTATAAGCGATCAAACACTATA
AATATATATTAAATGAGAATGCTTCACACATGAAAACATAGTATTTTCACATTTAGAAAC
ATGTTGGCGTTTTAACATTATCACATTAATCTTTGTCTACTTACGTAGGTTAATACGAAA
GAAAACGACGCCATTTTGAATTAAATTCGCCATTTTGAAACCCCGCATTTAAATGAGTAG
TAAGTACAACACGCATTATTTTTGGTACAAAACAGCTTACTAACCTGTAGTATTAAATAT
GTCTGTCGACAAAAATGTCCAATCATTTGAACCTTCGAGCTTGACGACAAGATCGGCTTA
AATGTATATTAGGCACAGAGTTATTTGAAAAAAAAAACTAAAGTTGTATGATATTATACA
CATATATACAGATATTGGTTTAAGAGCAGCTATTATAACTATTTATATATTTTGAATGCG
TTAAGGGATTTTTACTAACAATTAGGTACTAAGCTATGTTAGTCGGTGACGCACACACGG
GAAATGGCAGAAAAGACGCGTCGCATAGGCGTAAGTATAGTTAGGGATCTCTTCATTCTT
CTGTCATCTGTGTATCGCTTGTGGTGGACCGGAAAACCCCAATGAAGGCTTATAGAGACA
TGGCAACAACACTGTCAGTGCTTCGTGTAAAAAAACATGTACATTACACGATTTAATTAT
CACATATTAGTGCTGACCTATTGGCAATGACCAAATAAATTTTGTGTAATAAAAACTTAA
GGTGTCCGTGTTTATTTTTAATCCACGATAAAACTCATGTTCAACTCCATCACACCCCAA
ATTGCATATCAATGTTTTGGCCATGTATTAGCGTAGTGTTACCGTTTTAAGAACACGTGA
CTGTAAAACTCTAAAAGCAATCGTTGTGAACATAATCATTGGTGTGTCTGTAGCTAAATG
TACAATTTTTCTTTTAAATTTAAATATTTTTTCTGTTCGTCAAACCATTTTTGATCTGTG
CAATGCGATCTGACATATTAGACAAGTGTTAACGTTCGTGAAAGAATCTTACATCGAAAT
TTTTTTCTTAAAACGAAACTTTACTTTCTAATGTTACTAATTTCGTGACTATAATGAGTT
TGTTTGCAATTATTTACCTTTCTAACGGCTAATTCCACTAACTCTACCAACAATTGACTT
TTCAGATTTGGACACATGTCAAATATGTCATTCGATATTGTCGGACCATAGTGAGTTATA
TCTTTATGTGTAAGTACATTTGGATGTTAACGAAATATGGTGTTTTCTTTAATAAAAAAG
CGAAGCTCGAGATTACTTTGAAATTATGGTTTTCTTGTTAAGTTTTTCTGACAACCGTCC
ATTGACCATTTCCCCTGATAGCTAAATAATCCGAGATCTGATTTATTTTGAACATAGCTC
AAAATCGCAAGCACAAATAAAGGCGTTTGGTATAAACCCAGTTTTGATTAAACTTTTAGT
AATGTAAGGTAGCTATTTTATCTTTTATTTCGTTTTTTTTTTTCAATTTCATGATTTATT
TGAAATATTATTATGGTATTATTGTATTAACGATAGAACTTCTTTGATGTATGAATTATT
ATATTTTAGCTAAAAATAAAG
(5841 bp)

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