SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39907_c1_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_peptidoglycan_recognition_protein-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0008270 F zinc ion binding
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016787 F hydrolase activity
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.36 TPM:4.23
ORF EntryO_BomoMG15207_5prime_partial:A_BomoMG_comp39907_c1_seq1
Sequence
(Nucleotide)
AAATTTTTAACAGTTTCAAAATTTCTTTCTATTTGAATTACAGACGTTAGTAATTTGTGG
TAGCACTACGTTTTAATTACATAGAAGGTATGACGCAGTACAGACAAGGCAGTTAGGCCC
GGTTTCATTTAAGAATAAACAAGGTAATGGAATGATATTTAAAAGTAAAGTATTACCAAT
TTTTTTGACGGCAGACATGATTAAATCTACTTAAATAAAATTATTTTGGTTAAAAAATAT
GTACTTGATTTTTATTACCCTTATGTAGGCTACAGCAAAAGGCAAAGACCCGATAACAGA
ATGTGTATTGTTTTATGAGGCTTTTTGTGCGATCACAAAGATAGGATACAAAATGTATTG
TTTTAATTAAAGTTCTTAAATTTTTATGTGAACGATTTTTAGTCGTTACGAGGACCGTTA
CTTGATAATTTTACTTCAATGTGTAACAAGAAATTTCAAAATAAAAGAACGACAGAACCT
ATCGCGAAGTAATTGAATCTTCTCGGTTTTCGCCTCCCTTCTGCGATAGAATTAAATTCA
ACGTTATACACACAAACGACAATTCTTTGTCTCTTATTTCCTGAGAAGCCAGCTGGTATT
TCAAACCGGTCAAAATTCATCCAGGCAAACACAGGTGTGCGTTTTCCGAATTCCAGTGTT
GAAAATCTTTTAGTTCTTTCAAGATGTTGCGGCCAGGGCTGACGGTGAGTGGCTTCACCT
GACATTGGCCTAATATTGTGTAGTCAGGCCGCAGAACTCCTTGCTTAACGAGCTGATTTA
AAAGAATGTCTAGATGTTCAAATTGTGCAGGAGTCGTTTTGTCAGTTCTATAATCTCCAA
GGAACATTATCGTAATACTTCGACGGTTCCACCCTTTCAACATAGTACTTAATACGTTGG
CGCCTCTCCCTTCGAATACTATACCATTTCCGCTTATAAGGAAATTGGGGCCGATATCCT
CAAAGCGAGCGTCCAGGTGGCTCTTCTGTACATTTATGATTTTCTTTATGCAGTCGTATT
TCTGATTGCAATATTGGGTAACGGTGTGGCCAATGATAACGAAAGATACCGGTAATTCGA
GGAAATCCATAGTGTAGGGCCTCATTGCCTGCCAGTCGCCCCGTCGCAGATACCACGGCT
CGTGTATATCGAGATCGAGACGAGCTTCGTTCTTGGATAGTGCGTAATGGAAGACGTAGA
AACTGAGGCCTACTGTGACAATGAGCGCCCAGCAGACGAACACGGCGATGCTACAGCGAA
TTTTGCGCGTATTTTGAGACGAAACCAACTCCAGACCGAGTAATTGGCCTTTTATTTCTT
CTGTATTCCTGACTTTTTGTGTGACCGATACGAACTTGGGCCCGATGTGGACCCTCGATG
ATTTGGACACGTTAAGCTGTGATATAGGCGGCGAAACTGCTGCACGTGAAGCTGATGCTA
TCATTCGTTC
(1450 bp)

- SilkBase 1999-2023 -