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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39906_c0_seq3
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X2_[Papilio_polytes]
Ontology
GO:0000166 F nucleotide binding
GO:0000902 P cell morphogenesis
GO:0005388 F P-type calcium transporter activity
GO:0005509 F calcium ion binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005929 C cilium
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006996 P organelle organization
GO:0007595 P lactation
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008022 F protein C-terminus binding
GO:0008361 P regulation of cell size
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0021549 P cerebellum development
GO:0021692 P cerebellar Purkinje cell layer morphogenesis
GO:0021702 P cerebellar Purkinje cell differentiation
GO:0021707 P cerebellar granule cell differentiation
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030182 P neuron differentiation
GO:0030899 F calcium-dependent ATPase activity
GO:0040011 P locomotion
GO:0042428 P serotonin metabolic process
GO:0042472 P inner ear morphogenesis
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0045299 P otolith mineralization
GO:0046068 P cGMP metabolic process
GO:0046872 F metal ion binding
GO:0048167 P regulation of synaptic plasticity
GO:0048839 P inner ear development
GO:0050808 P synapse organization
GO:0050885 P neuromuscular process controlling balance
GO:0050910 P detection of mechanical stimulus involved in sensory perception of sound
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0051928 P positive regulation of calcium ion transport
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060113 P inner ear receptor cell differentiation
GO:0070062 C extracellular exosome
GO:0070588 P calcium ion transmembrane transport
GO:0090102 P cochlea development
Transcript
Level		FPKM:59.45 TPM:46.97
ORF EntryO_BomoMG15205_complete:A_BomoMG_comp39906_c0_seq3
Sequence
(Nucleotide)
GCGACTGCTACTACTAAATTCGAAAATTAAATTGCGGCAAAACCGTGCCATAGCGATTAA
ACGAAAGTCGCGTAGTGCATGGCTCGCATAGCTATCGTGCGCGATCGCGTGTGCTGCCCT
CGTCGTCTCGCCACTACTCTTGTCAGTCAGAAAGCGGACACGGTACGTGTGGTCGCGTGA
TGAGTTGGTGCTCGTAGTATTTTAAGTTTGACATTTGGCGCGTTTTTCATTTAGGTTTAT
TAGAAATAATTAACGAGAAAATCATAGGTTTAAGTTAGTGCAATCTGTGTATTTTCTATT
TATTTCAAGTGTTCGACTAGTATTTCTGTGAATTCCTTTGACGTCGGCTGTGAAGTGGCA
GAACGGGCTCGTGTACTTAGCTGTGTTGCCTAAGTTTTTGTGGTTTTTCTTTTCTCTTTT
GTTCGTTTTCGGAGGTATCCCACAGCTGCCGAACACGACTAAGGTCGTAACCTGCAGCAT
AATAGGGAGCCATACGCCGAGGCGGAAAAACGGGTGCGACACGCACTCGTGATCTAGAGG
GTTGTCGGGCTTGGTGCGGGCGGCGGCCGCGGGCCCGGCACCATGGCCACCGTGGAGGGA
AGGCCGGCGCAATATGGCGTCTCCCTTCGGCAGCTGCGCGAGCTGATGGAGACGCGCGGC
GCCGAGGGCATGGCCAAAATCAACGCGCTCGGTGGACCGCAAGAATTATGCAAGAAACTC
TACACATCTCCCACAGACGGTCTTAGCGGTTCGAAGGCTGACCTGCAGCATCGGCGGGAA
GTGTTCGGTTCAAACTTGATCCCGCCGAAGCCACCCAAGACTTTCCTGACGCTAGTATGG
GAGGCTCTGCAGGATGTCACCCTTATTATCCTAGAAGTTGCTGCTGTTGTTTCATTAGGA
TTGAGTTTTTACAAGCCCGCAGATGACCCCAATGATGCGGCACATTTGGACGAAGAGGAG
GGCCACTACCAGTGGATCGAGGGTCTGGCCATCTTAATATCGGTTATAGTCGTCGTCATA
GTAACAGCGTTTAATGATTACACGAAAGAAAGGCAATTCAGAGGTCTGCAGTCTCGGATA
GAAGGCGAGCACAAGTTCGCCGTGATCCGCGGCACGGAGGTCAAACAGGTGCCCATCAGC
GAGATCGTCGTCGGCGACATATGTCAGATCAAGTACGGAGATCTGCTTCCGGCTGACGGT
ATCCTGCTGCAGAGCAACGATCTTAAGATTGACGAGTCATCCCTGACGGGAGAATCGGAC
CATGTCAAGAAGGGTGAAACATTTGATCCCATGGTGCTATCCGGTACACACGTTATGGAA
GGTTCCGGCAAGATGTTAGTGACAGCCGTGGGGGTGAACTCCCAGGCCGGCATCATCTTC
ACGCTGCTCGGTGCCGCTGTCGACAAGCAGGAGAAGGAAATTAAACAGAAGAAGAAAGGT
GAGGAGGAGGGAGTGGGGGGCGTGGGCGCCAACCACGCGCCGCCCGACGACAACCACGCG
CCGCCCGCCGCCGACAAGCCGCCGCCAGAGCCGCAACACAAGAAGGAGAAGTCCGTGCTG
CAGGCCAAACTTACCAAGCTCGCTATACAGATCGGTTACGCCGGCTCGACGATCGCCGTG
CTCACGGTCATAATCCTGGTCATACAGTTCTGCGTCCGGACGTTCGCCATAGAGGGCAAG
CCGTGGAAGGCGACCTACATTAACAACCTGGTGAAGCACCTCATCATCGGTGTGACGGTG
CTGGTCGTCGCCGTGCCCGAGGGGCTGCCGCTCGCTGTCACACTCTCGCTTGCTTATTCC
GTAAAGAAAATGATGAAAGACAACAATCTGGTGCGCCACCTGGACGCCTGCGAGACCATG
GGCAACGCCACCGCCATCTGCTCGGACAAGACCGGCACGCTGACCACCAACCGCATGACG
GTCGTGCAGTCGTACATCTGCGAGAAGCTGTGCAAGGTGACGCCCAACTACCGCGACATC
CCGCCGCCCGTCGCCGACCTCATCGTGCAGGGCGTGGCGCTCAACTCCGCCTTCACCTCC
AGGATCATGCCATCACAAGATCCAACGATGCCATCCATGCAAGTCGGTAACAAAACTGAA
TGCGCCCTCCTCGGATTCGTCCTGGCTCTAGGGCAGAGCTACGAAGCCGTCAGAGAAAGT
CATCCCGAAGAGTCGTTCACCAGGGTGTACACCTTCAACTCGGTGCGGAAGAGCATGTCC
ACCGTCATACCGCACAACGGCGGCTACAGGCTCTACACTAAGGGAGCTTCGGAGATCGTG
CTTAAAAAGTGCGCCTTCATCTACGGGCACGAGGGCCGCCTGGAGAAGTTCACGCGCGAC
ATGCAGGAGCGGCTCGTGCGCCAGGTCATCGAGCCCATGGCCTGCGACGGGCTGCGGACC
ATCTCCGTGGCCTACCGGGACTTCGTGCCCGGGAAGGCGGACATCAACCAGGTGCACGTG
GACCAGGAGCCGCACTGGGACGACGAGGACAACATCGTGAACAACCTGACCTGCCTCTGC
GTTGTAGGGATCGAGGACCCCGTGAGGCCCGAGGTTCCAGAGGCCATCCGCAAGTGTCAG
AAGGCCGGCATCACGGTGCGCATGGTGACGGGAGACAACGTGAACACCGCGCGCTCCATC
GCCATGAAGTGCGGCATCCTCAGGCCCACGGACGACTTCCTGGTGCTCGAGGGGAAGGAG
TTCAACCAACGCATACGGGACGCCAACGGAGAGGTGCAGCAGCAGCTGGTGGACAAGGTG
TGGCCCAGCCTGCGCGTGCTGGCGCGCTCGTCGCCCACGGACAAGTACACGCTCGTCAAA
GGCATGATCGAGTCCAAGGCATTCGACACGCGCGAGGTGGTGGCCGTCACCGGGGACGGG
ACCAACGACGGACCCGCGCTCAAGAAGGCCGACGTCGGATTCGCCATGGGCATCGCCGGC
ACGGACGTGGCTAAGGAGGCGTCCGACATCATCCTGACGGACGACAACTTCTCGTCGATC
GTGAAGGCGGTGATGTGGGGCCGCAACGTGTACGACTCCATCGCCAAGTTCCTGCAGTTC
CAGCTCACCGTCAACGTGGTGGCCGTCATCGTGGCCTTCATCGGAGCCTGCGCCATCCAG
GACAGCCCGCTCAAGGCGGTCCAGATGCTGTGGGTGAACCTGATCATGGACACGCTGGCG
TCCCTGGCGCTGGCCACGGAGATGCCGACCCCGGACTTGCTGCAGCGGAAGCCGTACGGA
CGGACCAAGCCCCTCATCTCGCGCACCATGATGAAGAACATCCTCGGACAGGCCATCTAT
CAGCTCTTCATCATATTCATGCTGTTGTTTGTCGGCGACAAGATGCTGAACATCCCGTCG
GGCCGGTACCAGCCGCTGGGCTCGGAGCCGACGCAGCACTTCACCATCATCTTCAACACG
TTCGTGATGATGACCCTCTTCAACGAGATCAACGCCAGGAAGATCCACGGCCAGCGGAAC
GTGTTCGAGGGACTCTTCACCAACCCCATCTTCTATTCCATTTGGGTCGGGACTGCGCTG
TCGCAGGTGGTCATCATCCAGTTCGGCGGCATGGCGTTCAGCACGGCGGGACTCACGATA
GATCAGTGGCTGTGGTGCTTGTTCTTCGGAGCGGGGACCTTGGTTTGGGGCCAGCTCGTC
ACCACGCTACCCACTAGGAAAATACCCAAGACCCTCTCGTGGGGTCGCGGGCAGGCCGGC
CAGGAGTGCGCCCCCGCGCCGGACTACGACAACGAGCTCGACAAGAAGCCGCGCGCCGGA
CAGATCCTCTGGATCCGCGGACTCACGCGCCTACAGACGCAGGTGATAGGTGGCGAGTTA
CAAGAACGGTTGATACCGGTCCCCTACAGCAAGACATCCACAGATCAAGCTATCCGCGTG
GTGAACGCGTTCCGGCAGGGGCTGGACTCGCGCGGCTCGCTGGCGGACGCGGCGCTGGCG
GAGGCGCTCCGGAAGCAGACGGCGCTCTCGAAGCGGTACTCGCAGTCTTCGGGGGCAGAG
GCCGAGCACGCGCTGGCGCCGCACGACCTGGACGTGGAGCGCCTGTCCAGCCACAGCCAC
ACCGAGACCGCGGTGTAACGCGCCTGCACCATATCAGTATTACGCGACCGACCCACGCCG
CGAGCCCTGACCTCCCGTTGTTGACTAGTGTGTTTATTGTAATCGTTCGATTGTTTTGAA
ATATTTTATTATTATACGCGCGTCGGTCGCGTCGCGCGTCTGTTGAACGAATAAAATGTA
TTGTCTAATTATTAATTTTTAGATTTAAGCGCAGGGGTGAGCGAACGGACTTGTGTTTTG
CAAAAAAATAATGATATACTTAATAAAATTAAAAACGTATAAATCGTCGCAAACCATCGT
GTCGCCTTTCACACGGAATGAAATGTTTTATATTGCTTTTGTGAAAGATGAGCGCCCGAA
CAGAAGCGGAGAGCGCGTCCGCTCCCGCTCCCGCTGCCGCTCGTGCGTCGGGCGCGCTCT
CCGCTCGCAACATTCGACTAAATTATTAAAGTGTATTAGTTAAGGTGTTTGTTCCGAGTA
ACGTTTTGTTGGTTTCCCCCACTGCGTGTACGTACCGCGTGCGGTCGGGCCGCCGCCGCA
CCGCCGACCGCAACTGACGCTAGTCTCTTGTCAAACAGATAATTATTCAGTAATCGTAAT
GTAATCGTTGATCATAAATACTTGAAGTTTGTTGAAGAGTACATAGGTAGTGTACGGCGT
GGATATTTTCGTGAGGGTCGGTACGGGACGGCCGGTGCCGCCGCTACAGTAGGCGAGTTA
GCATCGCACTGGCATTTCATGATCGCGTGGGACGCCGAGTCGGCCGCTCGCGCGTTAGAC
TAAATCAAAACGATTATAGCGAATCGGCAATGTTCAATTTTGTATAGAACGTTTCATAGT
AGCGATATTTGAGAGTTGTTACGTTTTATTTGGGCGACCGCCGCGGCCGCACCGACCGCG
ACGGCGGCCGCGGCTGTCGCGTGCTCTACTATAACTATTAAACAATCTTGTAAGTAATTA
AGTATTAGCTTCGAATCAATAAAGCCTTTTTAAAAAAAACTTAGTTTAAAAATGAAACTA
TTGAAAACTTCACATATTTAAATAAATATAAAAATATAGTTATGATTTCAGTGAATAGAG
GTCATGGTATCGTTTTGTGTATATTAAACTATTTATATAAATATATATTATATATATGTA
TAATTTCGTTGATATTCGTTTCACGAGTTTCCCGATGAAAGACATAAATAATTAGGAGTC
GTTAACGTGCCAGCGTAGTGTCGCCGGCACAACTAGCCGCGCGTCGCTTCAGTCTAACAA
TCAATTGTTTTTGACACAACAGTCTGCCACTAACCATTTTAGGTGATAAGTCCCATTGTT
GTATTTTTCGTCTCACAATAAATGAAATCTATTTTATTGTTTTTAAAAAAAAAAAAAAAA
A
(5461 bp)

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