SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39903_c2_seq5
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_lon_protease_homolog,_mitochondrial_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009725 P response to hormone
GO:0010044 P response to aluminum ion
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030163 P protein catabolic process
GO:0034599 P cellular response to oxidative stress
GO:0042645 C mitochondrial nucleoid
GO:0043531 F ADP binding
GO:0043565 F sequence-specific DNA binding
GO:0043623 P protein-containing complex assembly
GO:0051131 P chaperone-mediated protein complex assembly
GO:0051260 P protein homooligomerization
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0051880 F G-quadruplex DNA binding
GO:0070182 F DNA polymerase binding
GO:0070361 F mitochondrial promoter sequence-specific DNA binding
GO:0070362 F mitochondrial promoter sequence-specific DNA binding
GO:0070407 P oxidation-dependent protein catabolic process
Transcript
Level		FPKM:1.81 TPM:1.43
ORF EntryO_BomoMG15167_complete:A_BomoMG_comp39903_c2_seq5
Sequence
(Nucleotide)
GTTAAAATTTGTTGAAAAGTCTGGAAAAATAACCTAATAATTATTAAAATCAACAAACCT
TAAATGAAGAACGTTATATTATTTAAACGGACTTTTGAAAAATACTATTAAAATGCATAC
AGCAAGTGTTCTGCTACGAAATTCGATACTTAATCCTAAATTGTGTTCGACACGGCTCTT
GAATAATATAACTAGAATTGCATCACACAAACCGGTGCAAAGGTTGTCTAGTAGTTTACA
CAGATTTAGGGGTCCTCGGGTCTGTGGTCATATTGACAATTATTTATGTTCTTCCAAAGA
CTTAGGTTGTACACGATTATTTTCGACCGGGAATAAAGGTGATCCTCCAGAAGACGAACC
GGAAATTAAAGACGAGACTCCTCTCTTTAGTAGTCAACTACCGGCAACGGTCGCTGTGCC
GGAAGTATGGCCGCAAGTTCCAGTTATTGCCATTAATAGGAATCCAGTGTTTCCAAGATT
CATTAAGTTAATTGAGATATCGAACCCAGCCCTAATTGATCTAATAAGGCGTAAAGTTAA
ACTCAATCAACCATATGTTGGTATATTCTTACGTAAGAAGGAAGATGAAAAATCTGACAT
TGTATCAAGCTTGGAAGATGTACATGAGGTGGGAGTATTTGCACAGATACACGAGATGCA
AGATATGGATTACAAGCTGAGGCTCGTTGTGATGGCTCATCGTAGAATAAAAATCACAGG
CCAGTTTGTTGAGGAAGAGGTTGAGACTGGTCCTGCAGAGTCCGATGCTGAGCGACGGAG
GCGAAAATATCGTAACACAAGGAAGAAACCAGCTACTGATGCAGACAATGAGCCAAAGAA
AGCACCCCCAGACCAGGTTCTGATGGTGAAGGTTGAGAATATGATGCACGAAAAGTTCCA
GCAGACAGAGGAAGTCAAGGCTCTAACACAGGAAGTCATCAAGACAATTAGAGATATTAT
TAATTTGAATCCTTTGTATAGAGAGTCCCTTCACCACATGCTGGCCCAAGGTCAGAGGGT
GATAGATAACCCGGTTTATCTAAGTGATCTTGGAGCAGCTCTCACCGGTGCTGAACCAGC
CGAGTTACAAGCTATTCTGGAGGAAATGGATATACCAAAAAGATTGTTGATGTCTCTATC
TCTACTGAAGAAGGAGTATGAACTGTCGAAACTGCAGCAGAAGATAGGCAAAGAAGTCGA
AGAGAAAGTGAAACAGCAACACAGGAAATACATTTTACATGAACAACTTAAGGTAATAAA
AAAGGAGTTGGGCCTGGAAAAAGACGATAAAGATGCCATCGGAGAGAAGTTCAGGGAGCG
TCTGGCCGACAAGACGGTGCCTCAAGCCGTGCAAACCGTCATCGATGAAGAGCTCAACAA
GCTGAACTTCTTGGAGGGACACAGTTCTGAGTTCAACGTAACACGGTGTTACCTGGACTG
GTTGACCTCCCTCCCTTGGGGCATCACCTCTGAGGAAAACCTCAAGTTGGAAGATGCTCA
AGTGATTTTAGACCAAGATCACTATGGCATGGAGGATATAAAGAAACGAATCCTCGAGTT
CATTGCGGTCTCGCAGCTGAAGGGCACCACCCAAGGCAAGATACTGTGCTTCCATGGACC
TCCAGGTGTAGGCAAGACCAGTATAGCCCGTTCGATAGCTCGTGCGCTGAACCGGCAGTA
CTTCAGGTTCTCCGTGGGCGGCATGACGGACGTGGCCGAGATCAAGGGTCACCGCAGGAC
GTACGTTGGCGCCATGCCGGGGAAAATCGTGCAGTGCCTCAAGAAAACCGGCACCGAAAA
CCCTCTGGTGCTGATCGATGAGGTCGATAAGATTGGCAAGGGAGTCCACGGCGATCCGTC
GTCGGCGTTGCTGGAGCTTCTGGACCCGGAGCAGAACAGCAACTTCCTGGACCACTACCT
GGACGTGCCCGTGGACCTGTCCCGGGTGCTGTTTATCTGCACGGCGAACGTCGTGGAGCA
GATACCGGAGCCGCTGCGGGACAGGATGGAGCTCATCGACATGTCGGGGTACATCGCGGA
GGAGAAACTGGCCATAGCGCAGCAGTACCTGGTGCCGACGGCACGGCAGAACTGTGGGCT
CTCCCAGCAGCAGCTGGCGGTGTCGGAGCCGGCGCTGCTGGCGCTCGTGCGCTCCTACTG
CCGCGAGAGCGGAGTCCGAAACCTGCAGAAGCACATTGAAAAGATAGCCCGCAAGGTGGC
TTATAAAATAGTGAAGAAGGAAACGGAAGAGGTCAACGTCACGGAAGAGAACCTGTCGGA
TTTGGTCGGCAAGCCTAGCTTCAAGCACGACCGCATGTATGACGTCACCCCGCCCGGCGT
CATCATGGGACTAGCCTGGACCGCTATGGGGGGCAGCACACTGTACATAGAGACTGCACT
GAGGAATAGCACACAGGACGAGAAGTCGCCCTTCGGCTCGCTGGAGCTGACCGGCCACCT
CGGGGACGTCATGAAGGAGTCCGCTCGCATCGCGCTCACCGTCGCTAGGAATTACCTCGC
CACCCACCACCCTGACAATAAGTTCTTGAACACGAGCCACCTCCACCTGCACGTGCCGGA
GGGCGCCACCCCGAAGGACGGGCCGTCGGCCGGGGTCACCATCACGTCGGCGCTGCTGTC
GCTGGCTCTGGGCAGGGCTCCGCGGGCCGACCTCGCCATGACGGGGGAGGTGTCCCTCAC
CGGTCGGGTGCTGCCCGTCGGCGGCATCAAGGAGAAGATTATAGCCGCGAAACGCGTGGG
CGTGAAGTGCGTGATCCTTCCGGAGGAGAACAGGCGGGACTACGAGGACCTGCAGTCCTT
CATCAAGCAAGACATAGACGTGCACTTCGTCAGCACGTACGACGACGTGTTCAGGGTCGC
CTTTGGAGAGCAGCAGATATTCGAGGCCGACCACTCATCCACATCGGAGCTTTAATATAA
ATGAAGATTTATGCTGTTCAACATTATTTTTTTAAATAAAACAACAACAAAAC
(2993 bp)

- SilkBase 1999-2023 -