SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39833_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_unconventional_myosin-XVIIIa,_partial_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
Transcript
Level		FPKM:2.65 TPM:2.09
ORF EntryO_BomoMG14850_internal:A_BomoMG_comp39833_c0_seq1
Sequence
(Nucleotide)
GCCAGCTCGTCGCCGCCGCCGCCCCGCTCCTCCAGCTCGCGCGCCGCCGCCGACAGCCGC
TCTTCTTTCAGCTCCAACTCCATACGAGCTTCAGAAAGGGACTGCTCCATTGCGAACTTC
TCCGCCTGCGCTAGATCTCTCTCGCGAGAGATCCGCTCCTTGGCCGATCGTTCTCTCTTC
AGTTCTTCCTGCGCCGCCTGTAGCTCACCGTCGAACTTACGCTGGCGTTTCTCCAGCAAG
TTGTTGCGGCACGTCTGTTCGTCGAGAAGCGACCTCAGGTCGGCCATGTCGTTGGTGAGT
TTCTGCAATTTTCGTTTCCATTGCGCGGCCACGGCTCGCTGTTCTTCGACCTCTTCGTAT
GCATCTTGAACCTTCTTCTCCAACTGCTTCTTGACCGTAACGAGTTGTTCGAGGTCGTCC
TCGTGTTGGCGTCTCAATTGCGCCCTGATCAGCTGCAGCTCTCGGTGGGCGCGTTCGTAT
CGCCGTTTGTACTTGTCGCCGGCGGAGGCCGCGTCCGCTTCGGATCCCTCCGAATCTGAA
TGTTCCGCTGCTCCGTTATCGGCCGAACGCCAATGCAAGAGTTCAAGTTCTAGACGTTCT
GAAGCCTGCTGTAATCGCTGGTTATTGGCGACCAAGTCTCTGTTCTCCTTCTCCACTCGA
AGGCGTTCTGCAGCCTCGGCGTCCGCTCGTTCCGTTGCGAGTCCGGCGGCCGCTCTTTCC
TCTGCTAGCTCACCTCCCACTTCCGAGAGCTTAGTCTCGAGTCGTTCGGTTTCGCTCTTG
TAATGTGTCCTTTCGTTTTCGACTTTGTCCAATTTAGAACGAAGCGTCTCCAACTCGTCC
TGTGCTTGTTTAAGTCGATGTTCAGTCCTGTGCACGGCGAGCAGGGGCGTGACTCGCACG
AGCAGCCTCCACCAAGGCCAGTCCCGCACCGTGAGGAAGGCCCGCACGTTGCGTTGGATG
CACCGTGCGGCCGTGTGCTGCGTCCGCAAACGCTGGGCCTTGCGTCGGGCGAGCAACCCG
CGCGCCCTCGCCTGCAGGCGAACGAGCACGCGGGCAAGCGCGGCGTCTCGACGCGCGTCC
AAGCCGCCGACGACGCCGCCCCTGAACATAATCTGAGTGAGCCCGAGCCTGTAGCTGGTG
ACGTCCAAGTCCAAGGCCAGGAGCATGTCGTCGACGACCTGCCTGTCCGAGAGGGTCTGC
TGCTGATTCGTTTCGGAGTCTTCACTCTCGGATGTCGCTAGAAGACGATATCTTCTGGCG
AATTCCGACAGCGGCATGTGCTCGGGGAAACCTTGCTTGTAAAGCCTCGACGCGTCCAGC
AGTTGGAATCCGCGGAACTGCGATCGTAGGAGCGGCACGTTGACGTCATCGGGCGAGTCG
GTCGGTCGGTTCGCGAGCAGACAGCACACGAACATGACGCCGCTCGTGCCGCACCGCCGC
AGCGTGTCCACCACGCCGTCCGCAACGAACTTCGCTTGCAGGGCGGTCGAGCGACGCTTC
ATGCCGGCCGTACCCGAAGTAAGGGTTCGTCGGATAGAAGAAGCCCGCCGTAGAGTAGTG
GCGTCCCCCACTGCGGCCGACCACGCGCTCACGCCGCATGCGCCGCGAGCCCACGACGAC
AGCCGTGACACTTCCTCGTTCTGGCTCTCCTGTAGTAATGTGAGAGACTTCTTCGTGACT
GGGTTCTCGCGGCTCGCCTTCACCCAGCCGGTGACGTCGTATAGCACCGGGTTAGTTCCC
TGTAAATGCTGCAATATAAACTGTCTGGCATGCGGGGCCTTCTTGATGAGGTACTGCATC
TGATTCGGCGGACCGTAGTGCGTCATCACTCGCTCTAGGAACGTGTCGTCGGACGAGCCG
GGATACATGGACTCTTCGTCTAGTAGCCATAGTAGTCCGCGTCGGTCGCATTCCCGCAGG
TCGGTCTGTGAGCTCCGCACGATCGAGTTCTGCGGAGCCTTATCCAGCAGTTCCACCATC
GGTCCCGGGCTCACCGCTTCCGACAGCCAATCTTCATCAGCTCCGTCGTCGAGCGCGATC
CCCTCCTGCGCGTACCGGTCCCGCGGCGCCACCAGCATGGCCTCGTGGAACACAGCTTGG
AGACGTTCTTGTAAATAGTTAGACAGTAGTTTGGACAGCCCTGCCCCGCTCTGTTGTCCG
GCGCACATAGGGTTGTCAGCTCCGGGAGTGTCCAGCAATAATATCGAAGCTGATGTCCTC
GCCGACGTGGATAAGCTCCTGTTGACGAGTGCAGCGACGATGTTGAAGGTTTCGTTGTAG
AGACCGTTCACGAACCCGTCCAGCGCTTCAGTCGCCGAGATCTCTTTTTCGTTCGAAGGC
GACGGAGTTCTCAAGTTGGAATTAGACTGTGGGGAAGTGGGAACAGTTGCGAAGACAGAT
CGCATCAACTCCTCGGGAGTGACGCCCAGCATCTTGGCAGCGCGCTGACCGCACCCCGTG
CTGGCGAATTGAAATTTGACGGCTGATCCAGAGTTGGCTTTGACGGCACCAGCCCATCCT
AAATGACATATAGCAGCCATGATCTTCCAAATGGCCATCTGCTCGGATTCCGTAACGCCC
AGTTTCTGCAGAGCCTCCTTTAGCGCTGAGAATTCGGCGGGAGCGTCGGCCTTCTCTTGA
GAGCTGAGGAAGGGGTTGGGCGCCGTCACCGGAGCCTGCTCGAACAGGAGTTCGCGACGG
AGGCGACCGTCGCAGCCGTGGAAGAGCGTATGGAGTGCTCGAAGCGTTGTCTGACCAGGT
TTGAAGTCAGGTAGTAACGTCTGCACTGAGGCGGAGACGAGAGCGCCGCCGCCGTCGAAG
TCGAGCGACGTCAGAGACACGAAACGCGACGCATGAGGATTAGATCCAGTGCGACTGGAT
CCAAACATGTGTAGAACATCGAAAGCTGCGTCCAGTCGCTCAGGAGTCAATTTCGAGCCT
TGAGTTGGGTAGGCACTTGCCAGGTACCAAACGCAGTGCCGCATTGCCGATGTCTTACCC
GAACCAGACCTGCCGAGGAAGACTATAGCTCGATCTCGTCTAGATGCGAGCATACAGCGG
TGCGCAGATTGAGCTGCGGCGAACACGTGGGGCGGCATGTCATCGGCGCGACAGCCGCGG
AACATAGCCGCCACCTTCTCCGTGTAAATCGGGGCAGTCCGTTTAGGTGGACCCATTACC
AGGAGAGCGTGACCGGCGCGGGAGTGCGTCAGTCCGGCGGCATATCGAGATCTCAATACA
TTGAGAGCGCCACATTCATTCAAACAACGCAGGGAGGCAATGTCTTCACAGCGCTCCAGC
TGAATCGGATTCGCCTTCTCTAGGTCATCTTCATCAACAGTCAGGACCTCCCCGGTTTGT
AGTACGCGTACTTTAGTGCGACCAGCTTCTGCGTCACCCTCTCTCACTACGGCAGTGAAG
CCACCGCGATGCGCCAGCCACATGTGACCGGCTTGGAGCCACTCCTTTTCGCATGCTAAC
TGCTCCTCCGATTTTGCCTGGGCGGATGTGAAACGGCGACTTCCGGACCGGCTCAGGGTG
CCTCCACGGACGTTGCTGTCTAAAAGATCCACGTCACCGCCACCGTCTGCCGCACGTCTG
CGCGACAACTCACACAGCTCTGCTATTGGTTGCACCTTGATAGTAACGTAATCTTGGCTG
CCCTTAATCAGATCGATGACCTCTTCTCTGCTTTTTTCCTCAACGCTGATACCATTAACT
TCGAGCAATCTGTCACCGGGTAATAGGCCCGTCTCGCTGGCTCCAGGATAAGAGCCGGGC
TCTGCTAGGATAACGGCCTTGTAAATCAATTTGCTGATCAAATTAGTGGTGCCACTACAT
TTGTT
(3845 bp)

- SilkBase 1999-2023 -