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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39772_c0_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Bre1_isoform_X2_[Plutella_xylostella]
Ontology
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:7.01 TPM:5.54
ORF EntryO_BomoMG14649_3prime_partial:A_BomoMG_comp39772_c0_seq2
Sequence
(Nucleotide)
ATTTGAAGTTGTTACAGCATAACATAATAGTTTAGATACACTTGCTTTTAGAGCCATGAC
AGTATTGAACCAAGTTTTATGTAAAGGATAATAATAAACATGTAAAATCTAAGACCAGAA
AAACAATATTCAAAATTGTCATTATTGACAAGCAGGTTAAAATGTCTAAGCGAGGTGCCG
ATGAAGGTGGCAACGGCAGTAGCCAGCCACCGATCAAGAAGGTTCATTTCGAACCCCATC
TTATAGGACCTGTTTCTACCTTGGAAGAAATGGACATTAAAGTTTTACAGTTTCAAAACA
AAAAATTAGCTCAGAGGATAGAACAACGACATAGATGTGAAGCAGAGCTCAGGGCTCGAA
TAGAGCAGCTTGAGAAACGTCAAACACAAGACGATGCTGTCCTCTGTGTAGTTAACCGTT
ACTGGAATCTCTTGAATGAAGACATCAGAGTTTTACTGCAGCGTTTTGATGCAGAAACAG
CTGATGAATCAGAAAACAAAAATGAGAATGAAGCCACAACATCATTTTTAATGCAGCTGT
CAACATGGGACAAGGAAGAGTTAGATGCACAATTGGCTAACAGAGTGCAAGTTAGCAAAA
GAGCCGTTGCTAAAGTATTACAAGCATTTGATCGCCTACAACAGAGAAATGATAAAATTT
GGCGTGCAATCAAGGGTGATGGAGACGGTGGGGCAGCCCCATCGTTGGATGCGACAGTTC
GTGCAGCCAACGAGGAAGTGACGGCCGAAAATCGACGTCTGCAGGGACTTTGCACCGCGC
TACACGAGGCGCACCACGCCATGACGTTGCGAGTCGCCGCATTACATGACTCCCTCAACA
GCCGGGATACTGAGAATGCTGAGCTCAAAAATCAAATTGATGACTTGCAGTACGAATTGA
TGAAGGTTCGATCCCGCAACGACAAGCTCGAAAACCACTTGGCCGAGGCGATAGAGAAGC
TGAAGAGTTACCATCAGTCGGGCGTGACCACGGCGGCCAGTGCTCCCGCGCACTCGGGCG
CCGCCGCCGCCAAGCTTGAGGACGTCGCCGCCGAGCTCGAGGAGCAACGGGAGCTGGCCA
ACAATCGCCTCGCCGAACTCGACCGACTGCATCGCCAGCATCGGGACACGCTCAAGGAAG
TCGAAAAACTTAAGATGGACATCCGACAACTGCCTGAGTCAGTTATAGTAGAGACTACAG
AATACAAATGCCTGCAGAGTCAGTTCTCGGTCCTTTACAATGAGTCTATGCAGATGAAGA
CAGCTTTGGATGAAACACGACTCCAGTTGCAGAACGCTAAGAACTTGCACATGCGACAGA
TTGAAATGATGGAGAGTGAAGAATTATCGCGTCAAAAAGCGCTCCGAGCAGAAATGATTC
AGTTGGAGGATGTATTGGGGCAGTTGCGAAAAGAGTATGAGATGCTGCGCATAGAATTCG
AGCAGAACTTAGCCGCCAACGAACAAACGGGACCCATCAACAGGGAGATGCGACATCTCA
TTACTTCCCTGCAGAATCACAACCAACAACTGAAAGGCGAGGTACATCGTTACAAGAGGA
AATATAAGGACACCAGCCAAGAACTAAATAAGGCTCGCAAAGAGGTGGAGGAGGCCAACA
CTCGTGGCGGAGAGCGCGGCGACGAGAAGCCCCTCACTGTCAAGAAGGAAGAACCCGACC
CCGAGGGCGATGACGTCACTTGCGGCAACAGCGCGGGCGAGACGAAGTTGCCTCTCTCCA
AAGATCACGGCCGCGCCAAGATGCAGGAGCAGGAACAAATAATCAAGGATCTCAAACAAC
AATTGAAAAAAGCAGTGAATGAGCAGAAAGAGTTGAAGTTACTCTTGGACATGTACAAAG
GAGTCAGCAAGGAGCAGCGGGACAAGGTTCAACTGATGGCGGCCGAGCGGAAGGCTCGAC
AGGAACTCGAGGATCACCGGCAAAAAGCCAAGATGGCACAGGAGAGTAAACGAGAGCGTC
GCATGGCGGACGAGGATGCGCTGCGTAAGATCAAGCAGCTTGAGGAGCAGAAATACGAAC
TGCAGAAGCAGTTATCCTGTGCGAGGCCCAATGCTGACGCCCTGCATGGCTTCTCCAGGC
CCTTCGCTGGATCACCTGAAGAAGAAGCATTACTGAACGAAATGGAAGTGACGGGTCAGG
CCTTCGAAGACATGCAGGAACAGAACTCGCGTCTCATCCAGCAGCTGCGGGAGAAAGACG
ACGCGAATTTCAAGCTCATGTCGGAGAGGATAAAGGCGAATTCATTACATAAATTGCTGA
GAGAAGAGAAACAACTACTACAAGAACAGGTCATAACTCGCGACCAGCAGATAGAGTCAA
TGGGCGCGGTGGCGCGGCGACTCGAGGAGAAGGAGCGGCTACTGCAGGCCACGCTCTCCG
CCGTCGAGAAGGAACTGTTGCTCCGGCAGCAAGCCATGGAGATGCACAAGCGGAAGGCCA
TCGAGTCTGCGCAGTCTGCGGCCGACCTCAAACTACATCTCGAGAAGTACCACGCTCAAA
TGAAGGAAGCGCAGCAGGTCGTGGCCGAGAAGACGAGCGCTCTTGAAGCCGAAGCGTACA
AGACCAAAAGACTACACGAGGAACTTGCAATATTACGGCGAAAAGCGGAGAGGATGAAGA
AAATGGAACAAGCCGGCAGCAGCATGGACGAGGTCTTACTCGAGGAGATCCGCGAGTACA
AGGAGACGCTCACCTGCCCCTCCTGCAAGGTGAAACGCAAAG
(2742 bp)

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