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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39730_c1_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_10_[Bombyx_mori]
Ontology
GO:0002039 F p53 binding
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010506 P regulation of autophagy
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0036459 F thiol-dependent deubiquitinase
GO:0044325 F transmembrane transporter binding
Transcript
Level		FPKM:3.97 TPM:3.13
ORF EntryO_BomoMG14461_5prime_partial:A_BomoMG_comp39730_c1_seq1
Sequence
(Nucleotide)
TTAATATTCATATGTATGATCAATATTCGTATAGTATGCATCATGAATTCCATATACTAG
ATATATTTTTTTACATTTTTTTATATATTTTATAACACCATTAATTCCATATTGTCAAGG
ACATATATTTACTTATGAAATACGACTTTTAGGCTCATAACTTGTAACTATAGTATAAAA
TCGTAAAAAACGCGTTGTTTTGCTAGGTTTGATCAAAGCAACGAAAATTTTGTACTAAAA
GAAAAACCTTAATTATTTACAGACAAAATTATCAAGAAGCACATACATATAATACAATTT
CAGAGACCAGCTTAAGATTCAGATACCTTTTTACACAATACATTTAATTAAAACACAAAA
TGTACACACTCTGCTTAAAACTTCATTAGTTTGGCCTATATATATAGCTATATACATTTT
CAAAGATGAAACGGTTCATGTGTCAATTTTTTAACATTAACACAGAGTTCGTTGGATTAA
CAAGGCACAATCCGTAAGTAAAATTTATGTAAACTTATCCCAAAAGTTACATCCCTGCAT
TGTTTAATTTTTTTTAAAGTGAATTAAAATTGAAAGTAAACCAAATACACACAATTCATA
AATTGCAATATGTACAATAATCCCTTGAGATAAATTTTGAGCATTTCAATTAGCTCAGTA
GTCAAAGTCTTTCTTTGCTAGTTTATAAAAATCGAAACCCAATCAAGCAGTCACAAGACA
ACATTTAGTCATTCCAAATTAGAAAACAGTGCCTGTCGTAATTCTGGTGACTAATAAACA
CAGTTTCCGAAGCACATTTACATGGATAGAATGAAAAATCCAGTAAAATCCTTAAAAAAT
GTTCCCACAACATATCGCCACTACACACCGCACTGGTTATAAAACTGCTCACTAAGACAG
TACACAAATTCGCTCACTTTGACTTACGATTGATACATTCCGAGGACGCTGGTTTTACCA
GAAGTGCCCGTGGATGTTTATTGTTCGAAAGTAGAAATGAGCGAATGTAAACTCGGTTCA
TTCAGTCTTCACCGGCCTGTGAGGCAGAAGAGTGTCATGGCGTCTATACATGAGGAGGTA
CGGCATTCTCGGAGGTTTCGGCTTCAATACTTGGGCATCTGTTACTTGAGTGACAGTTGA
ATCATCATATCTTATCCATCCAGCTTGCCCATGATAAGTGTCAGTGAGATAGTGACCCTT
AACTGCCTCAACACCCTCATGGTACACCACTGCAAACAGCTTATACAATCGCTGTTTTGT
TGTGTACTTTGGTTTTGATGACATTATTTTTGGATCAATTTTCAAATCAACAGGGAAATC
AATGTTCTTCACAATCTTAGCAGTATGTCCATCCTGGTCAAATTGGAAACACTTAAGATG
CAACAACAATGTTACTGGGAGTTCTTCCAGAGCCAATTGCTGCCATGCATCACTGACACC
TTCCAGAGTATCTTTTCCTGCCAATAATTCTAGGGCTTCTTTAACACTGGTTGCACGCTC
AATATCAAGTTGTAGAGTGAAGAAAGGTTGCACAGCATCAGTGACGTCATGATGCTGAGC
GCGATGCAGCCGCAGCCTGGTTCGTCCGCGAAAGATATCGGCAACGGGAGTACGACGCGC
CGCCCAACGACGTTCCACAGCCCCACGGTTTCGGGGACCCATTACCTTCCATTCATCATC
GTCATCCTCCTCTTCAGGCGACTGATCAGAAGTGACAATTCCATTGGGCTGGCTGTTGTT
TTCTTTGGGCTCATCGGGCTCAACTAACTTCATCAGCTCAAGCATTTCATCATTGAGAGA
GTTCAGAAGACAGCCAAGAAACTCTTCTGCATCTTCTTGTCTACCTTCCTGTGAGCCAGG
GAAGGGTCGGAGCGCTCGCAGTACACGCAGCCCTGCGCCACCCTCGAGCGGCGGCGCGCC
GGGCACTAGCGGTCCGGTGCTCGCCGCGCTGGCGTTGCTTCCACGACCGCGCCCGTTCGT
TGTCGTCGTGGTGCCGTTTGCACTGAACTCGTAGCATAGTTCCACCATGGAATCAATTAC
TGGTGTGCTGGATTTGCCGCGACGTGTTTGATACGGCAAGGCTTTGAGCAAGTTGTAGAA
GGGAGGGCACGCGATCAACGCTTGCAAGATTGCATTTACATAGCAATAGTTCGATCGGTT
AGTCAAACCGCGAGGCAAGATTGCGACCGGACGGTGATCTAGCTGATATTTAGTCAGAAA
TTCTCCCATTCGATAAGAATTAGGATCGTCGCTGAAAGGTGAAGGTTGCGGTGGCACGGC
AGGGGTGGAATCGCGTTGTACCGGAACTTCACGCTGTTCGGCATGGGATTGGCCTGCCGT
CGGTTTTGGAGTTATCATTGGTGGCGACTGAGTGCTACCAGAATTTACCGACGTCTTCTC
AGAATACGACACCGCTGGAATCGAGGCTGGAACCGGACCATTTTTATCGGGAGCGGCACC
CGGCAAGGGAGAGGCATCAAACGGTGGAACTTTGGCTACCGGTTTTTGCAAGTTGGGAGC
GACAGGAGGTGAACTGGATATCGGGCTGACTGACTCTTCAACGACAGGAGCTGCAACTGC
TGGAACGGGCGCCGGTGCAGGTATACTAGGTTTCGAAGAGAATAGACTAGCCCACGATTT
GCCAGGCGCGGGTTGCGGTTGGGGCTGTACCACAGGCGGTGGTGGCTCGGTACGGTTGCG
AGGTGTCGGTGGTGGAGGGAAATCGGAAGCCGTCGGTGCTGGTGGTGGAGGTTGAGGGGC
GGGTGGTGGCTCTGGAGCTCCGCTAGCTTTTCGGGAATGTCCGAAAGGCGCTTTACTTGT
CACAATCAACGGTTGACCCGCAGAATGAAGCGTAATAGATATTGGCATAGGCGCTTTACT
CGGAGGTAGTGGTGGTTCTCTTTTGATATGCTCTGTGACCATAGATCTCTCATTATTGTC
TCCCATATCATTTGATGGTGATCGATTAGATGTTCCTTCACGCTTTTGTCTGTTTGCAAA
CGGTGCTTTAGGAGTCGATACAGTCTGCTGGAGTGGAACAACAGTTTGAGGTGTCGCCGG
TTTAGAGGGTTGTTTGCCGCTTGAAAACGGAGCCGACGGTCCCTTGGCCGACTTCCCAGT
AGTTGGAGGTATCTTTACAGCTGATGCAGCAGCTGTGGTTTGTGGCGGGAAACTTCTTGC
CACCGCCGGAACCTGGTTAGTGTTGGTAGCATCCATTTTGTCAGAGATTGAACTTGTTTG
TTTTGAATCAATCTTTTGAGGAACTTTATCTACCATAGAAGGAACTTGTTTTACCTGACT
GATCTCTATCGATTTTTCATTTTGCTTGGGACTGTTGGGCCCTTTGTTTGCTATTTTAAG
ATCTTTAATGGGAAGCCCATCAACGTTCGCGGAAGCGGTCGCAGTTGGCGGCGTACGACG
TTCTGGTGTTTTGTCAACTGGTGTATAATTTCTGCCCTGACCTTGTACAAAGTTCTTGGC
GTGGACGTTGAACTGATGCGGGGTATGGTGGTGATGAGGAGGAGGCTGCAACGGTGGCGG
ATGGTGAGGAGTAGGTAAGTAAAGCGGCGGGACGTATTCCACGGCTCCTTCTACTGGTGG
CCCGTAAGGTGGAG
(3614 bp)

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