SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39656_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_activating_signal_cointegrator_1_complex_subunit_2_homolog_isoform_X4_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:18.89 TPM:14.92
ORF EntryO_BomoMG14155_complete:A_BomoMG_comp39656_c0_seq1
Sequence
(Nucleotide)
CAGCTTTTATATACGGCGTTCTAAATATAGTTGATGTAAACTAGATACAATTTTCGTTTA
TTCCGCATTACGTGCTCTTCATTCGTGGGCTGGAAGCCGTCGGTATCAGTGATCGGTGTC
ATTTGTTTGACCGCCAGTCTGTCATCGTATTGTTCATGAACTACAGTTCAAGGTTCAGAA
AAAGAGTCCGAAGCTGTCAGTCAGATTGCAGGTGAGTGTGAGCTCAGCGCGAACGTGGGC
GGGCGGACCGCACTCGCTTCAGTTTGAGACAGGCAACGACGCCGATCACACGAACCCCGC
CGCACAAGCGCTAAACGAACGACCTAGAGATGGCCACCGGCCCGAAGATAGTACACAAGC
AGTTCAACTCGCCCATCGGGTTGTACTCGCAGCAGAATATCAAGGAAACGCTCAACAAAC
ACCTGAAAAACCTCGACAACGGATCTGTCGGAATCGACTTCAACAACCCGACAACGGATA
AGCCAGCGAACTTAGCTAATTCCGCCGTCCTAAGAATGTTAGAAGAGGAAGAGCGTAACC
GCAAAGGATACAGTCAGAAGAAAGTGGTGTGGCCTCCAGTACCCGAAACGAACGGATATC
ATAATCCACAACAGCAGAGTCCCGTGTACGACAACAACGCGCAACACTCCCCGTCTGCTC
AGCCTCCCTATCAAAAGCAACCTCAATATCAACCCGAGCCCCAATATCAAGCTCAGCCTC
CGCACTTCCAACCCCAATACCAACAGCCACAGTCCCAGCAGCCTCAGTATCCCCAGTCTC
AGCCAGGGTTCTGTGAGGGACGTCGTCAAGAGCAAACTGGCCTGAGTAAGCTGATTCCCG
TTGGGCCGGGAGTGACTGCGTCACCTTTGTCTCCCTCGCAGTACCGTGTGGGTCCGGCGT
CCCCGGGCATCGCACCGCAACCCTTCAGGCCACAGCCAAATCGCTGGGCCCCCGTACCGG
CCCCCCTCTCCCCTCAGACACCCGGATCGCAGCCGAGCTACACGCAGCAGATTTCCCCTC
AATCTCAGTACTCATCGCAGTCTCCTTATTCGGAGCCCGCGTACCAGACCACACAGAGGC
ACTTCGAACCACCTCCATCAACCATCACTCTCCGTCCGCAACCTCCGGTTCACCAGAAAC
CATCCCCGGTGTTCGCTAGTCAACCGGCCGCTGCGTCATTTAAAGGAGGCGTCAACATGC
GTGGAGATCAGAAGTGGCCGCCTCAATCGGTGAAGGAGGCTGTGGCTGCAGAAAACGAAG
CCCGCCTCAAACTAGCCAAGGGTCCCGCCTGCAGACCGCGCAAGGTTAAAAAGGACTACA
GCTCGTTCTTCGCGAAGCATGCCCTGAGCCACAATTACCCCGGCTACCGCGCGCCACCAG
GCACCCAGCACTTCGAAGACTTCTCGGGCCGATCCTCATACTAAATCATCACTTCTAACA
CGCAATCTCGTTAGATCTAAACCACGTTTCACATTAAAAATTAACGAACCAAATTCTTGT
TGACATTATTACAACGATTTCTATTTACGGAACGCGGGTAAGACGGTGCCAACGGAAACG
GTTCCCTCTCATTACAAGAAACAAACATTTATCACATTTCGAGGTATCATCGGTCGAGAA
CCGGTAGCAGAGGTACTTGTATAGGCTTTAATGGATAAAGTCTTGAGGCACGTACGACAG
AATAATAATTGTAGTTTTAATTTAATTTATTTTAACCATTAATTAGCGTGTAAGTGATTA
TTTTAATGTCATAATAAAACGTAACAAATATATATATTTTAACGCTCATAAAATGTTTAG
CTATTTCATTGATCATTTTCATTACACATTATTATTTCGACATACTAAATGTTTATTATT
ATTTTTCGATGTTAAAGTGCGGCTTTTTTATAACGCGAATACGATTCAGCTTTTTAATGT
ATATAATGCTCAAATTGAAAATGAACGAAATGATTTGAAATTGAAATTTTTCAGTCAAGT
CGAATTTTGACTGCATTTTTTTTTTCATGTTTTGATTAAATTTATACGCTTCTGCTATTT
GGCTAAGCTTATCCGTTTACCTAGTCATGCGAGAGATTACGCAATTATTTTGTATATAAA
AAGCGAAAAAATTAATACAATTTGGTATTTTATTTTGTAATTATGTTCTCAATTAAATAA
ATGATGTAAAATGAAAAAAAA
(2181 bp)

- SilkBase 1999-2023 -