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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39621_c1_seq1
Scaffold_idBomo_Scaf381
NCBI non-redundant
(nr)		PREDICTED:_E3_SUMO-protein_ligase_RanBP2-like_[Amyelois_transitella]
Ontology
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0006457 P protein folding
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0008270 F zinc ion binding
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0033132 P negative regulation of glucokinase activity
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0046872 F metal ion binding
GO:0046907 P intracellular transport
GO:0051028 P mRNA transport
GO:0090526 P regulation of gluconeogenesis
GO:1990723 C cytoplasmic periphery of the nuclear pore complex
Transcript
Level		FPKM:3.76 TPM:2.97
ORF EntryO_BomoMG14025_internal:A_BomoMG_comp39621_c1_seq1
Sequence
(Nucleotide)
ATAATTCTAAAGATTTTTCAGTTAATACTAATTCAAGCTTTTTTGTAATGATGAAAAAAG
CTAAGCATTATTGTTACAAAGCCTTGGACAGGCTTAGACAAATTGAACCTGACAGAAACC
ACCCTTTGTATGTCAACATCCAGGATTTGATAGAAAACATTAAAACTTACTTAAACAGAG
CAGATCCTGATGTATCAATAAATGACAATTTTAAGGATGACTCTGATTCATCTGTTGACC
TTTTGCCAGTCCGAGCTACCGCACAACATACTCGTAATCTGAGTTCTACGCCTAAACCTA
AACCTAACCTAAACAACTCAAATATGACAAATTATCGAACAGCGGTTGATTCTCAATTCA
TGGACACTTCAAGAATTGATCATCAATTTTTAGAAAGAATAGAGACAGAAATCAGAAACT
TAAACAAGAGAGATGCTACAATTAATGATTTTATGCAACAAACAAGAATATGGTTTGATG
AGAATCGCAACTTAGGAAATCAAATAACTAACACTATTCACTCTAATGTCCAAATAACTA
CGGATCAAATAAAACTTCTAAAAATTTCAGTAGATCATGTAAAGGATCAAATAGACCAGT
GTAGAAATGAATGCAAAGATGTCGGTGAACTAAAAAAGCAAATTGCTGAATTAAAAATAG
AAGTAAACAAGTTAAAAAAACCAGCAGAAGCAAGTGATGAGAGTGATTTATACAATACAG
ATAAAGAATGCAGAAATAATGAGAACACACCAGGCTATGCTACACAACTACCTTATAGTC
CTGCTCAAGCTATGGCTTCATATAATCAGAGACTTGTTCCACCTTTTCCAGCACCACCTA
ATCCATACCATTTATATGGACAAAATTTTTATAACTTATACAATCACTACGCCCAAATAG
CTCAAACGTCAACACCTGGAACTGCTCCTATATTTGAACATGCCAGGTCCCAAATGGCGC
AATATCCAGGTGTATATCCAACACCAGAACAAATGTTTTTAGATATTGCACAACTTGTTC
CACCAGCTGTACCAGTACCCCCAGTTCCGACTGTCCCAGTGCCTTCAGCTCCGACTATCC
CAGTTGTACCAGCTACACCAATAACTACTGTTACAACAACAGCTAAATCAACAGTTCCGA
TTATTTCAACACAATCTTCAATATCCATCACATCTAAATTGGTAAATAAAACATCCAAAG
AGACAGCTAAATCGTTACCTGTCAATGTTGTGATAACATCTTCTGATCCATTACCTACAT
GTACTACAGCACCACCTCCTATACTGAGTGTCACTATTCCTCCTAAACATATAAAAAGCT
CCCCTCATAATTATCAAATTCCTATGCCATCTGTGGATGAAACAAAAACAGTGTCACCAT
CCGTTTTTAGTATTCCAAATTCAGGAATAACTGTGAGTTCATCGACAAATTGGAGTCAAT
CATCCATTTTTAAAACAACGCAGTCAATTCCTGTACTCAACAAGATGGGTGATATATCAT
TGATAAAGGATGCTGCTAAAACTGAAATTAATAATGCCAGTATTGATCCTTCACCAAATG
CTAGTCTTAATAAATCGAGAACAATATCAGAACGTAGCAATACATCTATTGAAAGCTATG
ATCCATGTCCAGACTTCAAGCCGATAGTACCATTACCTGCCGAAATAAAAGTGAAAACCG
GAGAAGAAGATGAATTTACAATTTTTTCTTCAAGGGCTAAATTGTTTAGGTTTGTAGACA
TGCAATGGAAAGAAAGGGGCCTCGGCGAAATTAAATTATTAAAACATAAAATTACTGGAA
AAGTAAGAGTTTTGATGAGACGTGAACAAGTTCACAAGATTTGTGCTAATCATGTAATTA
CTTCTGAAATGGAAATTTCACCAATGAAAAATGAAACAAAGGCCTATTTTTGGGTCGCCA
ACGATTTTGCAGATGAAGCAGTGGTACTTGAAATGTTTTGCATACGTTTCAAGACTTCTG
ATATAGCACAGGAATTTTATAGAAATTTTGAAAAAGCACGCTTAGAAGCAGCTAATTCAA
AGACTGTTGAAATCCACACTGACAAACATGATTTAAAAAATACTACCAAGGCATCTACCC
CTAGTGACGTTTCTTCCAAATCTGAAGACCATCCTAAATCTACTCCTGGTAAATCTGTGC
TTGGAGGATTCACTTTTAGTAGTACACCAAACATAAAACCAATTAAGGATGAAAAAGAAG
TCTGTTCTAAACCAACTGAAACAACTGTAGGTAAATCCAACCCATTTACTGACTTTTCTT
TGAAATCTATGTCAAGTTCACCATTTTCCAATTTGTCAACTGTGAATACGAATATATTTA
GTAAATATACTACACCTCCACAAG
(2364 bp)

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