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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39612_c0_seq2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_protein_SMG5_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0032210 P regulation of telomere maintenance via telomerase
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:7.64 TPM:6.03
ORF EntryO_BomoMG14010_complete:A_BomoMG_comp39612_c0_seq2
Sequence
(Nucleotide)
AAAATGCATAGACCTATATAGTTCATTGGGAAAATGATAATAACGAAATGTTTTTCGTTG
GCATATTTAATAAAGTAACACATTGAAGTTAAAGGAACTTTCTTTTTTAAATCAACATTT
TGGTCAGACGATAAAATGACTTGAAAATGAAGAACGGATGTCTCGATTTATCAGAGGCCA
AAATTGCGGAGCGCAATGAACGTGCCAAGAAACTTTATCGCTATTTAAGTGATGTAGCAA
GACGTATCAATGACATGTCGACTACAAGTAAATTTGTGGCAGACCTCTTTACTACTAACA
TTGAAGTCCAGAGACAAAAGCTGAGGGACAATTGTGAGAAGTTACTGTTTCTAGATCCAA
TTAATTACGGCAAGAAAGCACTTGAACTACTATGGAGAAAAGTATATTATGACACTATAT
CTACTGCCAAAAAGTTGAGAACTGATAGTGAGCATGACCATTTCCTGTTCACCCTCATCC
AATGTGGAATTGGTAATTTTCACCATTTCTTAGATAGAATTCATTATGAAATGAAAGTAG
ATTTCAAGGAGTTAGATTATATGCCCAATACTGAAGAAGATGAGTTGCAACTATCTTCTG
GTAATGTTGAACTATCAAATTTTGGAAAATCTGCTTTGCACTCATGTTTGATATATTTAG
GGGATTTAAGTCGTTATGCAGTGGAAATATCAAATCACTTTGAACCAACAATTGCTGCTC
GATACTACTTACAAGCTGCTCATACTGACTTTACATTGGGAATGCCTTATAATCAATTAG
GAAACCTTTATCTTGAAAAAAATTACAACTTGGATTCTGTATGTTTTTATATTCACTGTC
TTAATTCTAAAAATCCATTTGAAGGGGCCATGGGTAATCTTACAAAAATATTTGAGAAAA
ATGATCAGTTTTACCATACAATAAATGAATCAGATACTTTAACTCAGGTTGAACATATAC
AAAATACAATTGTGAATTTTCTTTCATTAATTGAGATATGGTACTTGAACAAATCTGATT
CTGATATTCCTCAGCGCTGCAGCAAAATCGCACAGCAGCTAAAGATTTGTATGGAGTTTA
ATGAAGCCACACTTCCTGATATTGATAAAAATTATGATGATTATCTATCAATTTTGGAAC
ATGAAACCAATTTTCCATCTTATTTAAATCCAAATCTAATACATCGTATGGTTCTGATTT
GTTTATTCACAGTCTCAAAAATGACAGAAATTGATGAAACAAAAGCCTTTGCATGCAAAG
CTTTCACTCTTGCTCTTTTGTCTCAACTTTTGTTGAAATTGCTTAAGCAATTGGATTCAA
TTGGTTTTGTAAATCCTAGGCAGATTCATAATTATGGATCTTCAAAACCACACAATGAAC
AAACAGAAAAATATGAGAACAATAATGATGAAAATAAAGAAATTATAGAAAGCACAGTGA
ACAATGGCCAGAATGCAGAACAAGAATTGGAGGAGCAGAAACAAAATAATGTAAAAGAAA
ACAATCTAAATGGTCATGCTAAGCATGCAAAGAAAGCACTTATGAAACGTCGTCGCCGTC
GACGCATTGCCTCTTCAGAAAGTTCTGACGTGAGTGATGCTAATACTGAAAGCAGTGATT
TAGATGAAATTGAACATTCATACAGCGACTTGTCAGATTCCTCTGATCAATCTGTATCAC
TTAGTGAAGCTAGCGATTGTGATGAAGTTAACGATGAAACTAAAGATGAAAGTAGTGAAC
AAATTAATGAAAAAGTAGAACCAAATAAAATATTGAATGATGATATCACCTCAAAGATTA
CAGAAACAAATTCACTTAATTCATCAAATTTATTGAATTGTAATACAACAAAATCTCAGG
AAAACAGCAAAGTAAACACTATAGAATTGAAAACTTTTTTACAAGGAAACAATTTCATGG
CCAGTATCAAGCTGTTGTTGGATTGGATTTTGATTGAAAAAGATTTAATTCTTTCATGTG
GAGACAGCGGAGAGTCCTTGTTTCAATGCGTTGTAGATTTGTTAAATATTTTTACATTTT
ATTTCAATACAAAATCTGATGAGGGGACTAAAGAAGATTGTGAATTAATAAAGTACATTA
GAAATTTAGTCATGAAAATGAAACTTGAATACAAGACAATACCCTTACCTGAAGATATAA
ATTTACGGGGAACAAACATTTGTAAATTTGATAAAGATGCTGCTGAATGGCACATCTTAG
AAAAGTATAAATTATCTGTTTATGAAGAAAACGTAATAAGGATTCTTAACTTCATAGATT
TTGGGAACCAGATAGCTAAAATTATACCCAGAATAAGATTTAACAGGACCATGAAATTGT
TTTATCTAAAAAACATTCACCCTCCTAAATTGAATACCAAAATTAACCATAAAAGAAGTA
GAGAATGGCATTCAAAGAAAAATACTGAATCGAATGAAAGTGGATTACTACGGCGCCTTG
GTCGACTATGGTTGACATCACAAGTACGCGAGTTGGAACGCAGCGGACAGTCGGCGGCAC
CTGCATTACTCGTACTTGACACCGCAGCTCTTAACAAACACCTCCGTCGTGTCAAACAGC
TCCTACTCACAACCAACTTTGTGCTCATGGTGCCTACAGTTGTGCTACAAGAACTGGACA
ATTTGAAGCGAGAGCAGAGCACAGCACGTAAAGCTATCCGTTGGTTGGAACTTCAATTAA
AAAATGGCTCAAGATTTCTACGAGCACAACGTCCGAACCAGTCAAAGCCCCTGCCGCTCT
TGAAATATCCCCGTAAAGCTCCAGCCCATATTAATAACTTTATTCAGATTTTAGAGTTCT
GCAATCATTTCGTAGCGGAAGATAAAAAGACGCAAGGATCCGGTGATGCTGAAAACGTTT
TACAAGGGAAGTCTTCGTCCGTCCTTATACTACTCGTTGGCAATGCTGATGAAGATGAAG
AACAGTATAAAGAATTTAGTGTTATGGGCGCAGCGCAATCGGCCGGCATTTCCGTAGAAA
ACATCGTAGATTTCTACAGCAAATGGCGACAGACATCGCATAAAAACGGTAAAAAGAGGT
GAACGCGTGTCGATCACGAGACCGGTTTTGATCACTATGGAAAGAATGGACTTCGAGGAT
ATCGATAAAACGTCAAAAAGCTCTTGCGAGGTTTTGATAGGACACGTCCAAAACGCTCAC
TATACACTATACAAAAAAAAAAAAACTAATAATGTTTTCATTGAAGGTAGCGCGGAAAAT
TTTCTATTGATGTATTGTATCAATAATAAATTTTTATATATCGGTGTAACATTATATAAC
CATCCATAAATTCATAATTCATAATGTATTCATATAGCATACGATTGGGAAAATTATCAT
TTTTAGTTCACATTGATTACAAACTACTCAACCGTTTCATTGCCTGTGTGCTACAACACC
ATTCAAATTAATTTCTCATTAGAATAAAT
(3449 bp)

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