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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39609_c1_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_AP-1_complex_subunit_sigma-2_isoform_X2_[Plutella_xylostella]
Ontology
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030117 C membrane coat
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032588 C trans-Golgi network membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0050690 P regulation of defense response to virus by virus
Transcript
Level		FPKM:7.37 TPM:5.83
ORF EntryO_BomoMG14003_complete:A_BomoMG_comp39609_c1_seq1
Sequence
(Nucleotide)
GCCCCGTGAGCTCACCTACACGTCGAGGAGAAGCTGAAATAGCCTCTCAGCATAGGTAGG
GGGAAAAAAGACAACACTTTCTTTAGTCGTCGGTGTTTGTACAAAAAATGAAAAGTATTC
AAAACGTTTGAAGTAATTTAATGAAAATAAATAGACTATAAAATTAGTTTTATCGACTCG
CAATTTGCCCATGGACTTCGCCAATGCTAGTACCAACACGTGGCTAACCTCTTTACATCA
ATACACTATGAAGACGTAACCAGTGCTGTACATAAGGTTTGGCTTTGGGTACTTGATCCA
CATGTGTGAACCCAAACCCGGATTGGGGTTCTATGCGTAAATAGCTTTGGTTTGTATATG
AGTATGAGTCGTTATCTTAAACGAAAATTAATTATCTATGTAAATACTTGTATTTATTTG
GTTCCAAACAATGACATTGTGGAAAATTGTTTATGTAATATTACTGTTTCTTTTATTTCT
TTAATGTATTAGAATGTACTGCTTTAGCCAAATCTTCATGTAATATTATTCAATGCTTTC
TTATATGAAATGTAACTTGTAGCACGATTTATCTGGGATATAGGGAGAAAGCTAGATTGA
AATAATGTCCCAGTCACTTATAAGATTTTAGTGACCCTTTTTTTCGAGGACTTTTGAAAG
AACGCGAGAAGTCACGTCACTTTATTTCGTTTTCCTCTCAGTTCTTCAATTTCGCAGATT
CTAAACGATTAATAATCTAACATTATTCCGCATTTAGAACTGAAGAAAAATAAAACACAC
GCACACAATCCGTCTGCTCGCGTTCCCGTGAAAATGTCGATTGTTCTTTTTGTTTTTGTT
TGGCACCCATGTAATAATATCCTTTCGGTTTTTAACATTTTTAATGTGAAAGTATGTTTT
TAAATCTTCTATACATTACTAAAACATATTATTTTATTGCTCACATACTGTGACAGCCCT
AAACTATAACATGCATACTATTTTCTACAAGAAATTAGGTCCATTGTTTAAGCATTGAAT
TTTATGTACTTTAAAAAACAACACACTTATAAATACAAGTTAAGTTTAAGACCGTTAAGT
TATCACGAATTGTTTTTTTTTTCTTTTCATGGAATGTTATTAAAATTTAAACACATTAGC
GTGCGTCATCGATACGGCTGCTTAATGTATGAGCAACAATAAAAAAAACACAATAGAGCT
GCCACTGTTACAATTAATGAGATACTAAGATTATTAATACTATATAGCAAGTGAATTTGC
TGAGTTGCCGGAACGAAGGACAGATGGCGCGGCGGCTTATCCGAGGCCGTGGTCTTCGAA
GAAGCCCTGCGGTGTCTCCTCCTCCTGCAGAAGATCCTGGGCAGCGATGGCTTTCAGGAC
ATTCTTCTTACTGGTTTCTTGTAGCTCTCCACCAAGAACCAGTTCATCAAGTATGAAGTA
TGCTTTCTCAAAGTTAAAGATGATGTCCAGTTCACAAACACTGCCAAAATACTTGTCCAG
CAGTTCTACATAGCGATGGATCAACTCCAAGGTCAGCAGCTCATTGTCTTCTTGTTCCAT
AGCACAGCAGAAATATAGTGATGCATATCTTTTATACACAACTTTAACATCTTTCCATTC
AAGGAAAGAACACATTTTGGGTTTTCGAGCTAGCACTGTGGTAATCAATTCTCTAGTTAT
TTTCTTCTTTAGCTTATCTGGATGAGCCACGTACCACTTCTGAAGCCTCAATTTGCCTTG
ACGGCTAAATAATAGCATAAACTGCATCATCTTGACTCCTGATTTTTCCTGTTATGTCTG
TTACAGAAATTGGAATGTATTATTTTAATTTATTTGCAATACTTTATTACATTTTACTGA
GACCAACGTTTTAGTGCAATTTAG
(1884 bp)

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