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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39552_c0_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_DHX8_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:4.85 TPM:3.84
ORF EntryO_BomoMG13804_internal:A_BomoMG_comp39552_c0_seq2
Sequence
(Nucleotide)
GTTAGAATTTGTTAGATTTGATGGTTTTAAAGTGAAGCTAATACTTAAAATGGACGAAGT
CACTAAATTAGAGCATCTTTCGCTCGTGTCTAAAATATGCACCGAGCTAGACAACCATTT
AGGTTTGAACGACAAGGATTTAGCGGAATTCATCATAGATTTGGCTGATAAGAATCCAAC
ATTTGAAACTTTTAAAGTAGCATTGGTTGAAAATGGGGCTGAATTTTCTGATTCCTTCAT
GACAAATCTACTCCGTATAATACAGCACATGAAACCTGTGAATACATCAACATTGATTAA
AAATATTGCCGAAACTGAAAGTGAAAATCCTTTGGCAAAAAAGTTTCCTGGCTTGGCCAT
ACCAAATGATAAACCTCAATCTTTTTCTGATGAAAGTAGTGATGATGAAAAAGACAAAAA
GAGAATAACAGCCAAAGACTTATTTACAGAAGAAATTAAACCAAGTTCTACTGATAATGT
TGTTGATTTGGCGATGGCTGAATTGGAAGCTTTAGCACCTTCCAATTCTACAACAAATGA
ACTTCTTATAGGAAAAGAACCCCTAAAAATTGAGAGTAGTAGAAATAGTGATCACAAAGA
AAAGAATAAATCAGAAGAATCTAGAGATAAAGAGAGTAGGAGTCGAAATCCTAAAAGAAG
CAGAAGTAGGGAACGTAAAAGAAGCAGAAGTACACAGAACACAGATAAATATAAACTAGA
AGAATCTCGAGATAGAAAAAGGCATAGTAGAAGTCGAGATCGTAAAAGAAGTAGGAGCCG
AGATAGAAAAAGAAGTAGGAGCCGAGATCGTAGAAGAAGTAGGAGTAGAGATTATAAAAG
AAGTAGAAGTAGGGAACGTAAAAGAAGTAGAAGTAAAGGTAAGAGAAGTCGTAGCCGGGA
TAGGAGAAGCAAAAGTCAAGACAGAGACCGTAGAAGAAGATCACACAGTCGACATCGTCA
CAGATCCAGGTCTAGGGACAGGCGTAGATCTTACTCGAAAAGTAGAAGATCAGTATCAGG
TGGCAGAAGATCTCGTTCAAGAAATAGAGAAGAAAAATTTGATTATGGCAAGAAAAGCAG
AAAACGCAGCCCTGAAGTAGAATTGAACGATGATCCTGAACCAGGAAAAATATACAGTGG
CCGCGTTGCAAACATTGTACCATTCGGCTGTTTTGTTCAAATTGAAGGAGTCAGAAAAAG
GTGGGAAGGATTGGTGCATATCTCACAGCTGCGAGCTGAGGGTCGTGTCACCAATGTATC
TGATGTTGTCAATAGAGGTGATAAAGTTAAGGTCAAAGTAATCTCAATAACAGGACAGAA
AGTTTCTCTCACAATGAAGGATGTTTGTCAAGAGACCGGGAAGGATCTCAATCCAGCATC
CCATGCTCACCTGGAAGCAGAACGTGAAGGCCGAAACCCTGATCGCCCTCCACCAGCAGC
AACTGTGTTAGCCGGACTCCAAGGTGGAATAGACCCTGATGAGGATTCTAGTAGGAAGAG
GGTGACAAGGATATCCAGTCCTGAGAGATGGGAGATCAAACAGATGATTTCATCAGGCGT
AATTGATAAGAGTGAATTACCAGATTTTGATGAGGAGACTGGTTTACTTCCAAAAGATGA
AGATGGCGAGGCAGACATTGAAATAGAGCTAGTAGAAGAAGAACCTCCTTTCCTCCAAGG
TCATGGCAGAGCCCTTCACGATCTTTCTCCAGTAAGGATAGTTAAGAATCCCGATGGCTC
CCTTGCACAAGCAGCCATGATGCAGTCCGCATTGGCCAAAGAGAGGAGAGAGCAGAAGAT
GATCCAACGGGAGCAGGAAATGGACAGCGTACCTACTGGTCTAAATAAAAATTGGATAGA
TCCGCTACCTGAGTCCGAGGGTCGAACGTTAGCGGCCAACATGCGAGGCGCGGGCGTGGT
CCCTCAAGACTTGCCAGAATGGAAGAAACACGTCATCGGTGGAAAAAAATCCTCATTTGG
AAAGAAAACGAATTTATCCCTGCTCGAGCAGAGACAGTCGCTGCCCATATACAAGCTTAG
AGATGAACTAACTAAGGCCGTGTCCGACAACCAGATCCTGATCGTGATCGGCGAGACGGG
GTCGGGCAAGACGACGCAGATAACGCAGTACGTGTGCGAGTGCGGGCTGGCGGCGCGCGG
CAAGGTGGCGTGCACGCAGCCGCGCCGCGTGGCCGCCATGTCCGTCGCCAAGCGCGTTGC
CGAGGAGTTCGGCTGCCGGCTGGGCCAGGAGGTGGGCTACACCATACGCTTCGAGGACTG
CACCAGCCCGGACACTGTCATCAAATACATGACGGACGGCATGCTGCTCCGCGAGTGCCT
CATGGACCTGGACCTGAAGGCGTACTCGGTGATCATGCTGGACGAGGCGCACGAGCGCAC
CATCCACACCGACGTGCTGTTCGGTCTGCTGAAGCAGGCCGTGCAGAAGCGCCCCGAACT
CAAGCTCATCGTCACGTCCGCCACGCTCGACGCCGTCAAGTTCTCGCAGTACTTCTTCGA
GGCCCCGATCTTCACCATCCCCGGTCGAACCTTCCCCGTCGAAGTCTTGTACACCAAGGA
ACCGGAGACGGACTATTTGGACGCCTCACTGATCACGGTCATGCAGATCCACCTGAGGGA
GCCCCCGGGGGATATCCTGCTGTTCCTCACTGGCCAAGAAGAGATTGACACGGCGTGTGA
GATATTGTACGAGAGAATGAAGTCCTTGGGGCCGGACGTGCCGGAGCTGATAATTCTGCC
GGTGTACTCTGCGCTGCCGTCCGAGATGCAGACCCGGATCTTCGAGCCGGCGCCCCCCGG
CTCCAGGAAGGTGGTGATCGCCACCAACATCGCGGAGACGTCGCTGACCATCGACGGTAT
ATACTACGTGGTGGACCCTGGCTTCGTTAAACAGAAAGTCTACAACTCGAAGACTGGAAT
GGATTCGTTGGTTGTAACTCCTATATCGCAGGCGGCGGCGAAGCAGCGCGCCGGGCGGGC
GGGCCGCACCGGGCCGGGCAAGTGCTACCGGCTGTACACGGAGCGAGCCTACCGGGACGA
GATGCTGCCCACGCCCGTGCCCGAGATACAGCGGACCAACCTCGCCACCACCGTATTACA
ATTGAAAACAATGGGTATAAACGATTTGCTGCATTTCGACTTCATGGACGCGCCGCCGGT
CGAGTCGCTCATCATGGCGCTGGAGCAGCTGCACTCGCTGTCGGCGCTCGACTCTGAGGG
ACTCCTGACGAGGCTGGGACGCAGAATGGCCGAATTTCCACTAGAGCCAAACCTATCGAA
GATCCTAATCATGTCGGTGGCCCTGCAGTGCTCGGATGAAATACTCACAATAGTGTCGAT
GCTGAGCGTCCAAAACGTTTTCTATCGGCCGAAGGACAAGCAGGCGCTTGCCGACCAGAA
GAAGGCCAAGTTCAACCAGCCGGAAGGGGACCACCTGACGCTACTGGCCGTGTACAA
(3477 bp)

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