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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39551_c0_seq3
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase-associated_protein_Rtf1_[Papilio_xuthus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001711 P endodermal cell fate commitment
GO:0001832 P blastocyst growth
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016055 P Wnt signaling pathway
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0019827 P stem cell population maintenance
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
Transcript
Level		FPKM:3.90 TPM:3.08
ORF EntryO_BomoMG13800_internal:A_BomoMG_comp39551_c0_seq3
Sequence
(Nucleotide)
GTAGAAGGAAAACCAAGCAGACGCATTTTACGGCCGTTTTAGTGTTGAATTCATTCAAAA
TGGCCAAAAGAAAGAATAAACCGTTGATCGATTCTGATTCAAGCAGCGAATGCTCAGATT
TGGAGTCACAACTGCTAAATCTCGCGAAAAAGAAGAAGAAAACAGATGTTCAACCCCCAC
CTAAGCCAAGGAGCAGATCCTCAGGGAAGTCATCCGACAGTGATTCAGATGATGATAATG
ACGAAAAACCTAATCACTCTAAGTCATCAGCATCATCGTCTGATTCTGATTCAGACAGTG
ACGCCAAAAGCAATGCATCCAAGAGCAGAGACTCGCCTCCGAAGCGGGCTTCCTCAGATG
AAGAGTCGAAGGAGACAGAGCCAAAGAGATCTGAAACCAGGAAGAGCATTGAAAGTGCTG
GATCGGAGAAGAAAAAAGATACCTTCAGTGAGCCAGAGGAAGGTGAAGTATCTTCACATT
CGTCAGACAATGACTCAGTTGACTCTGAAGAGGAATTTGATGATGGGTATGATGAAAATT
TAATGGGTGATGAAGAGGATAGAGCTCGTCTGGCTGCCATGTCAGAGAAAGAGAGAGAAC
AAGAGATTTTCAAACGTATAGAGAGAAGAGATTTAATGAAAACTAGATGGGAGATAGAAC
GTAAGCTACGCTTAGCGAGACGTTCTGCGGCTGAACGATCTGCATCTCCGGGAGAAATAG
CTAGAAGGAGAGAGGCCAGGAAACGGA
(747 bp)

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