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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39536_c1_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:8.08 TPM:6.39
ORF EntryO_BomoMG13753_3prime_partial:A_BomoMG_comp39536_c1_seq3
Sequence
(Nucleotide)
AAAGAATTAAAATCTGTGTTAATTTTTGCTGCGTAGTAATAATTTACAGTCTTAAAAACA
TATTTTTCATCTAGGGTGCAGCGGTAGTTACGAGAAAGATCGATGAATAAAATCAATTAA
TTTCGAGTGGTGATCCATACCACTAAACTGTAAAGATGGCAGAAGTGGATCCAGAGACAT
TACTGGAGTGGCTGCTGACTGGGCAGGGTGATGAACGTGATATGCAACTCATTGCTCTTG
AACAGCTGTGTATGCTTCTACTAATGTCTGATAATGTTGACAGGTGTTTTGAAAGCTGTC
CACCAAGAACATTTCTTCCAGCTTTGTGCAAGATTTTTTTGGATGAATGTGCACCTGATA
ATGTTTTAGAAGTTACTGCAAGAGCTATCACATATTATCTGGACGTGTCTGCTGAGTGTA
CAAGGCGCATTGTAGCAATTGAGGGAGCTGTGAAGGCTATATGCAACAGACTGTTGACAG
TTGACCCCAATAATCGGACAAGTAAAGATCTAGCAGAGCAATGTATAAAGGTCTTGGAAC
TTGTTTGCACTCGAGAAGCCGGTGCTGTATGGGAAGGTGGTGGTTTACCTGCTGTTTTGC
ATTTTATTACAAACCATGGTACCTCAGTGCATAAGGATACACTACATTCAGCCATGGCTG
TGGTTTCCAGGGTGTGCGGTAAGATGGAGCCCGGTGACGCTCGCGTAGGTGACGCGGTGT
CGTCGTTGTCAATGCTCCTGCGTCACAGCGACGCGCGGGTGGCGGACGCAGCGCTGCGCT
GCTTCGCCTCGCTCGCCGACAGGTTTGCACGCGCCCATGCCGACCCGGCGCCGTTGGCTG
AACACGGCCTAATTGAAGAATTAGTACGACGTTTGGGAAGCACAGAGAGTGGAGATGATA
AATGTCTCACTTCAGCCGTATCCACTACAGTCAGTCTCCTTTCGACGCTATGTCGCGGAT
CGGCGCAGATCACCCATGATTTAGTTCGTTTGGAATTATGTTCAGCCATTGAAAAGGCAG
TTCAAGCAGATGAGCGTTGGTGCTTAGAATGTATGCGATTGGTCGACTTGTTACTAGTAC
TGCTCTGTGAAGGAAGGCACGCCATAGCAACGGGTGCGAACCGTAATGTCGGTTCATCAT
CGGGCGCGCGGTCCACGGAGGCGAGTCGCGGCGGAGAGCGCTCGCACCGGCAGCTCATCG
ACTGCATCCGCGGGAAGGACACGGACGCGCTGCTGTCGGCCGTGTCCAGCGGCGCCGTGG
ATGTTAACTTCACCGACGACGTCGGCCAGACGCTGCTCAACTGGGCCGCCGCCTTCGGCA
CCAAGGAGATGGTCGAGTTCCTGTGTGAGAAAGGAGCGGACGTAAATCGAGGACAGCGTA
GTTCATCCCTTCATTATGCGGCTTGTTTTGGTCGTCCCGCGATTGCCAAGGTACTGCTTC
GGTATGGCGCCAATGCGGATTTGCGTGACGAGGACGGTAAAACCCCATTAGACAAAGCGA
GAGAGCGACACGATCAAGGGCACAGGGAAGTGGCAGCAATATTGCAATGTCCCGGAGAGT
GGTTGGTTGTCGGCAACAGCGAGTCCCCGTCTCCGTCGACTGATGATGACTTTCCAGAGA
CGGGCGACAAAGAAATGGCTGAGTTTTACCTAGAACGGCTGGTGCCGCTGTTCTGCGCGC
GGTACGTGGGCGCGGGCGGCGGCGGCGTGCGGCGCGCCTGCCTGTCGCTGGTGCGCAAGA
TGGTGCACTACGCGCCGCCGCGCCTGCTGCGGGACGCGCACCCCGCCGCGCTGCTCACCA
ACCTCGTCGCCGCCGTGCTCGACAACCAGGATGACGACGATGGACATTTGACAGTTTTGG
GCATATCCGAAGAGTTGATGGCCAAGGCCGCCGACGTGTACTTGGAACAGTTCGCTCGGC
TCGGCGTCTTCAGCAAAGTCGAAGCACTCGCCATCACACCCATTCAGTACGACAGCGATG
GCAGCTCGACTCCAGAGCTGAGCGGCGAGGACGCGTCGTGCTTGTCGAGCGGCGTCGCGT
ACTCGTGGGGCGAGTGGTCGCTGTGCCGCGGCCGCGACGCGCTGTACGCGTGGAGTGACG
CCGCCGCGCTCGAGCTCAGCACCGGCAGCAACGGCTGGTTCCGCTTCCTACTCGACGGCA
AGCTGGCCACCATGTACTCCAGCGGCAGTCCCGAGCACCAGACCGACAACACTGAAAATC
GCGGAGAGTTCATTGAAAAACTACAAAAGGCAAAAGCTTCGGTGAGAAACTTTATCCCGC
AGCCGATCCTGTCGAAACCCGGTCCCAATAAACTAGTTCTCGGGAATTGGTCCTTAACAT
GTGAAAAGGAAAAGGAGCTGCATATATACAATATAGATGGGCAGCAACAGACCACAATAT
TGAAAGAGGATTTGCCGGGATTTATTTTTGAATCAAATAGAGGAACCAAACATACATTTA
CTGCAGAAACATTTTTAGGTCCTGACATCGCCAGTGGCTGGGCTGACAGAAGGTCATTGC
TTACCAATAATTCAACACCAACAAAACCTCGTTCTCGAATATCAGCAAAAACCGAAGCTC
TTAAAGCACAAGTATGTGAGCGAGCGCGTGCGCTGTACTCGCGGCACCTCGCGAGCGCAG
TGACGCGCCAGCCGCGCCCGCCCGTCGCCCGCCTGCGCGCGCTGCTCGCCAGGATGCAAC
GCATCGCCACCCAGCCTTCCAAAGATTGGCAACGAGAGCTCAACGAATCGCTGGATCAGC
TGACCGAGTTGCTGTGTGGAGATGAGCATCTGTCTGCGTATGAGTTACAGTCGTCTGGGT
TAGCGCCTGCTCTACTACAGGTCCTCTCCCCACAGGTTAACGACGGTCCGGGCCACCTGT
CGGAGCGCAGCCGCGTTGTGAGCGCGTGGATGTGCCGGGCGTCGGGCGCGGCTGGCGCGG
CGCTGGCCGAGCGGCTGGTGGCCGTGCTGGAGTCAGTGGAGCGGCTGCCGGTGCTCGCGC
CGCACGACGCGCCGCCCGCCCCCGCCTCTGCCTTGCACCACCTCACTAAGCGCATACGCT
TGCGCGTCGAACGTGAAAGTGATGAAATCAGCGAAGACAGCAATGCTAATAATAACAGCG
GCCGTAACCTGAAAGTGGAAGCCCTCACTACCGTCCGTCAGCTAGAACGGTTCTTGGCCA
AGTCCGTAGCGCGGCAGTGGTACGACATGGAGCGGTCCACCTTCCTCTTCGTGCAAAAAA
TAAAAACTGAAGCTCCTTTAAGCTTCACCTACGACCACGATTTCGATGAAAACGGCGTTC
TGTACTTCATCGGAACCAATGCTGGCACTTGTGAGTGGGTGAACCCTGGCGCTCACGGGC
TAGTCTACGTGTGGTCATCAGACGGTAAACAGTTACCGTATGGACGACCCGAAGATGTGC
TG
(3422 bp)

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