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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39524_c0_seq2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_chondroitin_sulfate_synthase_2_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
Transcript
Level		FPKM:18.54 TPM:14.65
ORF EntryO_BomoMG13721_3prime_partial:A_BomoMG_comp39524_c0_seq2
Sequence
(Nucleotide)
AGGACAGCGAGTTTCTATTTCTCAACCTATGATTATCAGCAATATATCTTTTGGTTTTAA
TGTAAAAATTATCTATGAAATCAGTTGATAAACTTCGCAAAAGCGTCGAGACGCTATAAA
TGTCTTCTAACATCCATTAAAAATACAGTAACCAGTAAAATGTTCTCGCGATGCCTGGTG
TCTCAAGTAAAACATAACTCGTACTTTTTAATAGGCCTATTAATCGGTTTGTGGGTGTCT
CTCGCTGTTATACCGTTGGATGAAGAGCCGGCGCCTTGTGTAGCGACTGTAGGCAGTGCC
TCTCCAGTTCAGGATGAATTTGTGCCGCAGCGGGAGGAAAAACCAGCTGGTTCAGGACAG
ACGGCTGGGAGAAGCGTGCAACGACCTCGTTATTACAGTACTGAGCTGGGCATGAGAGGT
TCCCTTCTCACTGGAATCCTGAGCTCGGAAGAAGCCCTCAAAGTCCAAGTGCCAGCTCTG
AACCGAACAGCAGCAAGACTGCAGCCAGCCTTAAAATTCTTCATTACCGCCAGTGCAATG
AGCACTGTACCTGGGCTAGCTAATGTTGTTGGCTTCACAGATACTAGGGAAATGCTAAAA
CCATTTCATGCCTTGAAGTACTTAGCAGATAATTATTTAGAGGAGTACGATTTCTTCTTC
ATTGTATCCGACACAGCCTTTGTGAATGCAAGACGGTTGACCCAGCTGGTCTCTCAGTTG
TCTGTCAGCCAAGATGTGTACATGGGGAGGGTAGCTGATGATGAAAGTCATTATTGTTCT
TTAGACAATGGAATAATCCTTTCTAACTCTGTGCTCCGCGCTATCCACAGTGAACTCGAC
TGGTGTGTACGCAATTCATATTCTCCTCACCACTACGAGAATATAGGTCGTTGTGTGTTA
CACTCTGCTCATTTGTCTTGCAACCCTGACGTACAGGGTGAACACTACTCATCAGTAGTT
ATCGAAAATGATCAACTACCATTAACTGAGTCTTTGGCTGATGCTGTAACAGTGTATCCC
ATCATGGACACTCACAGGTTCTACGAGATACACGCTTACATATCACGGGTGTTTTTGGAA
CGCGACCACGAGGAGGTGCTGAAACTACGCAGCTACATGTGGCACAACTCCGCGCGCCAC
CCCCCCGGGTACAGGAACAGCACGTGGCCCGCCGGCCTCAGGGACGATCCCGGACTGGCC
AGACCTTTACCGGGGAACAGGTTCGACCACCTCCGCTGGACGGCAATTAACGGGACCCAC
GCGTTCTTTCCTGACGACCACCACAATGTATTACCGATCACCGGAGCTTACAGAGAAGCC
TTGGATCTGGTGCTCACCCAAGTGAGGGCGTGGTCGCTGCACCGCTGGCCCGAGGCGCTG
GACGTGCAGCTGGTGGAGGGGGCCTGGAAGTGGGAGCCGGCCGTCGCGCTGCGGTACCGC
CTCCTGCTCCGCCTCACCGCCAAGGAGGACAAGGACACGCACATGAGCAGGCTGGTGGAG
GCGGTGCGTCCGCTGGGCGCGGCGCGGCTGGTGCCGGTGCGCTACGTGACGGAGAGCGCG
CGGCTCAGCGCCGTGCTGGCGGCGCCGCACACCGCGCGCCACGCCGCCGACCTCGCCGCC
TTCCTGCAGCGGTACGAGGCGGTCTGCCTTAACCAGGACAAGAACACCGCGCTCCTGCTG
GTGATAGTGAAGCAGCCTTCCCAGCCTTCCGTCGGCAACACCACTGAGGTGGACCTCATG
AAGGAGAACAAGGAGACGGTGGCCGCGCTGAAGTCCCGGCACAAGGACGCCCAGATCGAG
GTGGTCGAGACGAGCCTGGAGTCTCCCAGCCACGAGCACGCCAGCGAGGTGGAGCTGCTG
CAGGAGGCGCAGCGGGCCGCGCTCGCCCTCGCCCTGCAGCGGGTACCCCGGGACAGCCTG
GTGCTCCTCGCCGTGCCGCACATCGACTTCAACCAAGACTTCTTGAATCGGGTCCGCATG
AACACGATATCCGGCGAGCAGTGGTACCTGCCCAGCGCGTTCTCCCGCTACGCGCAGTAC
GAGCACCCCGCCTTCGTGACGCCCACCGGCGCCAAGCCGCAGTCCAACACCGGCCGCTTC
AACGTGCACCTCAGCCTCGTCTCCTCCTTCTACAGGAGCGACTACGACTCGGCGGTGGCG
GAGTGGCCCGGGCCGGGGGGGGCGGACCCCGCGGCGGTGCTGGTCCGCAGCGGGCTGCGC
T
(2221 bp)

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