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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39502_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		cryptochrome_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0009881 F photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0042622 C photoreceptor outer segment membrane
GO:0048511 P rhythmic process
GO:0050896 P response to stimulus
GO:0097381 C photoreceptor disc membrane
Transcript
Level		FPKM:6.25 TPM:4.94
ORF EntryO_BomoMG13619_complete:A_BomoMG_comp39502_c0_seq2
Sequence
(Nucleotide)
AGACTGTGTCGTCGTAATTTATTCTAAATGTTCTAGAAGGTGCAGTTTTCACATTATGCT
CAATTACTAAATTTTTTAAACTTAATTGAAATTATTTAATATTTAATTTTCAATCAAGAT
TCGGATGTGTACGTGCATAGAACACAACTTTATTTACATAAACAAAAGTGTATTGCTAAT
ATTATATTTTTAAGCTTTTACTGGCTATGAACTTAGATCTTCAGTGTTATTCGAGTTAGG
ATGTAAATAGGAGCTTATAGAAACAAAATGTCAGCAGCCCCAGAAACACTGCCACCACCA
AGTGCTCAAGCTCACACGCCGGCCAGGCCTACTCATATGTCCGCACCTCGACGTACGCCG
GGTAAACACACCGTGCATTGGTTCCGGAAAGGATTGCGAATCCACGATAACCCCGCCCTT
CGAGAGGGCATTATAGACGCTGTCACATTCCGATGCGTCTTTATAATAGATCCATGGTTC
GCCAGCTCTTCAAACGTTGGCATAAACAAATGGAGATTCCTATTGCAATGTTTAGAGGAT
TTAGATAAAAGTTTAAAGAAGCTTAATTCGAGGCTATTCGTTGTTCGCGGTCAGCCCGCG
GATGCGTTGCCAAAATTGTTTCGAGAATGGGGTACAACAGCATTAACCTTTGAAGAGGAC
CCTGAGCCTTACGGCCGCGTACGCGATCACAATATTATATCTAAATGTCGTGAAGTTGGC
ATAACAGTGACCTCTCGCGTCTCACACACTTTATACAAATTGGACAAAATAATAGAACGC
AATGGTGGTAAAGCTCCGTTAACATATCATCAGTTCCAAGCGTTAATCGCCAGTATGCCG
CCCCCTCCACCGGCCGAAGTTACAATAACTCCGCAAATGCTCAATGGAGCCACTACACCG
ATTACTGATAATCACGATGATCGTTTTGGAGTCCCCACATTAGAAGAGCTTGGATTCGAA
ACCGAGGGACTAAAGCCACCAATATGGATAGGCGGAGAAAGTGAAGCTTTAGCCAGGTTA
GAGAGGCATTTAGAGAGAAAAGCCTGGGTGGCTTCATTTGGAAGACCCAAAATGACACCG
CAATCATTGCTGGCGAGCCAAACGGGACTATCACCATACTTAAGATTCGGATGTCTGTCG
ACCCGATTGTTTTACTATCAATTGACGGAATTGTATAAAAGAGTGAAACGGGTGCGGCCT
CCGCTCTCTCTTCACGGACAAATATTATGGAGGGAGTTCTTTTACTGTGCTGCGACAAGA
AACCCAAATTTCGATCGCATGGAAGGAAATCCTATATGCGTTCAAATACCTTGGGAGAAG
AATCAGGACGCTCTAGCGAAATGGGCAAATGGGCAAACCGGATACCCTTGGATTGATGCC
ATAATGATTCAATTACGAGAAGAGGGCTGGATTCACCATTTATCGCGACACGCTGTAGCC
TGCTTTTTGACAAGAGGAGATCTTTGGATTTCATGGGAAGAAGGAATGAAGGTGTTCGAT
GAGTTACTCCTCGATGCAGACTGGTCGGTGAACGCAGGCATGTGGATGTGGTTCTCCTGC
TCGTCGTTTTTCCAACAATTTTTCCACTGTTACTGCCCTGTGCGTTTTGGAAGGAAAACC
GACCCTAATGGTGATTTCATAAGGAAATACATACCGGCTCTGAAGAACATGCCAACGCGC
TACATACACGAGCCGTGGATGGCCCCGGAGTCTGTGCAGGCGGCCGCCCAGTGCAGCATC
GGACGTGACTACCCCATGCCGATGGTCGACCACACCAAGGCCTCGCAGATAAATATCGAA
CGGATCAAACAGGTCTACGCACAACTCGCCCGATATAAGCCTCAAGCTACGCTAAATGCT
AATGCAGTCCAGCGACCCAACGTGTTGCAGTCGTCGCCAAGTCCGACATCAATAATCGCC
AGCATCAACCAGTCCAACTTCTTGTGCAGCCAAACTCCGGATCCACAAAACGCTACATCG
CATTCGTTCAAAGAGCCGTCAGACACATTCCCAATAAACAAAAAAACAAAGATACCGAAT
CGAACCAAACTCGCTACAAACGAGTAATTATCGTGCAAAAAACACGCAATTCTAATGTGG
AAATTAATGTATCCGCTCCACAAGATCGGAGAGCTTCAGATAATTATATCACGATTAATG
AGGGAGATCCTGCACACAGTACAGACGCAAAAAAACAAGAAAATAATTACGATTTCAAAA
ATTTGGCTATCGACAATCATATCCGAGGGTTTAATAACATTCAAAATATAAATTCTCAAT
ATTATTTAACTAATTATTCTACTAAGAAGAAAGAAACTGAAATAAAAAATGAAACAGACG
AAGGTCCATTTGTGCGCCCGGAAAGTTATGGCACAGACAGGGCTTACACAATCAACCGTT
GCCCTTCCATGTCAAATGAAAAAGAATTTGAAACGCCCAAAGAAAATCTAAAACAATAAA
ACTTGGAAAAAAAAATCGTTTTGGAATAAATAAAAAATATTATACAAAATAAATAAAGAT
ATACACAAAACAAACAATACATAAAGTTTTTTTTAAATTAAAAACGTTCACTGCGACTAG
GTGAGATACGTGAAACATTTATTACATACATTTTTACATTTCAAATACCTGGCATCTCAA
AGAGTAGAATCCTTAAAAGCATTTTTGATAAAATTCTTTTACCACCTGTGTTTTTTATTC
AGATGCTTCTCGTAGGGGTATAGAGCCTTCAAAAGTTTATCAGTTATAGGGCCGATAATC
GCCTAAATAAATGAATTCATGACATTCGGAAAAACACACAGGAAAAGTTATACCTTTGGG
TTTTTGTTATTAGATCACGGAACCCAGAAAAGCTCTGAAATCTGTATCTATCACTACAAC
TTTGAATATTTTAGGTTGATTTTTTTGGTGTGATTTATTTAAAATATTTTGATAGTTTTT
TTTTAATGATTTCGTTCTGAACATACTTAGTGATAGGAAACGTAAATTAGATGTTTTTAA
AATGTACATTTAAATATTATGTAAGAACTAGTAGTACTATGAACTAGTTTATGTATACAA
GTTTATATTTCAATTTGTAGTGAATAACACAAAATTATAATAATATTGTTAAATTTCTGG
ACCGGCAATAGCAACATAGAGCAGAGCGTCCGAAGATGTTGCATCATCACCAATATTTAA
CTGCTTTAAGAACAGGCTCGAACGATTCTCCAAATGTCTGTCCGCCTTATTAAGCTTATT
AAGCCACAAATAATCATCTCTATGTTCGAGAAAGAGCAAGCAAACCATTAAACAAATTGG
TGTTTTTTAAGCATGCGGTAGGCAGCGGCTTGGGTCTGGCCCTGGCATTGCCGACGTCT
(3359 bp)

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