SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39497_c0_seq1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		PREDICTED:_huntingtin_[Bombyx_mori]
Ontology
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007417 P central nervous system development
GO:0008134 F transcription factor binding
GO:0014069 C postsynaptic density
GO:0030136 C clathrin-coated vesicle
GO:0030424 C axon
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0048513 P animal organ development
GO:0051028 P mRNA transport
GO:0071598 C neuronal ribonucleoprotein granule
GO:1904580 P regulation of intracellular mRNA localization
GO:2000117 P negative regulation of cysteine-type endopeptidase activity
Transcript
Level		FPKM:2.83 TPM:2.23
ORF EntryO_BomoMG13586_internal:A_BomoMG_comp39497_c0_seq1
Sequence
(Nucleotide)
CGTTGACCTCGTTAGTGCACGTGGAGGCCAACACGTATTGGCTGTGCAGGGTCAATCTCT
GTAAGCTCTACGAAAGGATACCGTATAAGAGATTATTCACACTGTATCCGGGGTATCGCG
CTAGAAGTCGAATGATAATGAACACGTTGATTGGTCTGCTCCGCGACCCGGATCAGAAGG
TCAGGAGTGCCGCAGCGCACGCCATAGCGAACGTTATACCAACGATATACCCGCGAAGGA
GACACACGCCGGCCACAATGGTAACTGAGTTAGCTAAGGAGTTAACGGACGAGGTGTCTT
TGGATAGAGCGACGCTGTCGTTGCAAATAGTACGCGACATATACTTCTATCACGACCTCC
CTCGGCAATTGACCGAAGGGAACAGAACGGACGGCGACACCCTCAAGATTGTTGTCGGAG
ACTTAATGGGTAGACTGATGGCCAGCAGCTGTAAACATTATTCGCAAGGCTTACTGGAGG
CGCTACAAGCGATACTAATCAAGTGGACTCCTTGGAAACACATAGACGCCTACTCCGGTC
AAGGGATCCTGGGCTATTGTCTAGATAACCTGGACTATTGCAACACGAACGTTTCTATGA
GGACCCTTCTTCTGGACCTGTGCCGTTTGATTTATCCAGTTGAAGTGCACAACATAATGC
GCAAAAGGACTGCTAGTAGAGATATATTTGAACGCGATTCGACTAGTAAAGGGAAGTGGC
AACACCTCGACGGCGACAGGGTTGCCAGCTTAGCAGAGAAATTTCTCCAAGTAACATTGA
AAATGCTGAATGTATTGGTTCATCTGATTGAGGAAGTTAATCCCAATGTACATTTGAATA
AGGGCGGGATTGCCCTTCCCGGGAGTCCGGTTCGAAGGAAAACTCAAGATTCTATTCAAA
CTCGGAAGAATTCGACGGCGAGTGAAAGCTTAGATGACAAAGCCTCTCTAAAACGAAAGC
CTTTAATGCCGGCAACGAGCTTGAGAGCGAACTTTGTGGGACACTTTTATAACGAACCGT
TCTATATGAAATTGTACGAGGGCTTAAGAGCAGCTTATTCGAATCATAAGATAAATCTCG
ACCCTAAATCGAGCATATTCCACACGTTTCTATCGACCACTCTGGACTGCCTCGCCGTGC
AACTGGAACTGTCCACCGAGAAGGAGTTCGGCTCCGTCACAGAAGAGATCCTGTACTACC
TCAAGGCAATAATGCCCTTATGCGCCGACAATACGGTCTATTGTGTGACGCAGCTGTTGA
AATGTTTATTCGGGACGAACATGGTGGCGCAGTACGACGATTACATGAGCATCAGCGACA
AGAATGAGGGCAGCCGGCAGACCAGCTTCTGTGAGGACGTGTGGACTCGCGCAGACCACG
GCTCCAGGAGGAGCAGCGTCGGCTCGAATGCGAGTCAGAAGCTGTGTCTGGACATCAAGA
ACCCCAGGATGGCGGCGGAGAGGCAACTGCTGATCGCGCTGGAGAATTTCGCCAAGAACA
AATCTGATAGGAAGTGGAGTACCAATAAGGAGGAGCTGGAGAAATATATTAAGTTATTTG
AACCGGTTGTCATACAGTCTTTGAAGAGCTACACAATGCAAAACGACATTCCACTCCAGC
GCCAAGTGCTAAGTCTGCTGAACCAACTGTTGACCCTGAGGGTGAACTACTGCATGCTGG
ACAACGATCTGATCTTCATAGGCTTCCTGATGAAACAACTAGATTTATTCGAACAACATG
AAATACCGAATTGTTGCGATTTGGTGAACAGCATCCTCATGTTTTTGGTGCAACTGTCGT
CTTCCAAGCATCACACGAAGAAGATCATTGAAATACCGAAATTAATCCAGTTGTGCGATG
GTCTGATGGCGTCGGGGGCCCACGCGGAGTGCATCGCCGGTCTAGAACCCGTCGCTGTCA
AAGTCTTCAGCAGTATGGGAGGTAACGTGTTAGGCCGAGCTCAACAGCAAGAGGCGCAGG
CGACCAGAGAAGTGCTCTTCTATATGCTGCAGAAGACCATGCATCAACAGAAGGTGCTAG
AGCTAGTGTCGTGTATACTGTCTCTGACGCAAGAACACCCGGAGAGCTACTATCGATACT
CGGAGCTGGCCACCGACACGTTGCTCAACTTGTTGTCTCAGAGGTCTGTAGAGCTGGACT
CATGTCTAGCAGTGTCGGCGCTAGAGCGATTGCTAGAGACGGTGTATAAGGACGTTCTGC
TAGAGCAGAGCCGGGTCGAGGTGCTACTGAAGATTCTGTTTAAAGCACCACCAGATCAGT
CCACAACGCCACCGAAGCTGAAACTCCGCTATCTATCAATAATAATGGTGCTACTAAGGA
AGGTCCTGGTACTGATACCGGAGAGCGAGATATTATTATCGATCAACTACTTGAAGTCGA
CCTGCGTGTCGCCGCAGTCGATCTTCTTCAACGCGAAAGCGGACGTGGACCCGCTCAACG
TGCTCAACGTGAACGAGAACTGCGCGAATCTGTCCCCTGACGTGGTGCTCGTAAGGTTCC
TTTTCAAAACGCTGACTTACGCCGTTACGGAAGTGGAGAAGAATTACGAGCCGAATCCGA
AGTACGATACCGACGAGAACAGGTTGCTGTATTCCGTGTGCGTCAACATCGTCGTGCAGG
TCAAGCAGATGTTGCATTTGACTACTGGCTGCCTGTTCCCTCTGATATCGAAGACGGCGC
AGAGTCTCCTGCACAACGAGCAGAGCGGCCTCAACACGGGCCTGTACAGTCCGGACGAGA
ACATTCCACTCGACACACTCAACATGATATGCCTACGAGCTGCCCACGCGCTGCCCCTGC
TCACCGCGCACTGGTCCCATTTGCTCATCAGATTGAACTTCCTGACGCACAAGTATTGGC
AGAAGCTGGTCGGCTTCGTCCGCAGCTTGCCGCTGGGCGCCGGCGGCGGGCTCGCGGCCC
CGCTCAGGGTCGACGTGCTGCAGATAGCCTGCGTCATGGCTTACTGTGAATATTTCGTAG
AAAACGGTCTCACCGAAGCGGTACATCTAACCTGGCTACTGGTGAACAGAGTTCATATAC
TAGTCAGTCAGTTCTCTCAAACTCTGGTCCAGGGTCTCATCTCCAGAGTTCAGCAGACGA
GTGGAGCGTCCGGCTTGCTGCTGCAGGCCATCGCCGCTAGATGTCAGGGCTGTTTGAAGG
ACGAGTTCGCTTTGAACGTGTACAAGATCCTGTCGTTTTGCCACGAGAGTCAGTCCGGGG
CGCTGGTGTTCCTCATATGCCGGATCATCGGGAAACTGGAGCCCGCCATCGCGGTCAAGT
TCGCAAAACTGGCGATAGAACGTTGTCGTGCGCTCAAAGACGTGCCGCCCGACAATATGA
ACGCGCAACTATCGAAAGAGGACGTCCAAGTCGCGTTGGAGCTTTTGCAGCGGGACAAAG
TTCACGTCAGGTACCCGGCGCTGGTGATGGAATTAAACTCTTTAGCGTCGAGCGTGTTCG
ACTTATCGCCTCTCGACTTGTCGCAGGACCGAGCGATCAACCCCCAGCACGTGCTGACCA
CCAATGTCGATTCTGGCTGGCTCTTGAACCAGATTAAAAATAGATGCTGCAGGTCTGACT
GTGTCCCGCCGAAGATGTCGAAGCACAACCACCTGGCGGAAATACTCTCGAACCTCTCCC
ACGAAGATGTGAGCACCGTGATGTCATGTCCGGAATTCGAAAGGAAAATTCTATGTTCGG
CATTTAAAGTGGCCAGCGACAGCTACTTGAGAGAGTTCCTCAATGTCTACGCAGAATACG
AAAGGAAAGAGCTAGAGAAAGATAAGGCAAGAGAACGAATCGGCTTGAAGAGGGATGAGG
AGATGACGTCATCGATCGACAGCAACAAACTAACAGTCGCGAACACGCTGCACGTGTTCA
AGAAGAGCGACAACAAGGAATCGAAATCTCAATTCTTCATACCGATAGCGGACAACGAGA
AGGAGTTTGGGAATTTGCAGCTTACTGACGACGAAATAGAGTTGAGTTTGCCGGAGCTGC
CCGTGATGTACCGCGTCGCGTTATCGACGTTCGACAGGTCCCTAATTGAAGTTATACGGC
TGTTCCCGAAACAGAACCGGCCATTGAGCCAGTCGGAGAACTTTGACTTGAGCGTTGAAC
ACACAGTGGACCGTTATACGCGCAGATGCCACCAAGTGTTCCAAGACAAGCTGTTTTACC
ACGAGTACGTGACGCTGCAGACGGTACTGACCGGTTACTTGGACGCCGCGACCAGAATAA
TGAACGCCATAGACGAGGCCGACTGTGATCTATTAGAAAAATGCATCGAGAACATTCTGC
CGCTGACAATAGCCAAGAATATTTCGGTTTTTTGCGTCATTTCCCTGCAGTACCTGTCGT
TTTTGATTAAGAACAAGAGTATTGTCGAGTCGCCCGTGCACGCGGACGTCTCGTTTCGGG
CCACGGACGCTGCGACCCGGCACGTGACAGTCGACAGCCTCGTCGCGGTGACAGTCGAGA
ACGTGTCAAAAGCCTTGGCCGTCAGAGAGATCTGGATGGAGTTGAACGCCGATAGCAACG
CTAATAGAACCCAATCGGCGATCAGCTGTTTATACGCCGTCGTCAAGTACTTGGTCAAGG
ACACAAAACCTCTCGTCCTAAAACATTACATGCGAACTGACGATTCCGGTCCAAAGCCGG
ATATACTAATAACCGGCGATAAGCTGGTCACCCTTGTCGAATACTGGGAGGACAATTTCT
ACGCCGGTCATGGATATGTGATGCCCAAATGCTATAAAAAGCCGTTGGAGAGTATGCTTG
TCAGTTTGGCCAGATTAGATGTTGTGAGTAACGTGGCGCTTATCCCACCGATAGCCTGGT
CGACAGTGGAGGTGGCCATGAAAAAGGACCAACTGCAGAAGATAGAGCTTCCGCTTCAAG
CTCTCCAGGATCAGGATGTTCTGGAAGCTTTTCTATTCAGGGTCAATCTGATAGGCTGGT
CGAACAAGAAGCAGTTCGAGGAGATATGGGTGGGGCTGCTGGGCGCGCTGCAGGGGAACG
GGCCGCACTGCGCCGTGCGCGGCG
(5064 bp)

- SilkBase 1999-2023 -