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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39486_c0_seq3
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_Bloom_syndrome_protein_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000403 F Y-form DNA binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000733 P obsolete DNA strand renaturation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009378 F four-way junction helicase activity
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:0044237 P cellular metabolic process
GO:0045003 P double-strand break repair via synthesis-dependent strand annealing
GO:1901291 P negative regulation of double-strand break repair via single-strand annealing
Transcript
Level		FPKM:0.84 TPM:0.66
ORF EntryO_BomoMG13548_complete:A_BomoMG_comp39486_c0_seq3
Sequence
(Nucleotide)
GAAATTTTATTTATCCTGAACCCTAGCGCGTATTAATATTTGTAGTGTTCGCAAGTACCT
AACCTATTATATTACACAAGCCATTACCTCTTCCTCACACCGGCCTTATAGTTCCACCTC
GCACGGCCGCTCCGCGCGGAGGTGTTGGTCGGCTGGCTAGGTCCGGGCCGGGACCACTCC
GATTCAGATCCAGACGTGTTTTCGTCATTTTCTTTTTCCTCAATTGTTTCTTTTTCATAC
TGCTTTTGCAATGCCGTCTTCTCGTCTGCGTAGGCGGCCGTGACCCGCAGCAGCGCGTCC
CCGAGGCGGCGGCGCGCGACCAGCGGCAGCTGCGGCACGCGCTGCAGCTCCTGCGGCGTG
CGCGGCAGAACGCGTGACGTCATGCGCAGCGCCGCGTCCGCCAGCGTCGCGCCGCGCTCG
CGACACACTTCCACCAGGTCAGCATAGCACCTGAGCTCGAGCTTGGCCAGCGTGGAGTCC
AGGTCGCTGGCGGGGGGCGCGGGCCGGGCCTCTGCGGGAGCTGTCGTTAAACTGTTCTTG
TCGGTTGTCTTCGACATGGGGAACACTATGCGGATGCGATTTTTCATGAGTTTGTCCGCG
TTCGGTCCCAGGTCGATATATCCGCTGGCGAAGTCGTTGTTGACGACGATCTTCTCGTAC
AGAACCCCTCGAACCACCAGCAGCCGCAGCAGGCGCTGGGCGTCGCTCCGGTCCCACGAC
TTGCAAAGTGCGTGCACGGGCGAGTCGTGCAGCGCGGCGAGGCGCTGCAGCTTGGAGCCG
CGCAGGGCGGCCGCGAGGTGCAGCAGCGTGAAGCCGTTCCGCGACCGGGTGCCGGCGTCC
CTCACCGCCTGCACGATCTTCTTGCAGTGCTCCGTCACGTCCACCGGCTCTGTGCGTTGT
GTCCGCAGACAGTTGTCGCAGGCGGCAGGGTGGGCAGGGTTGCAGCGCGGCAGCGTCTCC
CCGAGGTAGGCCAGGATGAAGGCGCGGCGACACTCAGTGACACTCTCGCAGAGCTCCACC
ATACGTCGCAGGTTCTCCTCTTGGACATTGCGCGCTTCTGTCCTCATTTCCGACCTCATG
TTTAATTTTCGATGTCTGATCATGTCCTGGTAGGAGTAGTACAGGATGCAGGTGGCCAGT
TGCCCGTCCCTCCCAGCGCGACCTGACTCTTGGTAGTATCCTTCTATGGACTTGGGCATG
CTGTGGTGCATGACGTAGCGGACGTCCGCCTTGTCTATGCCCATTCCAAACGCTATGGTC
GCACAGATCACTTTAATCTCGTCGGCGATCCAGGCCGACTGCACGCTCTGCCGCTTGGAG
TCCGCGAGCCTGGCGTGGTAGGGGGCGGCCTGCACCCCCGTCTTGTGGAGGTCGCCCGCC
AACACTTCGCAGTCTTTGCACGATAAGCAGTATATTATGCCAGATTCCCCGAAAAATTCG
TTCTTTATGAGCTTGGCGATCTCCTGGTTAATGTTCTTCGGTTTCTTGTGGAAGCGGTAG
CGCAGGTTGGGGCGGTCGAAGCTGCACAGGAACCAGCGGCAGGCGGCGGGCTGCACGTGC
AGCTGCAGCAGCACGTCGCGGCGCACGCGCGGCGTGGCCGTGGCCGTCAGCAGCACGGCG
CGGGGCGCGGGCCAGCGCGCGCGCACCAGCCGCAGCGCCGTGTAGTCGGGGCGGAACTCG
TGCCCCCACTGAGACACGCAGTGCGCCTCGTCTATCACGAACCTCGCGAACTTCCCTCTG
GCGTCGAGCGAGTCGAGGACGGACTGGAACCGATCGCTGCCGACGATCTTCTCGGGGGTG
ACGTACAGCAGCTTGATGGGCGGCTCCTTCATGGACAGCTTGTGGTAGATCTCGTCAGTC
TCTGCGAGCGACGTGTTGCCGGACAAGTCGGCGGCCGGGACGCCGAGCGTCTGCAGCTTC
CGGACCTGGTCCATGATAAGGGACTTCAACGGCGATATGACGATGGTGACGCCGGGCGAC
AGTACAGCGGGCAGCTGGTAACACAACGACTTACCGCCGCCGGTCGGCATGAGGACGAAG
CAGTCGTGGCCGAGCAGCGCCGCGTTGATGGCCTGCAGCTGGTTGGGCCGGAACTTCGTC
AGGCCGAACGTCTCGCGGAATATCTCCAGCATCGGAGCCGAGTGAGGGTAGTTCAGGCCG
TCGAACTCACCTGTGGTTCCATCGTTCTGGATATCACCTTCGAATTGCCCGATCCCTTCG
TACTTCGTATTCACGACATTCGACGTCATCGTATGGTTCAAGTTCATTTCCACCATCTCG
ACGGCATTAACGACTTCCACGTCGTCCGCGAAGTCCCCCATTCTGTACTCCGGCCATCCG
TCATCGTCGACGCTTATGTTCTTACCGTTCTGAAACTCTTCGACGCTGACGTCATTTTCA
CTAATCAGGTCAATGTTCTCTTCGAAGCCGTCACTGGCGTCAAACAAGTGTTCGTATTCA
TTTTCGGCGACATCAGTCACAGATGCTGGTGTCGCCGATGTTGACGGACGTTCCGTGTTC
AAGAACGCGCTTCGGTCAAGCGGAGGCGGCTGGAATTCTACTGAACTATTATTCGCTTGC
GGCGTTGGATTGGACGCAACCTTAGGTGGGACGCGCTTCAGAGTCTCCATGATGCTTTTA
AGTCTCTCCGCTGTACTCGACGAAGCTATACAATCCGGCGAGCTATGATTTAATGGGGAT
TTGTATACAAATTTTCCTTTCTTCTTGACATTCGTGTCTGATTGATCTAAGCTTTTATCC
ATCGTCGAATCATTGGTTACAGACATAACAGACGGTGATTCATTTGAAGTGGTGACTTTT
TTAACATCTGAATGTATCATATTACTGGTCCCAGGGTTTTGTTCTAAAGGCGGGGTTGAA
TTCTGTATCAAACTATTACTATGATCCTTCTCTGTTGTATGTAATTTATCTATGGAGCAA
CTAGATTTATTCTCAAAATTATTGCAATATTTTTTTATTTCTATTCTGCTCCGTTTCATC
TTGTCGTGTATTTTACTATCATAACCAGGAATTATTTCTAGCAAATTCTTTGGAATTCTA
TCAAACGTGTCACTTATTGTTTCTAACAATTCGACGTACATTCTTTCACTTTGCCGATCC
AGAAATTCGGGATGATTTTGTTTCTGTTTCGTTTCCTTTACAGCAACATGTGCTGTTATT
CGATCTAGTAGAGGTACAAATGAGGCATTCATTCGTAAATCTACATCATTAAGGTCATCA
GACATAGCCAAACGGCTCCTTTTACTCGAGCTGTCCATGTCTACGTTTTTAGGTGGGGTT
GGTATGTCAACCACTATACTTCTTTCAGGACTATTGACTCCGGTTTCGTATCTTTCTGGA
ATTTTCGGAGAGTTTTCGTCTTTAACTGAACTGACAATCTCCAATGTCTTGAATGGTGGT
GTCCCTAGAATTATGAAATGTAAAATTTATTGTGATACTTTGATTAATTTTTAATTCTAC
AATATTTTTAAATATATTTTGCTAACATTGTCCACACGTCGTGGTCGGGACGCTGAATAG
CACGTTTG
(3548 bp)

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