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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39481_c1_seq3
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		Vam6/Vps39-like_protein_[Papilio_xuthus]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0034058 P endosomal vesicle fusion
GO:0097576 P vacuole fusion
GO:1902774 P late endosome to lysosome transport
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:7.48 TPM:5.91
ORF EntryO_BomoMG13542_3prime_partial:A_BomoMG_comp39481_c1_seq3
Sequence
(Nucleotide)
CAAAACTTATGTATTCATACATTGCTTGTCATCATTCATAAAAATATTATTTTTTGTTTC
TACTTGGTATTTACAAAAGCTTAATGTAATAAACCATAATATATCCTCCGCTTGTAGATG
CACCAAATTCACTTTTGGCAATTTTATTATGGGTATTCGAAAAAAAAAGGATCTTGATAA
ACACAAAGTCATAGTTTCCTACGAAATGGGAGGATTCAGATTCGTGTAAGGTTTTCATCT
AAACGAAATTGTTTTGTTGTTTTAATTACAAAATTGTGTAAAATGCACGAAGCGTATGAA
GTTTCACATCTGCTTAATGCCACCGTGCAGATCGAAGCAATAGCTGCATTCGAGAATAAC
CTATTATTAGGTACGAGGCAAGGCCATTTATTGATGTACTCTTTATCAACAAATAATGAA
GAGCAAAAGTATCAGGTACATTTGTTAAGATACAGGAAGAATTTTAGCAAAAAACCTATT
CAGCAAATTGAAGTTATACTGGATGAAAATCTATTATTATGTCTGACAGATTCTACACTA
GCTACATACAACATTAATGGTGTTAATTTTCCATTAATAAAAACTTTTGAACAGACAAAG
GGTGCTTCACTTTTTGCTTTGGATTGTAAGGTTTCATCAAGTAATGGTGCAGCGTCATCT
GATGTTCGTCTTTGCGTTGCAGTAAGGAGGAAACTTCAAGTGTACTGCGGGAGTAAGGGT
GAATTTAAACACATGCTAGATCTAAATATACCAGATGTACCAAAAGTAATGGCCTGGGGT
CTGCAGTATCTATGTGTGGGATTTAAAGCAGAGTACACCCTATATGATGTGTCAGATGGA
AAACCAAAAGAACTATTTCCCACAAGTAGTTCTAAATCATTAGAGCCAACTATTTCTAAG
TACACAGAGACATCTTTCCTAGTAGGACGTGACCAAACATCGGTTCTTATAGAGGAGTCT
AATAAAAATGTCGATATAAAGAAAACTATTAAATGGAAGGAGGCGCCTCTTGCTGTGGTG
TGGGATCAGCCGTTTGTACTGGGTCTATTGCAAGATCAAGTTGTTGTGCAGACTGTGGAG
CCAGCGTTTTATATACAATCATTGTCCGAATTGAATAAAGCAAGACTGATGTACAGATGC
AAACGAGGCTTAATATTCGTGGCCTCCGTCGGGCAGGTGTGGTGTCTCAGCTTAGTCGAC
ATAACGAAACAAAGGCAACAGCTACTGAAAGACAAACAGTTCCAAATAGCTATAGAGTTA
ACTACGTTGTCACAATGCTCGCCCGAGGAGAAAAAACAAAAAATACATTCCATACAAGTG
CTGAATGCACTAGAAGACTTCGACAACAAATGTTACACGCAAGCGATGCAGGAATTCGCC
AAACTAAACACCGATCCGGCCGATGTCATCAAATTGTTTCCTGAACTAGACGGCCGTACA
GACGGCGAGAAAAGTGGAAAGCTGAAAGGGAAAGATTTAGAGAACGCTCTGAACGCACTT
ATACCGTATTTAGTTGAGTTGCGAAGAAAGATCGGCAAGGGCAGTCCCGAACCTAACGGG
TCTCCTCCGCAAGAGGGAACCAGCCAAAGAAACGTCGCTCAGCAGATGGAGTTGATTGAT
A
(1621 bp)

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